junidude14 commited on
Commit
487b37c
·
verified ·
1 Parent(s): 7c28051

Archive 4 checkpoints (1-4)

Browse files
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/immicro/cv3/state_types.tsv ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ state type n_cells
2
+ B cell|Effector B cell B cell 1792
3
+ B cell|Memory B cell B cell 14451
4
+ B cell|Naive B cell B cell 5335
5
+ B cell|Plasma cell B cell 421
6
+ B cell|Transitional B cell B cell 1492
7
+ DC|ASDC DC 188
8
+ DC|cDC1 DC 335
9
+ DC|cDC2 DC 5213
10
+ DC|pDC DC 1401
11
+ Monocyte|CD14 monocyte Monocyte 38652
12
+ Monocyte|CD16 monocyte Monocyte 8182
13
+ Monocyte|Intermediate monocyte Monocyte 4769
14
+ NK cell|CD56bright NK cell NK cell 5785
15
+ NK cell|CD56dim NK cell NK cell 17576
16
+ NK cell|Proliferating NK cell NK cell 4712
17
+ Other|Erythrocyte Other 321
18
+ Other|ILC Other 957
19
+ Other|Platelet Other 52
20
+ Other|Progenitor cell Other 493
21
+ T cell|CD8aa T cell 12145
22
+ T cell|DN T cell T cell 2195
23
+ T cell|MAIT T cell 10276
24
+ T cell|Memory CD4 T cell T cell 48009
25
+ T cell|Memory CD8 T cell T cell 23323
26
+ T cell|Naive CD4 T cell T cell 51889
27
+ T cell|Naive CD8 T cell T cell 30485
28
+ T cell|Proliferating T cell T cell 545
29
+ T cell|Treg T cell 11882
30
+ T cell|gdT T cell 14929
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/immicro/cv3_full/SPLIT.json ADDED
@@ -0,0 +1,146 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "dataset": "immicro",
3
+ "kind": "cv",
4
+ "idx": 3,
5
+ "reference": [
6
+ "HS2",
7
+ "HS6",
8
+ "HS7",
9
+ "HS8",
10
+ "HS9",
11
+ "HS11",
12
+ "HS12",
13
+ "HS13",
14
+ "HS14",
15
+ "HS16",
16
+ "HS17",
17
+ "HS18",
18
+ "HS19",
19
+ "HS20",
20
+ "HS21",
21
+ "HS24",
22
+ "HS25",
23
+ "HS26",
24
+ "HS27",
25
+ "HS31",
26
+ "HS32",
27
+ "HS34",
28
+ "HS35",
29
+ "HS36",
30
+ "HS38",
31
+ "HS39",
32
+ "HS41",
33
+ "HS42",
34
+ "HS43",
35
+ "HS44",
36
+ "HS46",
37
+ "HS47",
38
+ "HS48",
39
+ "HS50",
40
+ "HS51",
41
+ "HS52",
42
+ "HS54",
43
+ "HS55",
44
+ "HS56",
45
+ "HS58",
46
+ "HS59",
47
+ "HS60",
48
+ "HS64",
49
+ "HS65",
50
+ "HS66",
51
+ "HS67",
52
+ "HS68",
53
+ "HS70",
54
+ "HS71",
55
+ "HS72",
56
+ "HS73",
57
+ "HS74",
58
+ "HS75",
59
+ "HS76",
60
+ "HS77",
61
+ "HS80",
62
+ "HS81",
63
+ "HS82",
64
+ "HS83",
65
+ "HS84",
66
+ "HS85",
67
+ "HS86",
68
+ "HS87",
69
+ "HS88",
70
+ "HS91",
71
+ "HS92",
72
+ "HS93",
73
+ "HS94",
74
+ "HS96",
75
+ "HS97",
76
+ "HS98",
77
+ "HS102",
78
+ "HS103",
79
+ "HS104",
80
+ "HS105",
81
+ "HS107",
82
+ "HS108",
83
+ "HS109",
84
+ "HS111",
85
+ "HS3",
86
+ "HS28",
87
+ "HS37",
88
+ "HS45",
89
+ "HS57",
90
+ "HS95",
91
+ "HS101"
92
+ ],
93
+ "mixture": [
94
+ "HS1",
95
+ "HS4",
96
+ "HS10",
97
+ "HS15",
98
+ "HS23",
99
+ "HS29",
100
+ "HS30",
101
+ "HS40",
102
+ "HS49",
103
+ "HS53",
104
+ "HS61",
105
+ "HS62",
106
+ "HS63",
107
+ "HS69",
108
+ "HS78",
109
+ "HS79",
110
+ "HS89",
111
+ "HS90",
112
+ "HS100",
113
+ "HS106",
114
+ "HS110"
115
+ ],
116
+ "run_json_check": true,
117
+ "n_train_rows": 79,
118
+ "n_inner_val_rows": 7,
119
+ "n_reference_samples": 86,
120
+ "n_mixture_samples": 21,
121
+ "reference_cells": 317805,
122
+ "states": 29,
123
+ "states_merged_minor": 0,
124
+ "types": [
125
+ "B cell",
126
+ "DC",
127
+ "Monocyte",
128
+ "NK cell",
129
+ "Other",
130
+ "T cell"
131
+ ],
132
+ "missing_types": [],
133
+ "bp_axis_genes": 15404,
134
+ "genes_kept": 15216,
135
+ "genes_dropped_not_bulk_valid": 17,
