Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw1/cat.csv

@@ -0,0 +1,301 @@
+dataset,design,unit,arm,predictor,celltype,k,k_eff,cat_same_sign,cat_any_sign,chance_same_sign,chance_any_sign,G_both,pred_defined,n_tested_obs,n_tested_pred
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+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,generated:zs_pseudo,NK cell,50,50,0.28,0.28,0.006028454304316373,0.012056908608632746,4147,True,5579,4152
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+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,NK cell,200,200,0.295,0.295,0.018241517694272163,0.036483035388544326,5482,True,5579,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,NK cell,500,500,0.354,0.36,0.04560379423568041,0.09120758847136082,5482,True,5579,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,generated:scsemi5,DC,10,10,0.1,0.1,0.002691065662002153,0.005382131324004306,1858,True,5423,1863
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,generated:scsemi5,DC,20,20,0.05,0.05,0.005382131324004306,0.010764262648008612,1858,True,5423,1863
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,generated:scsemi5,DC,50,50,0.02,0.02,0.013455328310010764,0.02691065662002153,1858,True,5423,1863
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,generated:scsemi5,DC,100,100,0.01,0.01,0.02691065662002153,0.05382131324004306,1858,True,5423,1863
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,generated:scsemi5,DC,200,200,0.025,0.03,0.05382131324004306,0.10764262648008611,1858,True,5423,1863
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,generated:scsemi5,DC,500,500,0.1,0.13,0.13455328310010764,0.2691065662002153,1858,True,5423,1863
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,DC,10,10,0.1,0.1,0.0009380863039399625,0.001876172607879925,5330,True,5423,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,DC,20,20,0.15,0.15,0.001876172607879925,0.00375234521575985,5330,True,5423,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,DC,50,50,0.16,0.16,0.004690431519699813,0.009380863039399626,5330,True,5423,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,DC,100,100,0.2,0.2,0.009380863039399626,0.01876172607879925,5330,True,5423,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,DC,200,200,0.23,0.23,0.01876172607879925,0.0375234521575985,5330,True,5423,5823
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,broadcast:test_raw.npz@c2293bb9,DC,500,500,0.29,0.292,0.04690431519699812,0.09380863039399624,5330,True,5423,5823

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw1/ceiling.csv

@@ -0,0 +1,51 @@
+dataset,design,unit,predictor,arm,celltype,n_genes,pearson_mean,pearson_sd,spearman_mean,spearman_sd,pearson_s20260926,spearman_s20260926,pearson_s20260927,spearman_s20260927,pearson_s20260928,spearman_s20260928,pearson_s20260929,spearman_s20260929,pearson_s20260930,spearman_s20260930,sb_reliability_pearson,noise_free_ceiling_pearson,sb_reliability_spearman,noise_free_ceiling_spearman,min_n_case_donors_A,min_n_control_donors_A,min_n_case_donors_B,min_n_control_donors_B,mean_n_cells_A,mean_n_cells_B,condition_sha256
+imperial_eskd,fewshot,fewshot_n5/draw1,split_half_A_vs_B,,T cell,3031.0,0.9632315401466534,0.0015360296922289636,0.8610387977023546,0.0030917595430334345,0.9643429188360823,0.8634271837114863,0.9635256893702526,0.862161341779554,0.9618023398438478,0.8563891414068523,0.9649859274610241,0.863729924577704,0.9615008252220598,0.8594863970361767,0.9812714602931654,0.9905914699275203,0.9253313781157021,0.96194146293613,102.0,32.0,102.0,32.0,119807.0,119874.0,
+imperial_eskd,fewshot,fewshot_n5/draw1,split_half_A_vs_B,,B cell,3188.0,0.7676175656688374,0.003848955181822425,0.5070542434693922,0.007486358378242494,0.7735070701026971,0.5164274407106578,0.765044629282663,0.504725964465334,0.7694312420266968,0.5069179630899046,0.7659191712438559,0.5109150228501632,0.7641857156882743,0.4962848262309016,0.8685335341509616,0.9319514655554556,0.6729077545372245,0.82030954799833,102.0,32.0,102.0,32.0,22443.0,22503.0,
+imperial_eskd,fewshot,fewshot_n5/draw1,split_half_A_vs_B,,Monocyte,2883.0,0.8911355891297014,0.0022764750351935417,0.6802545052611049,0.0038417195309790237,0.8877681077202036,0.6812326718131346,0.8926178428406389,0.6798507456101678,0.8937368274214774,0.6832340529235663,0.8910687633319736,0.6830993459856324,0.8904864043342133,0.673855709973023,0.9424343703877955,0.9707905903889857,0.8097041289056339,0.8998356121568172,101.0,31.0,101.0,32.0,38235.0,38303.0,
