The dataset viewer is not available for this subset.
Exception: SplitsNotFoundError
Message: The split names could not be parsed from the dataset config.
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 286, in get_dataset_config_info
for split_generator in builder._split_generators(
~~~~~~~~~~~~~~~~~~~~~~~~~^
StreamingDownloadManager(base_path=builder.base_path, download_config=download_config)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
)
^
File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/hdf5/hdf5.py", line 58, in _split_generators
with _safe_open_h5py(f, "r") as h5:
~~~~~~~~~~~~~~~^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/hdf5/hdf5.py", line 390, in _safe_open_h5py
f = h5py.File(file, mode)
File "/usr/local/lib/python3.14/site-packages/h5py/_hl/files.py", line 555, in __init__
fid = make_fid(name, mode, userblock_size, fapl, fcpl, swmr=swmr)
File "/usr/local/lib/python3.14/site-packages/h5py/_hl/files.py", line 232, in make_fid
fid = h5f.open(name, flags, fapl=fapl)
File "h5py/_objects.pyx", line 54, in h5py._objects.with_phil.wrapper
File "h5py/_objects.pyx", line 55, in h5py._objects.with_phil.wrapper
File "h5py/h5f.pyx", line 106, in h5py.h5f.open
OSError: Unable to synchronously open file (file signature not found)
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/split_names.py", line 68, in compute_split_names_from_streaming_response
for split in get_dataset_split_names(
~~~~~~~~~~~~~~~~~~~~~~~^
path=dataset,
^^^^^^^^^^^^^
config_name=config,
^^^^^^^^^^^^^^^^^^^
token=hf_token,
^^^^^^^^^^^^^^^
)
^
File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 340, in get_dataset_split_names
info = get_dataset_config_info(
path,
...<6 lines>...
**config_kwargs,
)
File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 291, in get_dataset_config_info
raise SplitsNotFoundError("The split names could not be parsed from the dataset config.") from err
datasets.inspect.SplitsNotFoundError: The split names could not be parsed from the dataset config.Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
RNA-SE: bpRNA data
This dataset repository provides bpRNA structural data and precomputed RNA-FM features prepared for RNA-SE, an RNA secondary-structure model combining a variational autoencoder (VAE) with a diffusion transformer (DiT).
Download: bpRNA_data.zip
Code, configurations and usage instructions: RNA-StructEnsemble on GitHub
Contents
The archive contains six files under bpRNA_1m/:
| File | Contents |
|---|---|
bpRNA_train_one.h5 |
Training sequences and reference secondary structures |
bpRNA_val_one.h5 |
Validation sequences and reference secondary structures |
bpRNA_test_one.h5 |
Test sequences and reference secondary structures |
rnafm_fp16/train_rnafm.safetensors |
Training RNA-FM features |
rnafm_fp16/valid_rnafm.safetensors |
Validation RNA-FM features |
rnafm_fp16/test_rnafm.safetensors |
Test RNA-FM features |
The HDF5 files support VAE training and reconstruction evaluation. DiT training and sequence-conditioned prediction additionally use the RNA-FM features and the indexing and filtering implemented in the code repository.
Local layout and use
Place the archive contents in the GitHub checkout's data/ directory. The
resulting directory is data/bpRNA_1m/; the archive already contains the
bpRNA_1m/ level. Preserve filenames and subdirectories.
Use the linked GitHub code to read these files. This archive does not provide
automatic loading through Hugging Face datasets.load_dataset; a missing
dataset preview does not prevent downloading it. Model weights are distributed
separately in checkpoints.zip.
Sources
Structural data originate from bpRNA-1m. Features were computed using RNA-FM.
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