| { |
| "fields": { |
| "source": [ |
| { |
| "value": "cossmos", |
| "count": 269735 |
| }, |
| { |
| "value": "arsma-dssr", |
| "count": 13429 |
| } |
| ], |
| "motif_type": [ |
| { |
| "value": "hairpin4", |
| "count": 63777 |
| }, |
| { |
| "value": "bulge1", |
| "count": 58992 |
| }, |
| { |
| "value": "hairpin5", |
| "count": 26513 |
| }, |
| { |
| "value": "hairpin6", |
| "count": 20495 |
| }, |
| { |
| "value": "bulge2", |
| "count": 20204 |
| }, |
| { |
| "value": "hairpin7", |
| "count": 17101 |
| }, |
| { |
| "value": "1x1", |
| "count": 10725 |
| }, |
| { |
| "value": "1x2", |
| "count": 6867 |
| }, |
| { |
| "value": "1x3", |
| "count": 5630 |
| }, |
| { |
| "value": "2x2", |
| "count": 5377 |
| }, |
| { |
| "value": "2x3", |
| "count": 5307 |
| }, |
| { |
| "value": "hairpin3", |
| "count": 5084 |
| }, |
| { |
| "value": "3x3", |
| "count": 4987 |
| }, |
| { |
| "value": "bulge3", |
| "count": 4749 |
| }, |
| { |
| "value": "1x4", |
| "count": 3562 |
| }, |
| { |
| "value": "hairpin8", |
| "count": 3185 |
| }, |
| { |
| "value": "3x4", |
| "count": 2912 |
| }, |
| { |
| "value": "hairpin9", |
| "count": 2633 |
| }, |
| { |
| "value": "2x4", |
| "count": 2216 |
| }, |
| { |
| "value": "bulge4", |
| "count": 1443 |
| }, |
| { |
| "value": "3x6", |
| "count": 1293 |
| }, |
| { |
| "value": "4x6", |
| "count": 1094 |
| }, |
| { |
| "value": "2x5", |
| "count": 1036 |
| }, |
| { |
| "value": "hairpin10", |
| "count": 867 |
| }, |
| { |
| "value": "1x5", |
| "count": 855 |
| }, |
| { |
| "value": "hairpin13", |
| "count": 832 |
| }, |
| { |
| "value": "5x6", |
| "count": 757 |
| }, |
| { |
| "value": "hairpin11", |
| "count": 697 |
| }, |
| { |
| "value": "5x5", |
| "count": 605 |
| }, |
| { |
| "value": "3x7", |
| "count": 517 |
| }, |
| { |
| "value": "bulge5", |
| "count": 487 |
| }, |
| { |
| "value": "5x7", |
| "count": 460 |
| }, |
| { |
| "value": "4x5", |
| "count": 437 |
| }, |
| { |
| "value": "4x4", |
| "count": 217 |
| }, |
| { |
| "value": "4x7", |
| "count": 193 |
| }, |
| { |
| "value": "6x7", |
| "count": 178 |
| }, |
| { |
| "value": "hairpin12", |
| "count": 178 |
| }, |
| { |
| "value": "7x7", |
| "count": 175 |
| }, |
| { |
| "value": "3x5", |
| "count": 157 |
| }, |
| { |
| "value": "2x6", |
| "count": 140 |
| }, |
| { |
| "value": "2x7", |
| "count": 117 |
| }, |
| { |
| "value": "6x6", |
| "count": 39 |
| }, |
| { |
| "value": "1x6", |
| "count": 37 |
| }, |
| { |
| "value": "1x7", |
| "count": 37 |
| } |
| ], |
| "loop_size": [ |
| { |
| "value": "4x0", |
| "count": 65220 |
| }, |
| { |
| "value": "1x0", |
| "count": 58992 |
| }, |
| { |
| "value": "5x0", |
| "count": 27000 |
| }, |
| { |
| "value": "6x0", |
| "count": 20495 |
| }, |
| { |
| "value": "2x0", |
| "count": 20204 |
| }, |
| { |
| "value": "7x0", |
| "count": 17101 |
| }, |
| { |
| "value": "1x1", |
| "count": 10725 |
| }, |
| { |
| "value": "3x0", |
| "count": 9833 |
| }, |
| { |
| "value": "1x2", |
| "count": 6867 |
| }, |
| { |
| "value": "1x3", |
| "count": 5630 |
| }, |
| { |
| "value": "2x2", |
| "count": 5377 |
| }, |
| { |
| "value": "2x3", |
| "count": 5307 |
| }, |
| { |
| "value": "3x3", |
| "count": 4987 |
| }, |
| { |
| "value": "1x4", |
| "count": 3562 |
| }, |
| { |
| "value": "8x0", |
| "count": 3185 |
| }, |
| { |
| "value": "3x4", |
| "count": 2912 |
| }, |
| { |
| "value": "9x0", |
| "count": 2633 |
| }, |
| { |
| "value": "2x4", |
| "count": 2216 |
| }, |
| { |
| "value": "3x6", |
| "count": 1293 |
| }, |
| { |
| "value": "4x6", |
| "count": 1094 |
| }, |
| { |
| "value": "2x5", |
| "count": 1036 |
| }, |
| { |
| "value": "10x0", |
| "count": 867 |
| }, |
| { |
| "value": "1x5", |
| "count": 855 |
| }, |
| { |
| "value": "13x0", |
| "count": 832 |
| }, |
| { |
| "value": "5x6", |
| "count": 757 |