+imperial_eskd,fewshot,fewshot_n5/draw1,split_half_A_vs_B,,NK cell,2966.0,0.9230853773625866,0.0019685736964169414,0.7251785869365992,0.004032282077805464,0.9232261809434466,0.7279242780143689,0.9228204809609103,0.7180533814406842,0.9231840805359209,0.7270382895308726,0.925873055898655,0.7266582684311115,0.9203230884739995,0.726218717265959,0.960004572057587,0.9797982302788606,0.8406997309470428,0.9168967940542941,102.0,32.0,102.0,32.0,34129.0,34197.0,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_raw,zs_raw,T cell,3031.0,0.6331406694879036,0.003205508429846803,0.44284126230161924,0.002410515036772147,0.6306668947214853,0.44357025307831854,0.6320510824078908,0.4417852812059031,0.6301931982157984,0.4397888283103387,0.6377945342454934,0.4463431830178001,0.6349976378488499,0.4427187658957356,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_raw,zs_raw,B cell,3188.0,0.5717107116081824,0.01857813042671626,0.39399547350653524,0.010288865008730204,0.5996561281958682,0.41063369084381723,0.548090194280308,0.383509102421036,0.5725843519305809,0.38795974076031847,0.5728152857126664,0.3936119117543865,0.5654075979214886,0.39426292175311795,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_raw,zs_raw,Monocyte,2883.0,0.6967602453227022,0.003343161035891297,0.48318240082485514,0.005392113221026146,0.6915931399392443,0.4768216144729021,0.700185585706528,0.49028921244151663,0.6991698758470009,0.48625812056948703,0.6960758652635974,0.4792014744346755,0.6967767598571407,0.48334158220569434,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_raw,zs_raw,NK cell,2966.0,0.6116162382621692,0.002150600604270892,0.40960481499074114,0.003136668035345115,0.6124567519399965,0.4069923615231809,0.6126714089608141,0.408273797691529,0.6096540080522113,0.41009057466806464,0.6141820910710002,0.414836839089196,0.6091169312868238,0.40783050198173515,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_pseudo,zs_pseudo,T cell,3031.0,0.6859110657664821,0.004708963166686525,0.28505033055803997,0.004901188020812014,0.6790775819854391,0.2777579758761078,0.6890306329322811,0.28493513852507774,0.6834470094885147,0.289512807427734,0.6871140659117703,0.28346963341930403,0.6908860385144053,0.2895760975419761,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_pseudo,zs_pseudo,B cell,3188.0,0.5355794684279467,0.016752419426158568,0.18938565692695594,0.008925185043060578,0.5569929214879604,0.20130433746915677,0.5177768464056547,0.17986820374704984,0.5373489601010967,0.1937093113980537,0.5457248021287955,0.19075041631756412,0.5200538120162259,0.18129601570295528,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_pseudo,zs_pseudo,Monocyte,2883.0,0.697520164214365,0.0034165451655824306,0.4844492181330267,0.005300883483538658,0.6918577544017526,0.48089736244051895,0.6977783237818801,0.48384938310272857,0.6988366963594342,0.47987844698217436,0.7010596194170787,0.4933098580542706,0.6980684271116795,0.4843110400854413,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_pseudo,zs_pseudo,NK cell,2966.0,0.706526188975045,0.004182464684886899,0.3645615596944279,0.006699750088805859,0.7118704125072335,0.3695588924368327,0.7084470468998797,0.3569415741807593,0.7033209313567141,0.37251291280484633,0.7013973367665491,0.3588079093367682,0.7075952173448491,0.3649865097129328,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_cal,zs_cal,T cell,3031.0,0.6763814334136058,0.004300945164547474,0.30594555210033086,0.0068455143199629975,0.6695990446331826,0.2956624265454709,0.6781553663199008,0.30293657545626756,0.6749382254338128,0.31052418804721443,0.6786198320025629,0.30768298194103516,0.6805946986785693,0.3129215885116663,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_cal,zs_cal,B cell,3188.0,0.554842427352338,0.023458027901157634,0.2287987494148263,0.018588673353765336,0.5833524745764938,0.2411948210944338,0.5263082223257946,0.20848851548131958,0.5651358003953152,0.25143693730382216,0.5641198064686956,0.23131349963845785,0.535295832995391,0.211559973556098,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_cal,zs_cal,Monocyte,2883.0,0.6841579592432565,0.0036622580815654482,0.46844518217907727,0.008427975222207075,0.6792763875172106,0.46285774908193145,0.6828643991785976,0.4655274612723162,0.6833954051014356,0.46011726309206646,0.6889493499398796,0.48094584349722774,0.6863042544791598,0.4727775939518445,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_cal,zs_cal,NK cell,2966.0,0.6794377311806425,0.0021677324601771467,0.3625504234745431,0.0052518097441206415,0.680330277189514,0.3656738364177412,0.6815235300313828,0.3552681817682953,0.6782934289707067,0.365656231495141,0.6762122713051995,0.3587561237441224,0.6808291484064104,0.3673977439474156,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:lora5,lora5,T cell,3031.0,0.8332945502795758,0.0015705207880031566,0.7018091577174925,0.006249410563663338,0.8351483398775417,0.7108897191295889,0.8318025329637514,0.6946264916215487,0.8318219203859853,0.7023891090513796,0.8330080023878785,0.7036334872556887,0.8346919557827214,0.697506981529257,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:lora5,lora5,B cell,3188.0,0.6402627022421726,0.02128983217865013,0.47201103262888716,0.009548801256001216,0.668807384953012,0.47637267602051164,0.6096368467853653,0.463433878112125,0.6439184048819894,0.4648275891677487,0.6442546709823852,0.4688912988961748,0.6346962036081113,0.48652972094787555,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:lora5,lora5,Monocyte,2883.0,0.7406464147054281,0.0029144507947252703,0.49579747595452817,0.0030824890258930996,0.7358463290166748,0.4932368197255691,0.742004276178916,0.4993845823845701,0.7421203968642697,0.49821399855425286,0.7400522658679294,0.49222990597162875,0.7432088055993508,0.4959220731366199,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:lora5,lora5,NK cell,2966.0,0.772572020658941,0.0027135933091052685,0.5126121957522882,0.008852452850712325,0.7767301689091338,0.527084386731184,0.7732525697451356,0.502894477798174,0.7719359880593673,0.5120895449523022,0.7693604455812959,0.5100731957596712,0.7715809309997729,0.5109193735201095,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:scsemi5,scsemi5,T