Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/ji2025_chili/disease/draw1/lora/receipts/score.json

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+}

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/ji2025_chili/disease/draw1/lora/score/contrast.csv

@@ -0,0 +1,14 @@
+arm,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,n_case_donors_obs,n_control_donors_obs,n_case_donors_gen,n_control_donors_gen,n_cells_obs,n_cells_gen,deg_scored,top50_overlap,top50_jaccard,obs_top_list_size,gen_top_list_size,n_sig_obs,n_sig_gen,top50_overlap_broadcast,top50_jaccard_broadcast,broadcast_top_list_size,n_sig_broadcast
+lora,T cell,mean_cp10k,3013,0.2218250278686112,0.1772381595386375,0.1909888034735621,0.2161013035068907,15,11,15,11,49230,17765,,,,,,,,,,,
+lora,T cell,pseudobulk_log1p_cpm,3013,0.2391960641158479,0.2548071458258705,0.2014513589858581,0.1878344919582529,15,11,15,11,49230,17765,,,,,,,,,,,
+lora,B cell,mean_cp10k,3263,0.0561187537045535,0.0985376804319627,0.0488365814548893,0.0778096749684497,15,11,15,11,6059,2190,,,,,,,,,,,
+lora,B cell,pseudobulk_log1p_cpm,3263,0.0199182941493475,0.0351830339749845,0.0189820744892464,0.0271426554940043,15,11,15,11,6059,2190,,,,,,,,,,,
+lora,Monocyte,mean_cp10k,3157,0.5608159254317674,0.3948466424201932,0.5000674077355118,0.3166239407886482,15,11,15,11,30700,11770,,,,,,,,,,,
+lora,Monocyte,pseudobulk_log1p_cpm,3157,0.429499490931079,0.3639773066663638,0.3830761717901378,0.2248340051382737,15,11,15,11,30700,11770,,,,,,,,,,,
+lora,NK cell,mean_cp10k,3047,0.1691940187117895,0.1610569078245163,0.1429685749438127,0.1904589768075242,15,11,15,11,16047,5345,,,,,,,,,,,
+lora,NK cell,pseudobulk_log1p_cpm,3047,0.0706052581172148,0.1345214411691737,0.0568918770396625,0.1082485842138554,15,11,15,11,16047,5345,,,,,,,,,,,
+lora,T cell,welch_top50_deg,5752,,,,,15,11,15,11,49230,17765,True,0.0,0.0,50.0,0.0,1824.0,0.0,0.0,0.0,0.0,0.0
+lora,B cell,welch_top50_deg,5752,,,,,15,11,15,11,6059,2190,True,0.0,0.0,43.0,0.0,43.0,0.0,0.0,0.0,0.0,0.0
+lora,Monocyte,welch_top50_deg,5752,,,,,15,11,15,11,30700,11770,True,0.0,0.0,50.0,1.0,113.0,1.0,0.0,0.0,0.0,0.0
+lora,NK cell,welch_top50_deg,5752,,,,,15,11,15,11,16047,5345,True,0.0,0.0,50.0,0.0,406.0,0.0,0.0,0.0,0.0,0.0
+lora,DC,welch_top50_deg,5752,,,,,13,11,15,11,1448,854,True,0.0,0.0,50.0,0.0,106.0,0.0,0.0,0.0,0.0,0.0

paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/ji2025_chili/disease/draw4/lora/score/summary.json

@@ -0,0 +1,536 @@
+{
+  "schema": "paired_ft_scores.v1",
+  "dataset": "ji2025_chili",
+  "written_utc": "2026-10-15T11:41:18.624953+00:00",
+  "command": [
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
+    "--dataset",
+    "ji2025_chili",
+    "--out",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/disease_width_comparison_20261015/ji2025_chili/draw4/score",
+    "--arm",
+    "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/ji2025_chili/disease/draw4/lora.npz",
+    "--condition",
+    "lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/ji2025_chili/disease/draw4/test_raw.npz",
+    "--donors",
+    "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/disease_width_comparison_20261015/ji2025_chili/draw4/test_samples.txt",
+    "--threads",
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+    "N018_BC",
+    "N018_AC",
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paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/ji2025_chili/disease/draw4/lora/scoring_support.json

@@ -0,0 +1,73 @@
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