| }, |
| { |
| "value": "11x0", |
| "count": 697 |
| }, |
| { |
| "value": "5x5", |
| "count": 605 |
| }, |
| { |
| "value": "3x7", |
| "count": 517 |
| }, |
| { |
| "value": "5x7", |
| "count": 460 |
| }, |
| { |
| "value": "4x5", |
| "count": 437 |
| }, |
| { |
| "value": "4x4", |
| "count": 217 |
| }, |
| { |
| "value": "4x7", |
| "count": 191 |
| }, |
| { |
| "value": "12x0", |
| "count": 178 |
| }, |
| { |
| "value": "6x7", |
| "count": 178 |
| }, |
| { |
| "value": "7x7", |
| "count": 175 |
| }, |
| { |
| "value": "3x5", |
| "count": 157 |
| }, |
| { |
| "value": "2x6", |
| "count": 140 |
| }, |
| { |
| "value": "2x7", |
| "count": 117 |
| }, |
| { |
| "value": "6x6", |
| "count": 39 |
| }, |
| { |
| "value": "1x6", |
| "count": 37 |
| }, |
| { |
| "value": "1x7", |
| "count": 37 |
| }, |
| { |
| "value": "7x4", |
| "count": 2 |
| } |
| ], |
| "symmetry": [ |
| { |
| "value": "hairpin", |
| "count": 141362 |
| }, |
| { |
| "value": "bulge", |
| "count": 85875 |
| }, |
| { |
| "value": "asymmetric", |
| "count": 33802 |
| }, |
| { |
| "value": "symmetric", |
| "count": 22125 |
| } |
| ], |
| "experiment": [ |
| { |
| "value": "ELECTRON MICROSCOPY", |
| "count": 197418 |
| }, |
| { |
| "value": "X-RAY DIFFRACTION", |
| "count": 77835 |
| }, |
| { |
| "value": "SOLUTION NMR", |
| "count": 7873 |
| }, |
| { |
| "value": "SOLID-STATE NMR", |
| "count": 20 |
| }, |
| { |
| "value": "nan", |
| "count": 18 |
| } |
| ], |
| "functional_class": [ |
| { |
| "value": "RIBOSOME", |
| "count": 219382 |
| }, |
| { |
| "value": "TRANSLATION", |
| "count": 15880 |
| }, |
| { |
| "value": "RIBOSOME/ANTIBIOTIC", |
| "count": 14017 |
| }, |
| { |
| "value": "RNA", |
| "count": 12441 |
| }, |
| { |
| "value": "TRANSCRIPTION", |
| "count": 2158 |
| }, |
| { |
| "value": "RIBOSOME/RNA", |
| "count": 1993 |
| }, |
| { |
| "value": "RIBOSOME,TRANSCRIPTION/TRANSLATION", |
| "count": 1712 |
| }, |
| { |
| "value": "ANTIBIOTIC", |
| "count": 1296 |
| }, |
| { |
| "value": "GENE REGULATION", |
| "count": 942 |
| }, |
| { |
| "value": "VIRAL PROTEIN", |
| "count": 929 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN/RNA", |
| "count": 865 |
| }, |
| { |
| "value": "SPLICING", |
| "count": 779 |
| }, |
| { |
| "value": "RIBOSOME/INHIBITOR", |
| "count": 733 |
| }, |
| { |
| "value": "RIBOSOME/RIBOSOME INHIBITOR", |
| "count": 580 |
| }, |
| { |
| "value": "RIBOSOME/TRANSLATION", |
| "count": 530 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN", |
| "count": 514 |
| }, |
| { |
| "value": "VIRUS/RNA", |
| "count": 504 |
| }, |
| { |
| "value": "RIBOSOMAL PROTEIN", |
| "count": 423 |
| }, |
| { |
| "value": "PROTEIN TRANSPORT", |
| "count": 381 |
| }, |
| { |
| "value": "VIRAL PROTEIN/RNA", |
| "count": 376 |
| }, |
| { |
| "value": "HYDROLASE/RNA", |
| "count": 360 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN/RNA/DNA", |
| "count": 257 |
| }, |
| { |
| "value": "CHAPERONE", |
| "count": 252 |
| }, |
| { |
| "value": "TRANSFERASE/RNA", |
| "count": 245 |
| }, |
| { |
| "value": "LIGASE/RNA", |
| "count": 232 |
| }, |
| { |
| "value": "RIBOSOME/PROTEIN TRANSPORT", |
| "count": 225 |
| }, |
| { |
| "value": "RIBOSOME/VIRAL PROTEIN", |
| "count": 221 |
| }, |
| { |
| "value": "TRANSCRIPTION/TRANSLATION", |
| "count": 214 |
| }, |
| { |
| "value": "MEMBRANE PROTEIN", |
| "count": 192 |
| }, |
| { |
| "value": "RNA, SPLICING", |
| "count": 177 |
| }, |
| { |
| "value": "TRANSLATION/RNA", |
| "count": 174 |
| }, |
| { |
| "value": "RIBOSOME/HYDROLASE", |
| "count": 134 |
| }, |
| { |
| "value": "IMMUNE SYSTEM", |
| "count": 132 |
| }, |
| { |
| "value": "METAL BINDING PROTEIN", |
| "count": 132 |
| }, |
| { |
| "value": "RIBOSOME/RIBOSOMAL PROTEIN", |
| "count": 125 |
| }, |
| { |
| "value": "RIBONUCLEIC ACID", |
| "count": 120 |
