Dataset Viewer
The dataset viewer is not available for this subset.
Cannot get the split names for the config 'default' of the dataset.
Exception:    SplitsNotFoundError
Message:      The split names could not be parsed from the dataset config.
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 286, in get_dataset_config_info
                  for split_generator in builder._split_generators(
                                         ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      StreamingDownloadManager(base_path=builder.base_path, download_config=download_config)
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/hdf5/hdf5.py", line 58, in _split_generators
                  with _safe_open_h5py(f, "r") as h5:
                       ~~~~~~~~~~~~~~~^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/hdf5/hdf5.py", line 390, in _safe_open_h5py
                  f = h5py.File(file, mode)
                File "/usr/local/lib/python3.14/site-packages/h5py/_hl/files.py", line 555, in __init__
                  fid = make_fid(name, mode, userblock_size, fapl, fcpl, swmr=swmr)
                File "/usr/local/lib/python3.14/site-packages/h5py/_hl/files.py", line 232, in make_fid
                  fid = h5f.open(name, flags, fapl=fapl)
                File "h5py/_objects.pyx", line 54, in h5py._objects.with_phil.wrapper
                File "h5py/_objects.pyx", line 55, in h5py._objects.with_phil.wrapper
                File "h5py/h5f.pyx", line 106, in h5py.h5f.open
              OSError: Unable to synchronously open file (file signature not found)
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/split_names.py", line 68, in compute_split_names_from_streaming_response
                  for split in get_dataset_split_names(
                               ~~~~~~~~~~~~~~~~~~~~~~~^
                      path=dataset,
                      ^^^^^^^^^^^^^
                      config_name=config,
                      ^^^^^^^^^^^^^^^^^^^
                      token=hf_token,
                      ^^^^^^^^^^^^^^^
                  )
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 340, in get_dataset_split_names
                  info = get_dataset_config_info(
                      path,
                  ...<6 lines>...
                      **config_kwargs,
                  )
                File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 291, in get_dataset_config_info
                  raise SplitsNotFoundError("The split names could not be parsed from the dataset config.") from err
              datasets.inspect.SplitsNotFoundError: The split names could not be parsed from the dataset config.

Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.

RNA-SE: EternaBench-CM data

This dataset repository provides EternaBench-CM structure pools, precomputed RNA-FM features and raw chemical-mapping data prepared for RNA-SE, an RNA secondary-structure model combining a VAE with a diffusion transformer (DiT).

Download: CM_data.zip

Code, configurations and usage instructions: RNA-StructEnsemble on GitHub

Contents

The archive contains six files under EternaBench_CM/:

File Contents
dit_train_top1_K20_N10.h5 Training sequences, structure pools and metadata
dit_val_top1_K20_N10.h5 Validation sequences, structure pools and metadata
dit_test_top1_K20_N10.h5 Test sequences, structure pools and metadata
rnafm_fp16/official_cm_rnafm.safetensors Shared training and validation features, indexed through source_row_index
rnafm_fp16/offical_test_rnafm.safetensors Test features, indexed through split_position
EternaBench_ChemMapping_Filtered_10Jul2021.json.zip Raw chemical-mapping JSON data retained as a nested archive

Each RNA in the structure pools retains all 20 selected structures, including duplicates. The spelling of offical_test_rnafm.safetensors matches the supplied configurations and should be preserved.

Local layout and use

Place the archive contents in the GitHub checkout's data/ directory. The resulting directory is data/EternaBench_CM/; the archive already contains the EternaBench_CM/ level. Preserve filenames and subdirectories.

Use the linked GitHub code to read these files. This archive does not provide automatic loading through Hugging Face datasets.load_dataset. Model weights are distributed separately in checkpoints.zip.

The raw JSON archive does not directly replace the prepared chemical-mapping evaluation HDF5 required by the evaluation workflow. That evaluation HDF5 is not included in this bundle.

Sources

The raw JSON archive was obtained from the official EternaBench repository, which carries an MIT license and separately documents data sources. Features were computed using RNA-FM.

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