Commit History
DESCRIPTION: document neoag_tested_{mmu,hsa} + flag 6186 mouse CEDAR rows mislabelled as human caae2e8 verified
Add neoag_tested_hsa: 717 HLA-restricted rows from the same IEDB mouse export (HLA-Tg mice + human hosts) 95d8d4b verified
Add neoag_tested_mmu: 1977 murine tested neo-epitopes from IEDB (mhc_species=MusMusculus) 8cff104 verified
Publish TCGA neoantigens; add data-catalog infographic 16b4d49
thymus: add human thymic self-peptidome (source #1 refill) dd356be
data(proteome): add 16 bacterial + viral reference proteomes f41cb71
neoag: primary datasets take precedence over CEDAR/Neopep; trim blank cols from iedb_labeled 00ea153
DESCRIPTION: label iedb_labeled as the ipred training set (#7) c96db3d
Rework #9 into workhorse neoag DB (tested + candidates) + HLA population freqs 89a5bee
Add v1 data compendium: immunogenicity labels/benchmarks + similarity references 1ebb8a6
Add pMHC dataset: epitope-MHC binding from IEDB 9a81417
Mikhail Shugay commited on