| }, |
| { |
| "value": "TRANSLOCASE", |
| "count": 117 |
| }, |
| { |
| "value": "DNA BINDING PROTEIN", |
| "count": 115 |
| }, |
| { |
| "value": "TRANSCRIPTION, TRANSLATION, RIBOSOME/TRANSFERASE/DNA/RNA", |
| "count": 111 |
| }, |
| { |
| "value": "HYDROLASE/RNA/DNA", |
| "count": 110 |
| }, |
| { |
| "value": "RECOMBINATION", |
| "count": 110 |
| }, |
| { |
| "value": "TOXIN", |
| "count": 108 |
| }, |
| { |
| "value": "RIBOSOME, TRANSCRIPTION/TRANSLATION", |
| "count": 107 |
| }, |
| { |
| "value": "RIBOSOME/TRANSCRIPTION/TRANSLATION", |
| "count": 107 |
| }, |
| { |
| "value": "TRANSCRIPTION/RNA", |
| "count": 105 |
| }, |
| { |
| "value": "RNA/HYDROLASE", |
| "count": 104 |
| }, |
| { |
| "value": "STRUCTURAL PROTEIN/RNA", |
| "count": 104 |
| }, |
| { |
| "value": "TRANSLATION/ANTIBIOTIC", |
| "count": 102 |
| }, |
| { |
| "value": "RIBOSOMAL PROTEIN/RNA", |
| "count": 101 |
| }, |
| { |
| "value": "RIBOSOME/INHIBITOR,ANTIBIOTIC", |
| "count": 99 |
| }, |
| { |
| "value": "STRUCTURAL PROTEIN", |
| "count": 99 |
| }, |
| { |
| "value": "LIGASE", |
| "count": 98 |
| }, |
| { |
| "value": "ANTITUMOR PROTEIN", |
| "count": 93 |
| }, |
| { |
| "value": "RIBOSOME/LIGASE", |
| "count": 84 |
| }, |
| { |
| "value": "RNA/IMMUNE SYSTEM", |
| "count": 75 |
| }, |
| { |
| "value": "SIGNALING PROTEIN/RNA", |
| "count": 74 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN/DNA/RNA", |
| "count": 73 |
| }, |
| { |
| "value": "ANTIVIRAL PROTEIN", |
| "count": 67 |
| }, |
| { |
| "value": "DNA BINDING PROTEIN/DNA/RNA", |
| "count": 67 |
| }, |
| { |
| "value": "HYDROLASE", |
| "count": 63 |
| }, |
| { |
| "value": "ANTIVIRAL PROTEIN/RNA", |
| "count": 62 |
| }, |
| { |
| "value": "SPLICING/RNA", |
| "count": 60 |
| }, |
| { |
| "value": "IMMUNE SYSTEM/RNA", |
| "count": 59 |
| }, |
| { |
| "value": "REPLICATION", |
| "count": 57 |
| }, |
| { |
| "value": "TRANSPORT PROTEIN", |
| "count": 57 |
| }, |
| { |
| "value": "RNA/RNA", |
| "count": 50 |
| }, |
| { |
| "value": "HYDROLASE/DNA/RNA", |
| "count": 47 |
| }, |
| { |
| "value": "RNA/RNA BINDING PROTEIN", |
| "count": 43 |
| }, |
| { |
| "value": "TRANSFERASE", |
| "count": 43 |
| }, |
| { |
| "value": "RNA RIBOZYME", |
| "count": 40 |
| }, |
| { |
| "value": "IMMUNE SYSTEM/DNA/RNA", |
| "count": 39 |
| }, |
| { |
| "value": "RIBOZYME", |
| "count": 34 |
| }, |
| { |
| "value": "HIV-1", |
| "count": 30 |
| }, |
| { |
| "value": "RNA/DNA/NUCLEIC ACID BINDING PROTEIN", |
| "count": 28 |
| }, |
| { |
| "value": "MOTOR PROTEIN", |
| "count": 25 |
| }, |
| { |
| "value": "ANTIVIRAL PROTEIN/RNA/DNA", |
| "count": 23 |
| }, |
| { |
| "value": "RNA/DNA/RNA BINDING PROTEIN", |
| "count": 22 |
| }, |
| { |
| "value": "NUCLEAR PROTEIN/RNA", |
| "count": 21 |
| }, |
| { |
| "value": "BACTERIOPHAGE HK022", |
| "count": 20 |
| }, |
| { |
| "value": "RNA/INHIBITOR", |
| "count": 20 |
| }, |
| { |
| "value": "VIRUS", |
| "count": 20 |
| }, |
| { |
| "value": "DE-NOVO PROTEIN/RNA", |
| "count": 18 |
| }, |
| { |
| "value": "nan", |
| "count": 18 |
| }, |
| { |
| "value": "HYDROLASE/HYDROLASE INHIBITOR/DNA/RNA", |
| "count": 16 |
| }, |
| { |
| "value": "RNA, TRANSFERASE", |
| "count": 15 |
| }, |
| { |
| "value": "RNA-BINDING PROTEIN/RNA", |
| "count": 15 |
| }, |
| { |
| "value": "HYDROLASE-RNA COMPLEX", |
| "count": 13 |
| }, |
| { |
| "value": "RNA/TRANSCRIPTION", |
| "count": 13 |
| }, |
| { |
| "value": "CELL CYCLE/RNA", |
| "count": 12 |
| }, |
| { |
| "value": "RECOMBINATION/RNA/DNA", |
| "count": 12 |
| }, |
| { |
| "value": "DNA BINDING PROTEIN/RNA/DNA", |
| "count": 11 |
| }, |
| { |
| "value": "HYDROLASE, RNA", |
| "count": 11 |
| }, |
| { |
| "value": "PEPTIDE/RNA", |
| "count": 11 |
| }, |
| { |
| "value": "REPLICATION/RNA/DNA", |
| "count": 11 |
| }, |
| { |
