Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n10/lora/receipts/score.json

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+  "outputs": [
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+    "support_sha256": "71350ef0e193641d9f260d1758377a3de64dc12ad169c130a0293e33711a48ac"
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+  "reuse": {}
+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n10/lora/score/per_donor.csv

@@ -0,0 +1,22 @@
+arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
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paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n10/lora/score/summary.json

@@ -0,0 +1,211 @@
+{
+ "schema": "paired_ft_scores.v1",
+ "dataset": "immicro",
+ "written_utc": "2026-10-15T11:43:18.258499+00:00",
+ "command": [
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
+  "--dataset",
+  "immicro",
+  "--out",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n10/lora/score",
+  "--donors",
+  "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n10/lora/test_sample_ids.txt",
+  "--threads",
+  "2",
+  "--arm",
+  "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold4/n10/lora.npz",
+  "--no-contrast",
+  "--no-deg"
+ ],
+ "arms": [
+  "lora"
+ ],
+ "donors": [
+  "HS8",
+  "HS11",
+  "HS20",
+  "HS27",
+  "HS28",
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+  "HS87",
+  "HS88",
+  "HS93",
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+  "HS97",
+  "HS103",
+  "HS104"
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+ "n_donors": 21,
+ "reference": {
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+  "reference_sha256": "c5e2547be3ec3b12cb0c0b404a49e14a046ae59d40be70427f98f083a76bce17",
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+ "contrast_definition": {
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+  "reason": "--no-contrast"
+ },
+ "deg_definition": {
+  "enabled": false,
+  "reason": "--no-deg"
+ },
+ "headline": {
+  "lora": {
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+   "median_umi_gen": 2806.0,
+   "median_umi_obs": 1973.0,
+   "seconds": 11.2
+  }
+ },
+ "per_arm": {
+  "lora": {
+   "arm": "lora",
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paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold4/n20/lora/scoring_support.json

@@ -0,0 +1,67 @@
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