cell,3031.0,0.6171553206449283,0.009142907240368259,0.5768465767503724,0.002566337941294685,0.6089143468344571,0.5809629956053725,0.617840053537365,0.5748566593688321,0.6278753071749326,0.5745220687194645,0.6241193751845552,0.5768540774159999,0.6070275204933314,0.5770370826421933,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:scsemi5,scsemi5,B cell,3188.0,0.4088119296499797,0.01380859119760641,0.3623473685915587,0.01246257604069667,0.4137268645737573,0.35606084287751355,0.40249034038141446,0.367193404529636,0.3966256943912629,0.34772458828293573,0.4307361970577404,0.3600006918839933,0.40048055184572345,0.38075731538371477,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:scsemi5,scsemi5,Monocyte,2883.0,0.5533771007154676,0.0062068276175647665,0.21185532641119442,0.007562062778307536,0.5584912942749135,0.20944842719963302,0.5597769695526355,0.2236654329099432,0.5496894703925194,0.2139798733695062,0.544840011707864,0.20359053587776157,0.5540877576494063,0.20859236269912818,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:scsemi5,scsemi5,NK cell,2966.0,0.5460473776587789,0.009865055802826114,0.38267792889428154,0.006137518470488546,0.5412476188057957,0.38382712620651704,0.5475039185580329,0.37985369326903895,0.5581251355426657,0.3821200202298643,0.5511695696946765,0.39211832220460374,0.5321906456927236,0.3754704825613835,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_raw.npz@f0a2b659,,T cell,3031.0,0.6330712575183564,0.00369431385944818,0.2376674905810033,0.006860531017904813,0.6287037181989662,0.23190984402414433,0.6306450146081378,0.22883006836687964,0.636350179513186,0.24421427246872449,0.6373487386788248,0.24263216689369843,0.6323086365926671,0.2407511011515698,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_raw.npz@f0a2b659,,B cell,3188.0,0.5928321878771456,0.016016979283232653,0.2853037955951714,0.014974427644842065,0.615103689479086,0.306785106067207,0.5763300500217975,0.2704704425735532,0.5953368395775283,0.29461987448365295,0.5991194599390259,0.27653300694857175,0.5782709003682905,0.27811054790287193,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_raw.npz@f0a2b659,,Monocyte,2883.0,0.7077039288810572,0.0025454942950823034,0.5065364863505127,0.0035148023297276692,0.7039933261453007,0.5027843188820141,0.7110215041597506,0.5060840852034306,0.7071177063823234,0.5040394501968575,0.707793451136646,0.508092717565671,0.7085936565812654,0.5116818599045904,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_raw.npz@f0a2b659,,NK cell,2966.0,0.6577372662650222,0.001698721454917909,0.351841778312162,0.010462042170152779,0.6570006863535117,0.3499677057736223,0.657152652197205,0.33458706251906634,0.6585247598793934,0.3605125970813126,0.6557797367003787,0.3552387861984049,0.6602284961946221,0.35890273998840383,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_pseudo.npz@df955ec1,,T cell,3031.0,0.8093738532482562,0.003909153729198531,0.7080861358704551,0.0049039637273295906,0.8072754332330916,0.7088872407383084,0.8060789939970228,0.7016250484416328,0.8140468632799185,0.7152868209652672,0.8131814543866562,0.7066947881461649,0.8062865213445919,0.7079367810609025,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_pseudo.npz@df955ec1,,B cell,3188.0,0.7460865369015528,0.01074539136041097,0.6018268458990856,0.0147912056577498,0.761929690580091,0.61119913427215,0.7334393111348713,0.5969249714007528,0.7423546307260115,0.5949512348451704,0.7506455133222235,0.5841471196557286,0.7420635387445668,0.621911769321627,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_pseudo.npz@df955ec1,,Monocyte,2883.0,0.7275024902219378,0.0023935125521693974,0.5021554038516394,0.0050991198221012795,0.7289456060901439,0.495932098260565,0.7280789453611329,0.50723674231092,0.7303712356538569,0.5075995642613104,0.724656333087865,0.5005340442968217,0.7254603309166907,0.49947457012857943,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_pseudo.npz@df955ec1,,NK cell,2966.0,0.7654113249926974,0.0033179669457083184,0.6560628255861605,0.004613852798435555,0.7635983207019271,0.6607275487131613,0.7685089564155454,0.6489813060705256,0.7657240421080792,0.6581668747239157,0.7684713940694362,0.658312887570105,0.7607539116684991,0.6541255108530951,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_cal.npz@5be18c1d,,T cell,3031.0,0.6957047512640104,0.006745987037996418,0.4357647724121273,0.007212310799392187,0.6898383532384702,0.432808247148445,0.6917756325572958,0.42445627760584304,0.7033185596854633,0.4415249264785986,0.7027885496293325,0.4410421112903768,0.6908026612094909,0.4389922995373731,,,,,,,,,,,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_cal.npz@5be18c1d,,B cell,3188.0,0.6379193203782709,0.019698061877476716,0.4022670622149035,0.014930362490118995,0.6609865663127564,0.4273362991292203,0.6219558939278332,0.39125313764926717,0.6346701502544476,0.40156467723365463,0.6553199480022226,0.3904795299912489,0.6166640433940945,0.40070166707112687,,,,,,,,,,,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_cal.npz@5be18c1d,,Monocyte,2883.0,0.701312619078327,0.0026623106459729724,0.482209149478935,0.004965879864600467,0.7042636764578588,0.4759018019342266,0.7040056651071452,0.48736745655219244,0.700453527607949,0.4823417321850693,0.6986006232391737,0.4787352360337428,0.6992396029795086,0.48669952068944394,,,,,,,,,,,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_cal.npz@5be18c1d,,NK