| "value": "RNA, RIBOSOMAL PROTEIN", |
| "count": 11 |
| }, |
| { |
| "value": "RNA/RNA BINDING", |
| "count": 11 |
| }, |
| { |
| "value": "SIGNALING PROTEIN", |
| "count": 11 |
| }, |
| { |
| "value": "TRANSFERASE/DNA/RNA", |
| "count": 11 |
| }, |
| { |
| "value": "DNA BINDING PROTEIN/RNA", |
| "count": 10 |
| }, |
| { |
| "value": "RNA/ANTIBIOTIC", |
| "count": 10 |
| }, |
| { |
| "value": "RNA/PEPTIDE", |
| "count": 10 |
| }, |
| { |
| "value": "TRANSPORT PROTEIN/RNA", |
| "count": 10 |
| }, |
| { |
| "value": "DNA-RNA HYBRID", |
| "count": 9 |
| }, |
| { |
| "value": "IMMUNE SYSTEM/RNA/DNA", |
| "count": 9 |
| }, |
| { |
| "value": "VIRUS/VIRAL PROTEIN/RNA", |
| "count": 9 |
| }, |
| { |
| "value": "ANTITOXIN/DNA/RNA", |
| "count": 8 |
| }, |
| { |
| "value": "DNA, RNA", |
| "count": 8 |
| }, |
| { |
| "value": "HYDROLASE/DNA", |
| "count": 8 |
| }, |
| { |
| "value": "HYDROLASE/HYDROLASE INHIBITOR/RNA", |
| "count": 8 |
| }, |
| { |
| "value": "ISOMERASE/RNA", |
| "count": 8 |
| }, |
| { |
| "value": "HYDROLASE/RNA/VIRAL PROTEIN", |
| "count": 7 |
| }, |
| { |
| "value": "NUCLEAR PROTEIN", |
| "count": 7 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN/IMMUNE SYSTEM/RNA", |
| "count": 6 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN/ISOMERASE/RNA/DNA", |
| "count": 5 |
| }, |
| { |
| "value": "STRUCTURAL PROTEIN/RNA/DNA", |
| "count": 5 |
| }, |
| { |
| "value": "UNKNOWN FUNCTION/RNA", |
| "count": 5 |
| }, |
| { |
| "value": "AMINOACYL-TRNA SYNTHETASE", |
| "count": 4 |
| }, |
| { |
| "value": "ANTIVIRAL PROTEIN/DNA/RNA", |
| "count": 4 |
| }, |
| { |
| "value": "DNA BINDING", |
| "count": 4 |
| }, |
| { |
| "value": "DNA BINDING PROTEIN, RNA BINDING PROTEIN/DNA/RNA", |
| "count": 4 |
| }, |
| { |
| "value": "OXIDOREDUCTASE/RNA", |
| "count": 4 |
| }, |
| { |
| "value": "PROTEIN TRANSPORT/RNA", |
| "count": 4 |
| }, |
| { |
| "value": "RECOMBINATION/DNA/RNA", |
| "count": 4 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN-DNA-RNA", |
| "count": 4 |
| }, |
| { |
| "value": "SYNTHETASE", |
| "count": 4 |
| }, |
| { |
| "value": "TOXIN/RNA", |
| "count": 4 |
| }, |
| { |
| "value": "HYDROLASE/RNA/ANTIMICROBIAL PROTEIN", |
| "count": 3 |
| }, |
| { |
| "value": "IMMUNE SYSTEM/HYDROLASE", |
| "count": 3 |
| }, |
| { |
| "value": "LYASE/RNA", |
| "count": 3 |
| }, |
| { |
| "value": "RNA/DNA", |
| "count": 3 |
| }, |
| { |
| "value": "TRANSCRIPTION/DNA/RNA", |
| "count": 3 |
| }, |
| { |
| "value": "TRANSFERASE/HYDROLASE/DNA/RNA", |
| "count": 3 |
| }, |
| { |
| "value": "ALU RIBONUCLEOPROTEIN PARTICLE", |
| "count": 2 |
| }, |
| { |
| "value": "HYDROLASE/PROTEIN BINDING/RNA", |
| "count": 2 |
| }, |
| { |
| "value": "MEMBRANE PROTEIN/RNA", |
| "count": 2 |
| }, |
| { |
| "value": "RNA BINDING PROTEIN/ISOMERASE/DNA", |
| "count": 2 |
| }, |
| { |
| "value": "RNA/HYDROLASE/RNA BINDING PROTEIN", |
| "count": 2 |
| }, |
| { |
| "value": "RNA/RNA BINDING PROTEIN/HYDROLASE", |
| "count": 2 |
| }, |
| { |
| "value": "RRNA BINDING PROTEIN/RNA", |
| "count": 2 |
| }, |
| { |
| "value": "ANTIMICROBIAL PROTEIN", |
| "count": 1 |
| }, |
| { |
| "value": "DNA/RNA/HYDROLASE", |
| "count": 1 |
| }, |
| { |
| "value": "HYDROLASE/IMMUNE SYSTEM/RNA", |
| "count": 1 |
| }, |
| { |
| "value": "HYDROLASE/TRANSFERASE/RNA", |
| "count": 1 |
| }, |
| { |
| "value": "NUCLEIC ACID", |
| "count": 1 |
| }, |
| { |
| "value": "RNA/VIRUS/VIRAL PROTEIN", |
| "count": 1 |
| }, |
| { |
| "value": "TRANSFERASE/HYDROLASE/RNA", |
| "count": 1 |
| }, |
| { |
| "value": "TRANSFERASE/RNA BINDING PROTEIN/DNA/RNA", |
| "count": 1 |
| }, |
| { |
| "value": "UNKNOWN FUNCTION/DNA/RNA", |
| "count": 1 |
| }, |
| { |
| "value": "VIRAL PROTEIN, TRANSFERASE/RNA", |
| "count": 1 |
| } |
| ], |
| "biomedical_tags": [ |
| { |
| "value": "rrna_ribosome", |
