Archive 4 checkpoints (1-4)
Browse files- paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/training_ilc_marker_counts.parquet +3 -0
- paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/verification.json +2655 -0
- paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/verification_attempt01_resources.txt +24 -0
- paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/verification_resources.txt +23 -0
paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/training_ilc_marker_counts.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:8ca32ab1a281120b5852d1cf7583843438409c3baa10b2e7d530f396a406e2ea
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size 819437
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paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/verification.json
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|
| 2633 |
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{
|
| 2634 |
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"dataset_id": "300b_A_GSE132802_DRESS_DiHS_PBMC_only_scRNAseq",
|
| 2635 |
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"recorded_path": "/home/sj_server_1/gblee/datalake/single-cell-RNA-seq-datasets/_staged_new_blocks/300b_A_GSE132802_DRESS_DiHS_PBMC_only_scRNAseq/300b_A_GSE132802_DRESS_DiHS_PBMC_only_scRNAseq.raw_counts.h5ad",
|
| 2636 |
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"reason": "Historical original H5AD path is absent locally; canonical CSR replay remains available and verified."
|
| 2637 |
+
},
|
| 2638 |
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{
|
| 2639 |
+
"dataset_id": "301_A_GSE163121_SLE_healthy_Bcell_PBMC_scRNAseq",
|
| 2640 |
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"recorded_path": "/home/sj_server_1/gblee/datalake/single-cell-RNA-seq-datasets/_staged_new_blocks/301_A_GSE163121_SLE_healthy_Bcell_PBMC_scRNAseq/301_A_GSE163121_SLE_healthy_Bcell_PBMC_scRNAseq.raw_counts.h5ad",
|
| 2641 |
+
"reason": "Historical original H5AD path is absent locally; canonical CSR replay remains available and verified."
|
| 2642 |
+
},
|
| 2643 |
+
{
|
| 2644 |
+
"dataset_id": "302_A_GSE314010_SLE_IL36_stim_PBMC_scRNAseq",
|
| 2645 |
+
"recorded_path": "/home/sj_server_1/gblee/datalake/single-cell-RNA-seq-datasets/_staged_new_blocks/302_A_GSE314010_SLE_IL36_stim_PBMC_scRNAseq/302_A_GSE314010_SLE_IL36_stim_PBMC_scRNAseq.raw_counts.h5ad",
|
| 2646 |
+
"reason": "Historical original H5AD path is absent locally; canonical CSR replay remains available and verified."
|
| 2647 |
+
},
|
| 2648 |
+
{
|
| 2649 |
+
"dataset_id": "304_A_Parse_10M_PBMC_12donor_90cytokines",
|
| 2650 |
+
"recorded_path": "/home/sj_server_1/gblee/datalake/single-cell-RNA-seq-datasets/_staged_new_blocks/304_A_Parse_10M_PBMC_12donor_90cytokines_parts/part_000.h5ad",
|
| 2651 |
+
"reason": "Historical original H5AD path is absent locally; canonical CSR replay remains available and verified."
|
| 2652 |
+
}
|
| 2653 |
+
],
|
| 2654 |
+
"source_label_is_not_independently_verified_biological_identity": true
|
| 2655 |
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}
|
paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/verification_attempt01_resources.txt
ADDED
|
@@ -0,0 +1,24 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
Command exited with non-zero status 1
|
| 2 |
+
Command being timed: "/home/sj_server_1/miniforge3/bin/python /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/audit_training_ilc.py verify"
|
| 3 |
+
User time (seconds): 3.53
|
| 4 |
+
System time (seconds): 0.43
|
| 5 |
+
Percent of CPU this job got: 95%
|
| 6 |
+
Elapsed (wall clock) time (h:mm:ss or m:ss): 0:04.13
|
| 7 |
+
Average shared text size (kbytes): 0
|
| 8 |
+
Average unshared data size (kbytes): 0
|
| 9 |
+
Average stack size (kbytes): 0
|
| 10 |
+
Average total size (kbytes): 0
|
| 11 |
+
Maximum resident set size (kbytes): 308004
|
| 12 |
+
Average resident set size (kbytes): 0
|
| 13 |
+
Major (requiring I/O) page faults: 5
|
| 14 |
+
Minor (reclaiming a frame) page faults: 68481
|
| 15 |
+
Voluntary context switches: 7229
|
| 16 |
+
Involuntary context switches: 48
|
| 17 |
+
Swaps: 0
|
| 18 |
+
File system inputs: 98216
|
| 19 |
+
File system outputs: 0
|
| 20 |
+
Socket messages sent: 0
|
| 21 |
+
Socket messages received: 0
|
| 22 |
+
Signals delivered: 0
|
| 23 |
+
Page size (bytes): 4096
|
| 24 |
+
Exit status: 1
|
paper-releases/pbisc-diffusion/updates/20261015T141849Z-rare-cell-7k-8k-panels/diffusion/dataset/server_1/model8/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/verification_resources.txt
ADDED
|
@@ -0,0 +1,23 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
Command being timed: "/home/sj_server_1/miniforge3/bin/python /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/rare_gene_context_expansion_20261015/coordination/ilc_training_support/audit_training_ilc.py verify"
|
| 2 |
+
User time (seconds): 4.92
|
| 3 |
+
System time (seconds): 0.48
|
| 4 |
+
Percent of CPU this job got: 99%
|
| 5 |
+
Elapsed (wall clock) time (h:mm:ss or m:ss): 0:05.43
|
| 6 |
+
Average shared text size (kbytes): 0
|
| 7 |
+
Average unshared data size (kbytes): 0
|
| 8 |
+
Average stack size (kbytes): 0
|
| 9 |
+
Average total size (kbytes): 0
|
| 10 |
+
Maximum resident set size (kbytes): 308552
|
| 11 |
+
Average resident set size (kbytes): 0
|
| 12 |
+
Major (requiring I/O) page faults: 0
|
| 13 |
+
Minor (reclaiming a frame) page faults: 68564
|
| 14 |
+
Voluntary context switches: 9130
|
| 15 |
+
Involuntary context switches: 31
|
| 16 |
+
Swaps: 0
|
| 17 |
+
File system inputs: 29424
|
| 18 |
+
File system outputs: 136
|
| 19 |
+
Socket messages sent: 0
|
| 20 |
+
Socket messages received: 0
|
| 21 |
+
Signals delivered: 0
|
| 22 |
+
Page size (bytes): 4096
|
| 23 |
+
Exit status: 0
|