cell,2966.0,0.6851595733831087,0.003608228476079533,0.4690433341851298,0.007269105906310478,0.6828893877963611,0.47122973342094615,0.6874388712739802,0.45625795385024387,0.6891832355994725,0.47447670435785755,0.6860933400740015,0.4712725641772145,0.680193032171728,0.47197971511938674,,,,,,,,,,,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_raw.npz@c2293bb9,,T cell,3031.0,0.6330712575183564,0.00369431385944818,0.2376674905810033,0.006860531017904813,0.6287037181989662,0.23190984402414433,0.6306450146081378,0.22883006836687964,0.636350179513186,0.24421427246872449,0.6373487386788248,0.24263216689369843,0.6323086365926671,0.2407511011515698,,,,,,,,,,,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_raw.npz@c2293bb9,,B cell,3188.0,0.5928321878771456,0.016016979283232653,0.2853037955951714,0.014974427644842065,0.615103689479086,0.306785106067207,0.5763300500217975,0.2704704425735532,0.5953368395775283,0.29461987448365295,0.5991194599390259,0.27653300694857175,0.5782709003682905,0.27811054790287193,,,,,,,,,,,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_raw.npz@c2293bb9,,Monocyte,2883.0,0.7077039288810572,0.0025454942950823034,0.5065364863505127,0.0035148023297276692,0.7039933261453007,0.5027843188820141,0.7110215041597506,0.5060840852034306,0.7071177063823234,0.5040394501968575,0.707793451136646,0.508092717565671,0.7085936565812654,0.5116818599045904,,,,,,,,,,,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_raw.npz@c2293bb9,,NK cell,2966.0,0.6577372662650222,0.001698721454917909,0.351841778312162,0.010462042170152779,0.6570006863535117,0.3499677057736223,0.657152652197205,0.33458706251906634,0.6585247598793934,0.3605125970813126,0.6557797367003787,0.3552387861984049,0.6602284961946221,0.35890273998840383,,,,,,,,,,,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f
+imperial_eskd,fewshot,fewshot_n5/draw1,split_half_A_vs_B,,mean4,,0.8862675180769447,0.0012876207452377096,0.6933815333423627,0.0034163963050167856,0.8872110694006075,0.6972528935624119,0.8860021606136163,0.691197858323935,0.8870386224569857,0.693394861737799,0.8869617294838772,0.6961006404611527,0.8841240084296367,0.6889614126265151,0.9380609842223774,0.9682829390377056,0.8121607481264008,0.8997458542863929,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_raw,zs_raw,mean4,,0.6283069661702393,0.0038838071188398737,0.43240598790593765,0.0015587943369151445,0.6335932286991486,0.4345044799795547,0.6232495678388852,0.4309643484399962,0.6279003585113978,0.4310243160770522,0.6302169440731893,0.43349835207401455,0.6265747317285757,0.4320384429590708,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_pseudo,zs_pseudo,mean4,,0.6563842218459597,0.0029086754403210074,0.33086169132811266,0.002857839592118892,0.6599496675955964,0.33237964205565407,0.6532582125049239,0.32639857488890384,0.65573839932644,0.3339033696532021,0.6588239560560484,0.33158445428197675,0.6541508737467899,0.3300424157608264,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:zs_cal,zs_cal,mean4,,0.6487048877974608,0.004588496233407699,0.34143497679219437,0.005268601451809678,0.6531395459791003,0.34134720828489434,0.6422128794639189,0.33305518349454966,0.6504407149753175,0.346933654984561,0.6519753149290843,0.3446746122052108,0.6457559836398826,0.3411642249917561,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:lora5,lora5,mean4,,0.7466939219715294,0.005312294957389502,0.545557465513299,0.0044612318631642705,0.7541330556890906,0.5518959004017134,0.739174056418292,0.5400848574791044,0.7474491775479029,0.5443800604314208,0.7466688462048723,0.5437069719707909,0.7460444739974891,0.5477195372834656,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,generated:scsemi5,scsemi5,mean4,,0.5313479321672887,0.005168600619616131,0.3834318001618518,0.002669265109617155,0.5305950311222309,0.38257484797225905,0.5319028205073619,0.38639229751936255,0.5330789018753451,0.3795866376504427,0.537716288411209,0.38314090684558966,0.5234466189202962,0.3854643108216049,,,,,,,,,,,
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_raw.npz@f0a2b659,,mean4,,0.6478361601353952,0.0033011890933413177,0.3453373877097124,0.006080930750301819,0.6512003550442161,0.34786174368674694,0.6437873052467227,0.33499291466573244,0.6493323713381077,0.35084654855763686,0.6500103466137188,0.34562416940158647,0.6448504224342113,0.347361562236859,,,,,,,,,,,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:all_usable_pseudo.npz@df955ec1,,mean4,,0.762093551341111,0.0030891039292336446,0.6170328028018351,0.0037281060410402573,0.7654372626513134,0.6191865054960461,0.7590265517271431,0.6136920170559578,0.7631241929419665,0.6190011236989159,0.7642386737165452,0.6124222099172051,0.7586410756685871,0.620862157841051,,,,,,,,,,,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_cal.npz@5be18c1d,,mean4,,0.6800240660259294,0.005885183268292783,0.44732107957277395,0.004802806884948065,0.6844944959513617,0.45181902040820954,0.6762940157165636,0.4398337064143866,0.6819063682868332,0.44997701006379504,0.6857006152361825,0.44538236037314577,0.6717248349387055,0.44959330060433267,,,,,,,,,,,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122