| "count": 265609 |
| }, |
| { |
| "value": "bacterial", |
| "count": 95535 |
| }, |
| { |
| "value": "trna", |
| "count": 86433 |
| }, |
| { |
| "value": "antibiotic", |
| "count": 62899 |
| }, |
| { |
| "value": "human", |
| "count": 31646 |
| }, |
| { |
| "value": "inhibitor", |
| "count": 23973 |
| }, |
| { |
| "value": "viral", |
| "count": 14637 |
| }, |
| { |
| "value": "drug_complex", |
| "count": 13036 |
| }, |
| { |
| "value": "frameshift", |
| "count": 12213 |
| }, |
| { |
| "value": "infectious_disease", |
| "count": 10489 |
| }, |
| { |
| "value": "ires", |
| "count": 8199 |
| }, |
| { |
| "value": "ribozyme", |
| "count": 3422 |
| }, |
| { |
| "value": "spliceosome", |
| "count": 2854 |
| }, |
| { |
| "value": "cancer_related", |
| "count": 2435 |
| }, |
| { |
| "value": "sars_cov", |
| "count": 2202 |
| }, |
| { |
| "value": "hiv", |
| "count": 1742 |
| }, |
| { |
| "value": "riboswitch", |
| "count": 1348 |
| }, |
| { |
| "value": "crispr", |
| "count": 1233 |
| }, |
| { |
| "value": "aptamer", |
| "count": 678 |
| }, |
| { |
| "value": "utr", |
| "count": 456 |
| }, |
| { |
| "value": "telomerase", |
| "count": 406 |
| }, |
| { |
| "value": "antitumor", |
| "count": 343 |
| }, |
| { |
| "value": "antiviral", |
| "count": 237 |
| }, |
| { |
| "value": "neurodegenerative", |
| "count": 228 |
| }, |
| { |
| "value": "microrna", |
| "count": 185 |
| }, |
| { |
| "value": "thermometer", |
| "count": 35 |
| }, |
| { |
| "value": "nan", |
| "count": 18 |
| } |
| ], |
| "therapeutic_areas": [ |
| { |
| "value": "protein_synthesis", |
| "count": 267012 |
| }, |
| { |
| "value": "infectious_disease", |
| "count": 128424 |
| }, |
| { |
| "value": "gene_regulation", |
| "count": 25241 |
| }, |
| { |
| "value": "virology", |
| "count": 14658 |
| }, |
| { |
| "value": "oncology", |
| "count": 2435 |
| }, |
| { |
| "value": "genome_editing", |
| "count": 1233 |
| }, |
| { |
| "value": "neurology", |
| "count": 228 |
| }, |
| { |
| "value": "nan", |
| "count": 18 |
| } |
| ], |
| "lw_classes": [ |
| { |
| "value": "cWW", |
| "count": 281281 |
| }, |
| { |
| "value": "tSH", |
| "count": 67473 |
| }, |
| { |
| "value": "tWH", |
| "count": 22949 |
| }, |
| { |
| "value": "tHS", |
| "count": 20606 |
| }, |
| { |
| "value": "cSH", |
| "count": 18331 |
| }, |
| { |
| "value": "cSW", |
| "count": 14181 |
| }, |
| { |
| "value": "tHW", |
| "count": 10798 |
| }, |
| { |
| "value": "cWH", |
| "count": 7194 |
| }, |
| { |
| "value": "tSW", |
| "count": 6316 |
| }, |
| { |
| "value": "tWW", |
| "count": 5617 |
| }, |
| { |
| "value": "cWS", |
| "count": 5467 |
| }, |
| { |
| "value": "tHH", |
| "count": 3474 |
| }, |
| { |
| "value": "tWS", |
| "count": 2845 |
| }, |
| { |
| "value": "cHW", |
| "count": 2831 |
| }, |
| { |
| "value": "cHH", |
| "count": 1137 |
| }, |
| { |
| "value": "tSS", |
| "count": 1129 |
| }, |
| { |
| "value": "cSS", |
| "count": 917 |
| }, |
| { |
| "value": "cHS", |
| "count": 742 |
| }, |
| { |
| "value": "t.W", |
| "count": 402 |
| }, |
| { |
| "value": "t.H", |
| "count": 308 |
| }, |
| { |
| "value": "cW.", |
| "count": 296 |
| }, |
| { |
| "value": "tW.", |
| "count": 224 |
| }, |
| { |
| "value": "c.W", |
| "count": 214 |
| }, |
| { |
| "value": "tH.", |
| "count": 191 |
| }, |
| { |
| "value": "cH.", |
| "count": 92 |
| }, |
| { |
| "value": "c.H", |
| "count": 79 |
| }, |
| { |
| "value": "t.S", |
| "count": 70 |
| }, |
| { |
| "value": "--", |
| "count": 66 |
| }, |
| { |
| "value": "tS.", |
| "count": 66 |
| }, |
| { |
| "value": "cS.", |
| "count": 3 |
| } |
| ], |
| "saenger_classes": [ |
| { |
| "value": "XIX", |
| "count": 261190 |
| }, |
| { |
| "value": "XX", |
| "count": 145776 |
| }, |
| { |
| "value": "XXVIII", |
| "count": 71794 |
| }, |
| { |
| "value": "XI", |
