| import pytest |
|
|
| from haddock.libs.libgrid import ( |
| GridJob, |
| CompositeGridJob, |
| JobStatus, |
| Tag, |
| ping_dirac, |
| validate_dirac, |
| ) |
|
|
|
|
| @pytest.fixture |
| def dummy_paths(tmp_path): |
| toppar = tmp_path / "toppar" |
| toppar.mkdir() |
| module = tmp_path / "module" |
| module.mkdir() |
| return toppar, module |
|
|
|
|
| def test_gridjob_create_jdl_and_job_script(dummy_paths): |
| toppar, module = dummy_paths |
| job = GridJob(input="input", toppar_path=toppar, module_path=module) |
| job.name = "testjob" |
| job.expected_outputs = ["foo.out"] |
| job.jdl = job.loc / "job.jdl" |
| job.job_script = job.loc / "job.sh" |
| job.create_jdl() |
| job.create_job_script() |
| assert job.jdl.exists() |
| assert job.job_script.exists() |
| content = job.jdl.read_text() |
| assert f'JobName = "{job.name}";' in content |
| assert '"foo.out"' in content |
|
|
|
|
| def test_gridjob_process_input_f(tmp_path, dummy_paths): |
| toppar, module = dummy_paths |
| input_str = '$output_test = "result.txt";\n' |
| job = GridJob(input=input_str, toppar_path=toppar, module_path=module) |
| job.name = "testjob" |
| job.loc = tmp_path |
| job.input_str = input_str |
| job.process_input_f() |
| assert "result.txt" in job.expected_outputs |
| inp_file = tmp_path / f"{job.name}.inp" |
| assert inp_file.exists() |
|
|
|
|
| def test_compositegridjob_parse_input_and_process(dummy_paths): |
| toppar, module = dummy_paths |
| input_list = ["line1\nstop\n", "line2\nstop\n"] |
| job = CompositeGridJob(input=input_list, toppar_path=toppar, module_path=module) |
| assert len(job.input_str_list) == 2 |
| job.process_input_f() |
| for idx in range(2): |
| inp_file = job.loc / f"{idx}_{job.name}.inp" |
| assert inp_file.exists() |
|
|
|
|
| def test_gridjob_repr(dummy_paths): |
| toppar, module = dummy_paths |
| job = GridJob(input="input", toppar_path=toppar, module_path=module) |
| s = repr(job) |
| assert "ID:" in s and "Name:" in s and "Status:" in s |
|
|
|
|
| def test_jobstatus_from_string(): |
| assert JobStatus.from_string("Running") == JobStatus.RUNNING |
| assert JobStatus.from_string("unknown") == JobStatus.UNKNOWN |
|
|
|
|
| def test_tag_enum(): |
| assert Tag.PROBING.value == "Probing" |
| assert Tag.DEFAULT.value == "Default" |
|
|
|
|
| def test_parse_output(): |
| s = "JobID=123 Status=Running Site=TestSite;" |
| d = GridJob.parse_output(s) |
| assert d["JobID"] == "123" |
| assert d["Status"] == "Running" |
| assert d["Site"] == "TestSite" |
|
|
|
|
| def test_process_line_and_find_output(): |
| line = '$output_test = "foo.txt";' |
| new_line, found = GridJob._process_line(line) |
| assert new_line == line |
| output = GridJob._find_output(line) |
| assert output == "foo.txt" |
|
|
|
|
| def test_clean_timings(dummy_paths): |
| toppar, module = dummy_paths |
| job = GridJob(input="input", toppar_path=toppar, module_path=module) |
| job.timings = {"foo": 123} |
| job.clean_timings() |
| assert job.timings == {} |
|
|
|
|
| def test_clean_removes_tmpdir(dummy_paths): |
| toppar, module = dummy_paths |
| job = GridJob(input="input", toppar_path=toppar, module_path=module) |
| loc = job.loc |
| assert loc.exists() |
| job.clean() |
| assert not loc.exists() |
|
|
|
|
| def test_ping_and_validate_dirac(monkeypatch): |
| monkeypatch.setattr("shutil.which", lambda cmd: "/usr/bin/" + cmd) |
| monkeypatch.setattr( |
| "subprocess.run", |
| lambda *a, **k: type( |
| "R", (), {"returncode": 0, "stderr": b"", "stdout": b""} |
| )(), |
| ) |
| assert validate_dirac() |
| assert ping_dirac() |
|
|
|
|
| def test_process_line(tmp_path, monkeypatch): |
| |
| line = "no pattern here" |
| new_line, found = GridJob._process_line(line) |
| assert new_line == line |
| assert found is None |
|
|
| |
| test_file = tmp_path / "foo.txt" |
| test_file.write_text("data") |
| line = f"@@{test_file}" |
| monkeypatch.chdir(tmp_path) |
| new_line, found = GridJob._process_line(line) |
| assert new_line == line.replace(str(test_file), "foo.txt") |
| assert found == str(test_file) |
|
|
| |
| line = '($ test="bar.txt")' |
| new_line, found = GridJob._process_line(line) |
| assert new_line == line |
| assert found is None |
|
|
|
|
| def test_find_output(): |
| line = '$output_test = "foo.txt";' |
| output = GridJob._find_output(line) |
| assert output == "foo.txt" |
|
|
| line2 = "$output_test = bar.txt;" |
| output2 = GridJob._find_output(line2) |
| assert output2 == "bar.txt" |
|
|
| line3 = "no output here" |
| output3 = GridJob._find_output(line3) |
| assert output3 is None |
|
|