+imperial_eskd,fewshot,fewshot_n5/draw1,broadcast:test_raw.npz@c2293bb9,,mean4,,0.6478361601353952,0.0033011890933413177,0.3453373877097124,0.006080930750301819,0.6512003550442161,0.34786174368674694,0.6437873052467227,0.33499291466573244,0.6493323713381077,0.35084654855763686,0.6500103466137188,0.34562416940158647,0.6448504224342113,0.347361562236859,,,,,,,,,,,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw1/contrast.csv

@@ -0,0 +1,51 @@
+dataset,design,unit,arm,celltype,statistic,label,n_genes,pearson_r_generated,spearman_r_generated,pearson_r_broadcast,spearman_r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast,condition,condition_sha256,pearson_r_generated_scorer,pearson_r_broadcast_scorer,partial_r_generated_given_broadcast_scorer,r_generated_vs_broadcast_scorer
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,T cell,mean_cp10k,"Zero-shot, real bulk",3031.0,0.6365108503756747,0.4517015617221279,0.6393101171199623,0.24193364882140656,0.448720965231846,0.5420902194467659,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6365108503756747,0.6393101171199623,0.448720965231846,0.5420902194467659
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,T cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3031.0,0.4360170957310643,0.27742437362920724,0.6360064629967949,0.4576560052425667,0.1472131973178753,0.5346042050566813,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.4360170957310643,0.6360064629967949,0.1472131973178753,0.5346042050566813
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,B cell,mean_cp10k,"Zero-shot, real bulk",3188.0,0.584160874258901,0.41140135503951303,0.6236351264700181,0.3135804182461165,0.43840463835796245,0.4444222286280049,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.584160874258901,0.6236351264700181,0.4384046383579624,0.4444222286280049
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,B cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",3188.0,0.3395297348596239,0.23389561093482422,0.4862172069397853,0.3712966943856046,0.19456926875512248,0.3740028722522588,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.3395297348596239,0.4862172069397853,0.1945692687551224,0.3740028722522588
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,Monocyte,mean_cp10k,"Zero-shot, real bulk",2883.0,0.7012663474615103,0.5019506815963035,0.7132449085093915,0.528980054828998,0.3952574145471984,0.7094682595457753,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.7012663474615103,0.7132449085093915,0.3952574145471984,0.7094682595457753
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, real bulk",2883.0,0.6487103565113198,0.5369418310679409,0.7072577030580933,0.5545236397789461,0.34770145107712874,0.6544250068803418,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6487103565113198,0.7072577030580933,0.3477014510771287,0.6544250068803418
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,NK cell,mean_cp10k,"Zero-shot, real bulk",2966.0,0.6207659901237167,0.4298034149971177,0.6685247181490744,0.36628680845159084,0.3805935941322027,0.5852611068238337,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.6207659901237167,0.6685247181490744,0.3805935941322027,0.5852611068238337
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,NK cell,pseudobulk_log1p_cpm,"Zero-shot, real bulk",2966.0,0.40769881865695323,0.30115648787744653,0.5979896628156075,0.43585835028951786,0.1687757017999423,0.4838041836506835,all_usable_raw.npz@f0a2b659,f0a2b659a4596ce745beab389dfd02e39cc318bf8552ffa6561d91d74e12ed7e,0.4076988186569532,0.5979896628156075,0.1687757017999423,0.4838041836506835
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,T cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3031.0,0.6899597242666505,0.28856176338670403,0.8172952250921222,0.7318212828317441,0.3726885196804352,0.6429512266437694,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.6899597242666505,0.8172952250921222,0.3726885196804352,0.6429512266437694
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,T cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3031.0,0.5394842295177154,0.3408818266007131,0.7696604655781719,0.6676262741917383,0.1757330944466131,0.5824412720895852,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5394842295177154,0.7696604655781719,0.1757330944466131,0.5824412720895852
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,B cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",3188.0,0.5627566402469406,0.21026230104639737,0.7728153066605544,0.6368084595046312,0.22680064961126703,0.5759339132150121,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.5627566402469406,0.7728153066605544,0.226800649611267,0.5759339132150121
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,B cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",3188.0,0.43470948656058256,0.354001224605469,0.5209883270775192,0.44656387019415905,0.2964687694453782,0.3863976841687126,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.4347094865605825,0.5209883270775192,0.2964687694453782,0.3863976841687126