| "count": 60674 |
| }, |
| { |
| "value": "XXV", |
| "count": 7187 |
| }, |
| { |
| "value": "XVI", |
| "count": 6820 |
| }, |
| { |
| "value": "XXIV", |
| "count": 6434 |
| }, |
| { |
| "value": "VIII", |
| "count": 2366 |
| }, |
| { |
| "value": "X", |
| "count": 2193 |
| }, |
| { |
| "value": "XXVI", |
| "count": 1781 |
| }, |
| { |
| "value": "V", |
| "count": 1696 |
| }, |
| { |
| "value": "XVIII", |
| "count": 1458 |
| }, |
| { |
| "value": "II", |
| "count": 1226 |
| }, |
| { |
| "value": "IX", |
| "count": 924 |
| }, |
| { |
| "value": "VI", |
| "count": 883 |
| }, |
| { |
| "value": "XXIII", |
| "count": 724 |
| }, |
| { |
| "value": "I", |
| "count": 621 |
| }, |
| { |
| "value": "XXI", |
| "count": 600 |
| }, |
| { |
| "value": "XXII", |
| "count": 350 |
| }, |
| { |
| "value": "IV", |
| "count": 140 |
| }, |
| { |
| "value": "VII", |
| "count": 119 |
| }, |
| { |
| "value": "XXIX", |
| "count": 105 |
| }, |
| { |
| "value": "XVII", |
| "count": 77 |
| }, |
| { |
| "value": "III", |
| "count": 41 |
| }, |
| { |
| "value": "XIII", |
| "count": 25 |
| }, |
| { |
| "value": "XXVII", |
| "count": 21 |
| }, |
| { |
| "value": "XII", |
| "count": 17 |
| } |
| ], |
| "is_noncanonical": [ |
| { |
| "value": "True", |
| "count": 167867 |
| }, |
| { |
| "value": "False", |
| "count": 115297 |
| } |
| ], |
| "has_wobble": [ |
| { |
| "value": "False", |
| "count": 197881 |
| }, |
| { |
| "value": "True", |
| "count": 85283 |
| } |
| ], |
| "has_syn": [ |
| { |
| "value": "False", |
| "count": 250305 |
| }, |
| { |
| "value": "True", |
| "count": 32859 |
| } |
| ], |
| "has_turn": [ |
| { |
| "value": "True", |
| "count": 216536 |
| }, |
| { |
| "value": "False", |
| "count": 66628 |
| } |
| ], |
| "has_c2p_endo": [ |
| { |
| "value": "False", |
| "count": 169142 |
| }, |
| { |
| "value": "True", |
| "count": 114022 |
| } |
| ], |
| "is_biomedical": [ |
| { |
| "value": "True", |
| "count": 275991 |
| }, |
| { |
| "value": "False", |
| "count": 7155 |
| } |
| ], |
| "rfam_id": [ |
| { |
| "value": "LSU_rRNA_bacteria", |
| "count": 92768 |
| }, |
| { |
| "value": "SSU_rRNA_bacteria", |
| "count": 49818 |
| }, |
| { |
| "value": "LSU_rRNA_eukarya", |
| "count": 37580 |
| }, |
| { |
| "value": "SSU_rRNA_eukarya", |
| "count": 18088 |
| }, |
| { |
| "value": "LSU_rRNA_archaea", |
| "count": 6823 |
| }, |
| { |
| "value": "5S_rRNA", |
| "count": 5841 |
| }, |
| { |
| "value": "tRNA", |
| "count": 1763 |
| }, |
| { |
| "value": "SSU_rRNA_archaea", |
| "count": 1547 |
| }, |
| { |
| "value": "5_8S_rRNA", |
| "count": 1137 |
| }, |
| { |
| "value": "Intron_gpI", |
| "count": 512 |
| }, |
| { |
| "value": "group-II-D1D4-3", |
| "count": 491 |
| }, |
| { |
| "value": "Intron_gpII", |
| "count": 473 |
| }, |
| { |
| "value": "Gammaretro_CES", |
| "count": 449 |
| }, |
| { |
| "value": "GOLLD", |
| "count": 342 |
| }, |
| { |
| "value": "ROOL", |
| "count": 335 |
| }, |
| { |
| "value": "SSU_rRNA_microsporidia", |
| "count": 326 |
| }, |
| { |
| "value": "U2", |
| "count": 255 |
| }, |
| { |
| "value": "group-II-D1D4-1", |
| "count": 215 |
| }, |
| { |
| "value": "U5", |
| "count": 182 |
| }, |
| { |
| "value": "IRES_HCV", |
| "count": 160 |
| }, |
| { |
| "value": "PrrB_RsmZ", |
| "count": 135 |
| }, |
| { |
| "value": "HIV-1_DIS", |
| "count": 133 |
| }, |
| { |
| "value": "glmS", |
| "count": 132 |
| }, |
| { |
| "value": "U4", |
| "count": 129 |
| }, |
| { |
| "value": "group-II-D1D4-7", |
| "count": 120 |
| }, |
| { |
| "value": "HIV-1_SD", |
| "count": 118 |
| }, |
| { |
| "value": "K10_TLS", |
| "count": 117 |
| }, |
| { |
| "value": "U6", |
| "count": 113 |
| }, |
| { |
| "value": "U1_yeast", |
| "count": 102 |
| }, |
| { |
| "value": "SAM", |
| "count": 101 |
| }, |
| { |
| "value": "HIV-1_SL3", |
| "count": 82 |
| }, |