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,Monocyte,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",2883.0,0.7023993672440625,0.5024890491308003,0.7337646265066289,0.5236053839952435,0.3808466544092496,0.7083426530081041,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.7023993672440625,0.7337646265066289,0.3808466544092496,0.7083426530081041
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,Monocyte,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",2883.0,0.6029883682261196,0.45723713947989947,0.6727902465586968,0.5225374396263714,0.3352213412900836,0.6018668266126056,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.6029883682261196,0.6727902465586968,0.3352213412900836,0.6018668266126056
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,NK cell,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",2966.0,0.7208919522951382,0.38493883941720136,0.7787533816512616,0.6962506099673025,0.5011571518548558,0.6039263729491221,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.7208919522951382,0.7787533816512616,0.5011571518548558,0.6039263729491221
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,NK cell,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",2966.0,0.4911237937574999,0.34276676655593796,0.73553998808955,0.6379465465888281,0.20702855718983187,0.5028839548043534,all_usable_pseudo.npz@df955ec1,df955ec13ab46cc784fca41230058be72bebe5d7b879c520854d1638a715cfaa,0.4911237937574999,0.73553998808955,0.2070285571898318,0.5028839548043534
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,T cell,mean_cp10k,Zero-shot + calibration,3031.0,0.6810827819169679,0.3124417143611817,0.7023366890580498,0.44971922578534784,0.4104519462304478,0.6556104761484489,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.6810827819169679,0.7023366890580498,0.4104519462304478,0.6556104761484489
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,T cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3031.0,0.5216241460354497,0.3215211090283844,0.6432553305044221,0.47441430013413405,0.1816730506492826,0.6458140618988633,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.5216241460354497,0.6432553305044221,0.1816730506492826,0.6458140618988633
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,B cell,mean_cp10k,Zero-shot + calibration,3188.0,0.5804803169326684,0.25075938623938776,0.6654422363552887,0.43563556608139054,0.286947648926449,0.6196993249058452,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.5804803169326684,0.6654422363552887,0.286947648926449,0.6196993249058452
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,B cell,pseudobulk_log1p_cpm,Zero-shot + calibration,3188.0,0.42617291543359903,0.33728357175653967,0.48688137760239264,0.36778839347479725,0.22770981452300482,0.5285154256293176,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.426172915433599,0.4868813776023926,0.2277098145230048,0.5285154256293176
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,Monocyte,mean_cp10k,Zero-shot + calibration,2883.0,0.6892773861036205,0.484402129045673,0.7070211239785472,0.503439217664084,0.4071189004498523,0.6741259755724712,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.6892773861036205,0.7070211239785472,0.4071189004498523,0.6741259755724712
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,Monocyte,pseudobulk_log1p_cpm,Zero-shot + calibration,2883.0,0.5895785580057123,0.44590700169809944,0.7104518622158544,0.5632542932987644,0.2597147855858613,0.63009448414138,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.5895785580057123,0.7104518622158544,0.2597147855858613,0.63009448414138
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,NK cell,mean_cp10k,Zero-shot + calibration,2966.0,0.6922711508118564,0.37555309102710277,0.699600288676364,0.4944557578095675,0.4337248918036951,0.6546636041229674,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.6922711508118564,0.699600288676364,0.4337248918036951,0.6546636041229674
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,NK cell,pseudobulk_log1p_cpm,Zero-shot + calibration,2966.0,0.4684592174288649,0.31319834027654175,0.6032643987573157,0.44373495301878985,0.20696159787815172,0.5475978619605113,test_cal.npz@5be18c1d,5be18c1d38d6ceaff24a0c65ee8e24b01fed242d17265141af0491c36c941122,0.4684592174288649,0.6032643987573157,0.2069615978781517,0.5475978619605113
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,T cell,mean_cp10k,"LoRA, 5 donors",3031.0,0.840382478631967,0.7253634239688497,0.6393101171199623,0.24193364882140656,0.7696640739061631,0.5287985622242685,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.840382478631967,0.6393101171199623,0.7696640739061631,0.5287985622242685
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,T cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",3031.0,0.7528073080369456,0.6395760264357829,0.6360064629967949,0.4576560052425667,0.6002693251625792,0.60218695879157,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.7528073080369456,0.6360064629967949,0.6002693251625792,0.60218695879157
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,B cell,mean_cp10k,"LoRA, 5 donors",3188.0,0.6581147386346861,0.49283517428177115,0.6236351264700181,0.3135804182461165,0.4976355034632204,0.5240091193967077,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.6581147386346861,0.6236351264700181,0.4976355034632204,0.5240091193967077
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,B cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",3188.0,0.4312048621872462,0.3474131742533097,0.4862172069397853,0.3712966943856046,0.2550854866488708,0.4862620511878224,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.4312048621872462,0.4862172069397853,0.2550854866488708,0.4862620511878224
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,Monocyte,mean_cp10k,"LoRA, 5 donors",2883.0,0.7452340753019923,0.5118208049763187,0.7132449085093915,0.528980054828998,0.49232943886746755,0.6987366295124475,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.7452340753019923,0.7132449085093915,0.4923294388674675,0.6987366295124475
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,Monocyte,pseudobulk_log1p_cpm,"LoRA, 5 donors",2883.0,0.6290949040457883,0.48341391193005084,0.7072577030580933,0.5545236397789461,0.3410223400633857,0.6227851105734994,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.6290949040457883,0.7072577030580933,0.3410223400633857,0.6227851105734994
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,NK cell,mean_cp10k,"LoRA, 5 donors",2966.0,0.7846294796600775,0.5391513773815119,0.6685247181490744,0.36628680845159084,0.6585748102267228,0.5735116141637583,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.7846294796600775,0.6685247181490744,0.6585748102267228,0.5735116141637583
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,NK cell,pseudobulk_log1p_cpm,"LoRA, 5 donors",2966.0,0.5471210873869697,0.41123805007251785,0.5979896628156075,0.43585835028951786,0.3613277610880066,0.49379971066648665,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.5471210873869697,0.5979896628156075,0.3613277610880066,0.4937997106664866
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,T cell,mean_cp10k,"scSemiProfiler, 5 donors",3031.0,0.6216931467766444,0.5964904760433616,0.6393101171199623,0.24193364882140656,0.587625625406497,0.29770740155278297,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.6216931467766444,0.6393101171199623,0.587625625406497,0.2977074015527829
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,T cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",3031.0,0.354945755824924,0.3273192977682213,0.6360064629967949,0.4576560052425667,0.30141858731094423,0.19973514031339598,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.354945755824924,0.6360064629967949,0.3014185873109442,0.1997351403133959
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,B cell,mean_cp10k,"scSemiProfiler, 5 donors",3188.0,0.3921663727078082,0.35939069064155704,0.6236351264700181,0.3135804182461165,0.3361144783575504,0.21762364053770225,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.3921663727078082,0.6236351264700181,0.3361144783575504,0.2176236405377022
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,B cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",3188.0,-0.0007962257691689206,-0.009989161253139249,0.4862172069397853,0.3712966943856046,-0.08450124911923894,0.1485446568414446,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,-0.0007962257691689,0.4862172069397853,-0.0845012491192389,0.1485446568414446
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,Monocyte,mean_cp10k,"scSemiProfiler, 5 donors",2883.0,0.5567156938097007,0.21623849116918334,0.7132449085093915,0.528980054828998,0.31423851689297394,0.5160238834129596,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.5567156938097007,0.7132449085093915,0.3142385168929739,0.5160238834129596
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,Monocyte,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",2883.0,0.34403585059374175,0.2911720403497681,0.7072577030580933,0.5545236397789461,0.12158099904456728,0.37371268811719577,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.3440358505937417,0.7072577030580933,0.1215809990445672,0.3737126881171957
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,NK cell,mean_cp10k,"scSemiProfiler, 5 donors",2966.0,0.5605587256909219,0.4053649702428064,0.6685247181490744,0.36628680845159084,0.4901638715921738,0.32232842747444074,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.5605587256909219,0.6685247181490744,0.4901638715921738,0.3223284274744407
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,NK cell,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",2966.0,0.22165681800752213,0.1604639061159602,0.5979896628156075,0.43585835028951786,0.12545272735909002,0.2061330120076724,test_raw.npz@c2293bb9,c2293bb938f0dbf9c76063b305230e4ad0b9bec482e4fe5dfcf38a110511283f,0.2216568180075221,0.5979896628156075,0.12545272735909,0.2061330120076724
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,mean4,mean_cp10k,"Zero-shot, real bulk",,0.6356760155549507,0.4487142533387655,0.6611787175621116,0.362695232587028,0.4157441530673024,0.570310453611095,,,0.6356760155549507,0.6611787175621116,0.4157441530673024,0.570310453611095
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,mean4,pseudobulk_log1p_cpm,"Zero-shot, real bulk",,0.4579890014397403,0.33735457587735473,0.6068677589525703,0.45483367242415884,0.21456490473751721,0.5117090669599914,,,0.4579890014397403,0.6068677589525703,0.21456490473751716,0.5117090669599914