| { |
| "value": "Lysine", |
| "count": 80 |
| }, |
| { |
| "value": "RNaseP_bact_a", |
| "count": 73 |
| }, |
| { |
| "value": "mir-2985", |
| "count": 73 |
| }, |
| { |
| "value": "7SK", |
| "count": 71 |
| }, |
| { |
| "value": "c-di-GMP-I-GGC", |
| "count": 64 |
| }, |
| { |
| "value": "IRES_Picorna_2", |
| "count": 62 |
| }, |
| { |
| "value": "Telomerase-vert", |
| "count": 62 |
| }, |
| { |
| "value": "Metazoa_SRP", |
| "count": 61 |
| }, |
| { |
| "value": "SSU_trypano_mito", |
| "count": 60 |
| }, |
| { |
| "value": "HIV_FE", |
| "count": 59 |
| }, |
| { |
| "value": "mir-31", |
| "count": 57 |
| }, |
| { |
| "value": "CRISPR-DR34", |
| "count": 52 |
| }, |
| { |
| "value": "Cobalamin", |
| "count": 50 |
| }, |
| { |
| "value": "LSU_trypano_mito", |
| "count": 50 |
| }, |
| { |
| "value": "Bacteria_small_SRP", |
| "count": 49 |
| }, |
| { |
| "value": "TPP", |
| "count": 49 |
| }, |
| { |
| "value": "RNaseP_nuc", |
| "count": 48 |
| }, |
| { |
| "value": "TLS-PK3", |
| "count": 46 |
| }, |
| { |
| "value": "Phage_pRNA", |
| "count": 45 |
| }, |
| { |
| "value": "tmRNA", |
| "count": 45 |
| }, |
| { |
| "value": "IRES_Cripavirus", |
| "count": 44 |
| }, |
| { |
| "value": "Purine", |
| "count": 42 |
| }, |
| { |
| "value": "Fungi_U3", |
| "count": 40 |
| }, |
| { |
| "value": "Glycine", |
| "count": 39 |
| }, |
| { |
| "value": "ARRPOF", |
| "count": 38 |
| }, |
| { |
| "value": "tracrRNA", |
| "count": 37 |
| }, |
| { |
| "value": "c-di-GMP-I", |
| "count": 35 |
| }, |
| { |
| "value": "ZMP-ZTP", |
| "count": 34 |
| }, |
| { |
| "value": "c-di-AMP", |
| "count": 34 |
| }, |
| { |
| "value": "2dG-I", |
| "count": 32 |
| }, |
| { |
| "value": "Entero_5_CRE", |
| "count": 32 |
| }, |
| { |
| "value": "THF-II", |
| "count": 31 |
| }, |
| { |
| "value": "THF", |
| "count": 30 |
| }, |
| { |
| "value": "Telomerase-cil", |
| "count": 27 |
| }, |
| { |
| "value": "DENV_SLA", |
| "count": 25 |
| }, |
| { |
| "value": "mir-TAR", |
| "count": 25 |
| }, |
| { |
| "value": "Xanthine", |
| "count": 24 |
| }, |
| { |
| "value": "Bacteria_large_SRP", |
| "count": 23 |
| }, |
| { |
| "value": "HCV_ARF_SL", |
| "count": 23 |
| }, |
| { |
| "value": "RNaseP_arch", |
| "count": 22 |
| }, |
| { |
| "value": "Magnesium", |
| "count": 21 |
| }, |
| { |
| "value": "GP_knot1", |
| "count": 20 |
| }, |
| { |
| "value": "Hairpin-meta1", |
| "count": 20 |
| }, |
| { |
| "value": "Phage_DGR", |
| "count": 19 |
| }, |
| { |
| "value": "preQ1-II", |
| "count": 19 |
| }, |
| { |
| "value": "OLE", |
| "count": 18 |
| }, |
| { |
| "value": "RNaseP_bact_b", |
| "count": 17 |
| }, |
| { |
| "value": "tRNA-Sec", |
| "count": 17 |
| }, |
| { |
| "value": "Histone3", |
| "count": 16 |
| }, |
| { |
| "value": "nadA", |
| "count": 15 |
| }, |
| { |
| "value": "MS2", |
| "count": 14 |
| }, |
| { |
| "value": "U11", |
| "count": 14 |
| }, |
| { |
| "value": "azaaromatic", |
| "count": 14 |
| }, |
| { |
| "value": "RNase_MRP", |
| "count": 13 |
| }, |
| { |
| "value": "Glutamine", |
| "count": 12 |
| }, |
| { |
| "value": "SAM-I-IV", |
| "count": 12 |
| }, |
| { |
| "value": "Guanidine-I", |
| "count": 11 |
| }, |
| { |
| "value": "IRES_Pesti", |
| "count": 11 |
| }, |
| { |
| "value": "Pistol", |
| "count": 11 |
| }, |
| { |
| "value": "Fluoride", |
| "count": 10 |
| }, |
| { |
| "value": "PreQ1-III", |
| "count": 10 |
| }, |
| { |
| "value": "RT-12", |
| "count": 10 |
| }, |
| { |
| "value": "SAM-IV", |
| "count": 10 |
| }, |
| { |
| "value": "SAM-SAH", |
| "count": 10 |
| }, |
| { |
| "value": "Tymo_tRNA-like", |
| "count": 10 |
| }, |
| { |
| "value": "mir-663", |
| "count": 10 |
| }, |
| { |
| "value": "TYMV_upPK", |
| "count": 9 |
| }, |
| { |
| "value": "U3", |
| "count": 9 |
| }, |
| { |
| "value": "Corona_FSE", |
| "count": 8 |
| }, |
| { |
| "value": "mascRNA-menRNA", |
| "count": 8 |
| }, |
| { |
| "value": "GIR1", |
| "count": 7 |
| }, |
| { |
| "value": "HEARO", |
| "count": 7 |
| }, |
| { |
| "value": "Manganese", |
| "count": 7 |
| }, |
| { |
| "value": "raiA", |
| "count": 7 |
| }, |
| { |
| "value": "AdoCbl-II", |
| "count": 6 |
| }, |
| { |
| "value": "Flavivirus_DB", |
| "count": 6 |
| }, |
| { |
| "value": "Hammerhead_1", |
| "count": 6 |
| }, |
| { |
| "value": "Hammerhead_3", |
| "count": 6 |
| }, |
| { |
| "value": "let-7", |
| "count": 6 |
| }, |
| { |
| "value": "CPEB3_ribozyme", |
| "count": 5 |
| }, |
| { |
| "value": "DnaX", |
| "count": 5 |
| }, |
| { |
| "value": "Hatchet", |
| "count": 5 |
| }, |
| { |
| "value": "Twister-sister", |
| "count": 5 |
| }, |
| { |
| "value": "U1", |
| "count": 5 |
| }, |
| { |
| "value": "Archaea_SRP", |
| "count": 4 |
| }, |
| { |
| "value": "IRES_HepA", |
| "count": 4 |
| }, |
| { |
| "value": "RAGATH-18", |
| "count": 4 |
| }, |
| { |
| "value": "abiF", |
| "count": 4 |
| }, |
| { |
| "value": "c-di-GMP-II", |
| "count": 4 |
| }, |
| { |
| "value": "Flavivirus_SLIV", |
| "count": 3 |
| }, |
| { |
| "value": "SAH", |
| "count": 3 |
| }, |
| { |
| "value": "U12", |
| "count": 3 |
| }, |
| { |
| "value": "U6atac", |
| "count": 3 |
| }, |
| { |
| "value": "mir-16", |
| "count": 3 |
| }, |
| { |
| "value": "6S", |
| "count": 2 |
| }, |
| { |
| "value": "FMN", |
| "count": 2 |
| }, |
| { |
| "value": "Flavi_CRE", |
| "count": 2 |
| }, |
| { |
| "value": "Virus-PTE", |
| "count": 2 |
| }, |
| { |
| "value": "s2m", |
| "count": 2 |
| }, |
| { |
| "value": "Guanidine-III", |
| "count": 1 |
| }, |
| { |
| "value": "IRE_II", |
| "count": 1 |
| }, |
| { |
| "value": "MIR166", |
| "count": 1 |
| }, |
| { |
| "value": "SAM_V", |
| "count": 1 |
| }, |
| { |
| "value": "SECIS_1", |
| "count": 1 |
| }, |
| { |
| "value": "VA", |
| "count": 1 |
| }, |
| { |
| "value": "YrlA", |
| "count": 1 |
| } |
| ], |
| "rna_so_type": [ |
| { |
| "value": "rRNA", |
| "count": 216922 |
| }, |
| { |
| "value": "misc_RNA", |
| "count": 11790 |
| }, |
| { |
| "value": "ncRNA", |
| "count": 4258 |
| }, |
| { |
| "value": "tRNA", |
| "count": 1768 |
| }, |
| { |
| "value": "snRNA", |
| "count": 830 |
| }, |
| { |
| "value": "sRNA", |
| "count": 701 |
| }, |
| { |
| "value": "ribozyme", |
| "count": 582 |
| }, |
| { |
| "value": "RNase_P_RNA", |
| "count": 167 |
| }, |
| { |
| "value": "pre_miRNA", |
| "count": 164 |
| }, |
| { |
| "value": "SRP_RNA", |
| "count": 133 |
| }, |
| { |
| "value": "telomerase_RNA", |
| "count": 89 |
| }, |
| { |
| "value": "other", |
| "count": 65 |
| }, |
| { |
| "value": "snoRNA", |
| "count": 50 |
| }, |
| { |
| "value": "tmRNA", |
| "count": 45 |
| }, |
| { |
| "value": "hammerhead_ribozyme", |
| "count": 19 |
| }, |
| { |
| "value": "RNase_MRP_RNA", |
| "count": 13 |
| }, |
| { |
| "value": "Y_RNA", |
| "count": 1 |
| } |
| ], |
| "chain_xref_status": [ |
| { |
| "value": "ok", |
| "count": 237597 |
| }, |
| { |
| "value": "entry_not_resolved", |
| "count": 45280 |
| }, |
| { |
| "value": "no_chain_match", |
| "count": 287 |
| } |
| ] |
| }, |
| "ranges": { |
| "resolution": { |
| "min": 1.3, |
| "max": 34.0, |
| "n": 275253 |
| }, |
| "year": { |
| "min": 1994.0, |
| "max": 2026.0, |
| "n": 283146 |
| }, |
| "loop_total": { |
| "min": 1.0, |
| "max": 14.0, |
| "n": 283164 |
| }, |
| "n_basepairs": { |
| "min": 2.0, |
| "max": 14.0, |
| "n": 283164 |
| }, |
| "n_noncanonical_bp": { |
| "min": 0.0, |
| "max": 11.0, |
| "n": 283164 |
| }, |
| "n_residues": { |
| "min": 7.0, |
| "max": 22.0, |
| "n": 283164 |
| }, |
| "druggable_score": { |
| "min": 0.0, |
| "max": 2.0, |
| "n": 283146 |
| } |
| }, |
| "gated_out": { |
| "druggable_flag": "cardinality=1 < 2" |
| }, |
| "total": 283164 |
| } |