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,mean4,mean_cp10k,"Zero-shot, sc pseudobulk input (reference)",,0.669001921013198,0.34656298824527576,0.7756571349776418,0.6471214340747303,0.3703732438889519,0.6327885414540019,,,0.669001921013198,0.7756571349776418,0.3703732438889519,0.6327885414540019
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,mean4,pseudobulk_log1p_cpm,"Zero-shot, sc pseudobulk input (reference)",,0.5170764695154793,0.3737217393105049,0.6747447568259844,0.5686685326502743,0.2536129405929767,0.5183974344188143,,,0.5170764695154793,0.6747447568259844,0.2536129405929767,0.5183974344188143
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,mean4,mean_cp10k,Zero-shot + calibration,,0.6607779089412783,0.3557890801683363,0.6936000845170623,0.4708124418350974,0.38456084685261105,0.6510248451874332,,,0.6607779089412783,0.6936000845170623,0.38456084685261105,0.6510248451874332
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,mean4,pseudobulk_log1p_cpm,Zero-shot + calibration,,0.5014587092259065,0.3544775056898913,0.6109632422699962,0.46229798498162133,0.21901481215907512,0.5880054584075181,,,0.5014587092259065,0.6109632422699962,0.21901481215907512,0.5880054584075181
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,mean4,mean_cp10k,"LoRA, 5 donors",,0.7570901930571807,0.5672926951521128,0.6611787175621116,0.362695232587028,0.6045509566158934,0.5812639813242955,,,0.7570901930571807,0.6611787175621116,0.6045509566158934,0.5812639813242955
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,mean4,pseudobulk_log1p_cpm,"LoRA, 5 donors",,0.5900570404142375,0.47041029067291534,0.6068677589525703,0.45483367242415884,0.3894262282407106,0.5512584578048446,,,0.5900570404142375,0.6068677589525703,0.3894262282407106,0.5512584578048446
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,mean4,mean_cp10k,"scSemiProfiler, 5 donors",,0.5327834847462688,0.3943711570242271,0.6611787175621116,0.362695232587028,0.4320356230622988,0.3384208382444714,,,0.5327834847462688,0.6611787175621116,0.4320356230622988,0.33842083824447133
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,mean4,pseudobulk_log1p_cpm,"scSemiProfiler, 5 donors",,0.22996054966425475,0.1922415207452026,0.6068677589525703,0.45483367242415884,0.11598776614884064,0.23203137431992718,,,0.22996054966425475,0.6068677589525703,0.11598776614884063,0.23203137431992715

paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/imperial_eskd/fewshot_n5/draw1/deg_limma.csv

@@ -0,0 +1,76 @@
+dataset,design,unit,arm,celltype,method,deg_scored,pred_defined,overlap,overlap_scorer,obs_list_size,gen_list_size,n_sig_obs,n_sig_gen,n_tested_obs,n_tested_gen,G_both,chance_overlap,broadcast_overlap,broadcast_overlap_scorer,broadcast_list_size,n_sig_broadcast,n_tested_broadcast,G_both_broadcast,broadcast_chance_overlap,condition
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,T cell,welch,True,True,27,27.0,50,50,827,1146,5745,4896,4876,0.5127153404429861,17,17.0,50,1949,5823,5646,0.44279135671271697,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,B cell,welch,True,True,22,22.0,50,50,255,442,5632,4285,4264,0.5863039399624765,13,13.0,50,1949,5823,5535,0.45167118337850043,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,Monocyte,welch,True,True,29,29.0,50,50,260,1292,5620,4975,4916,0.5085435313262815,24,24.0,50,1949,5823,5525,0.45248868778280543,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,NK cell,welch,True,True,21,21.0,50,50,386,803,5579,4444,4420,0.5656108597285068,17,17.0,50,1949,5823,5482,0.45603794235680406,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,DC,welch,True,True,7,7.0,50,50,242,303,5423,4004,3983,0.6276675872457946,15,15.0,50,1949,5823,5330,0.46904315196998125,all_usable_raw.npz@f0a2b659
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,T cell,welch,True,True,30,30.0,50,50,827,609,5745,4764,4752,0.5260942760942761,21,21.0,50,1616,5846,5745,0.4351610095735422,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,B cell,welch,True,True,19,19.0,50,50,255,305,5632,3989,3983,0.6276675872457946,18,18.0,50,1616,5846,5632,0.44389204545454547,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,Monocyte,welch,True,True,25,25.0,50,50,260,608,5620,4297,4288,0.5830223880597015,26,26.0,50,1616,5846,5620,0.44483985765124556,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,NK cell,welch,True,True,20,20.0,50,50,386,325,5579,4152,4147,0.6028454304316373,20,20.0,50,1616,5846,5579,0.4481089801039613,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,DC,welch,True,True,8,8.0,50,50,242,98,5423,3635,3630,0.6887052341597796,22,22.0,50,1616,5846,5423,0.46099944680066385,all_usable_pseudo.npz@df955ec1
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,T cell,welch,True,True,28,28.0,50,50,827,1128,5745,4792,4782,0.5227938101212881,21,21.0,50,1951,5823,5646,0.44279135671271697,test_cal.npz@5be18c1d
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,B cell,welch,True,True,22,22.0,50,50,255,393,5632,4094,4089,0.6113964294448521,18,18.0,50,1951,5823,5535,0.45167118337850043,test_cal.npz@5be18c1d
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,Monocyte,welch,True,True,26,26.0,50,50,260,1020,5620,4446,4433,0.5639521768554027,24,24.0,50,1951,5823,5525,0.45248868778280543,test_cal.npz@5be18c1d
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