136
+ "genes_dropped_zero_reference": 171,
137
+ "gene_mode": "full",
138
+ "aggregates_sha256": "4215e1c95c8ff835ea4867157ac47c5ae1b7cc8c51c4f4b5457e4c2e537b9aca",
139
+ "files": {
140
+ "reference.tsv.gz": "7c76c574dd7f528856615ae35b3b2dd2d1ef2d82fa31d9350f4045528293f12a",
141
+ "state_types.tsv": "04619d84d6a83674b4e2fc861c44b4e02b3311b11fa789dea0c995e6b7a29ed0",
142
+ "mixture.tsv.gz": "2f34dddf5bdcf565bdd7ae3989e610aa9c906bfe6ad5a0b771ec443b5da3e6eb"
143
+ },
144
+ "tool_sha256": "bb7df6866fa6c477bb1ddcf0e520d615346852be91adcb4d0bfdc2fac51e8bf0",
145
+ "common_sha256": "6f6e873744fff7d06ff3495b058bdceaa572fce7a932eb0fc6addb74f0711875"
146
+ }
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/immicro/cv3_full/state_types.tsv ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ state type n_cells
2
+ B cell|Effector B cell B cell 1792
3
+ B cell|Memory B cell B cell 14451
4
+ B cell|Naive B cell B cell 5335
5
+ B cell|Plasma cell B cell 421
6
+ B cell|Transitional B cell B cell 1492
7
+ DC|ASDC DC 188
8
+ DC|cDC1 DC 335
9
+ DC|cDC2 DC 5213
10
+ DC|pDC DC 1401
11
+ Monocyte|CD14 monocyte Monocyte 38652
12
+ Monocyte|CD16 monocyte Monocyte 8182
13
+ Monocyte|Intermediate monocyte Monocyte 4769
14
+ NK cell|CD56bright NK cell NK cell 5785
15
+ NK cell|CD56dim NK cell NK cell 17576
16
+ NK cell|Proliferating NK cell NK cell 4712
17
+ Other|Erythrocyte Other 321
18
+ Other|ILC Other 957
19
+ Other|Platelet Other 52
20
+ Other|Progenitor cell Other 493
21
+ T cell|CD8aa T cell 12145
22
+ T cell|DN T cell T cell 2195
23
+ T cell|MAIT T cell 10276
24
+ T cell|Memory CD4 T cell T cell 48009
25
+ T cell|Memory CD8 T cell T cell 23323
26
+ T cell|Naive CD4 T cell T cell 51889
27
+ T cell|Naive CD8 T cell T cell 30485
28
+ T cell|Proliferating T cell T cell 545
29
+ T cell|Treg T cell 11882
30
+ T cell|gdT T cell 14929
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/immicro/cv4/SPLIT.json ADDED
@@ -0,0 +1,145 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "dataset": "immicro",
3
+ "kind": "cv",
4
+ "idx": 4,
5
+ "reference": [
6
+ "HS1",
7
+ "HS2",
8
+ "HS3",
9
+ "HS4",
10
+ "HS6",
11
+ "HS7",
12
+ "HS9",
13
+ "HS10",
14
+ "HS12",
15
+ "HS13",
16
+ "HS14",
17
+ "HS15",
18
+ "HS16",
19
+ "HS17",
20
+ "HS18",
21
+ "HS19",
22
+ "HS21",
23
+ "HS24",
24
+ "HS25",
25
+ "HS26",
26
+ "HS29",
27
+ "HS30",
28
+ "HS31",
29
+ "HS32",
30
+ "HS35",
31
+ "HS36",
32
+ "HS37",
33
+ "HS39",
34
+ "HS40",
35
+ "HS42",
36
+ "HS43",
37
+ "HS44",
38
+ "HS46",
39
+ "HS47",
40
+ "HS48",
41
+ "HS49",
42
+ "HS50",
43
+ "HS51",
44
+ "HS52",
45
+ "HS53",
46
+ "HS55",
47
+ "HS57",
48
+ "HS58",
49
+ "HS59",
50
+ "HS60",
51
+ "HS61",
52
+ "HS63",
53
+ "HS65",
54
+ "HS66",
55
+ "HS67",
56
+ "HS68",
57
+ "HS69",
58
+ "HS71",
59
+ "HS73",
60
+ "HS78",
61
+ "HS79",
62
+ "HS80",
63
+ "HS81",
64
+ "HS82",
65
+ "HS83",
66
+ "HS84",
67
+ "HS85",
68
+ "HS89",
69
+ "HS90",
70
+ "HS91",
71
+ "HS92",
72
+ "HS95",
73
+ "HS96",
74
+ "HS98",
75
+ "HS100",
76
+ "HS101",
77
+ "HS102",
78
+ "HS105",
79
+ "HS106",
80
+ "HS107",
81
+ "HS108",
82
+ "HS109",
83
+ "HS110",
84
+ "HS111",
85
+ "HS23",
86
+ "HS34",
87
+ "HS38",
88
+ "HS56",
89
+ "HS62",
90
+ "HS72",
91
+ "HS86"
92
+ ],
93
+ "mixture": [
94
+ "HS8",
95
+ "HS11",
96
+ "HS20",
97
+ "HS27",
98
+ "HS28",
99
+ "HS41",
100
+ "HS45",
101
+ "HS54",
102
+ "HS64",
103
+ "HS70",
104
+ "HS74",
105
+ "HS75",
106
+ "HS76",
107
+ "HS77",
108
+ "HS87",
109
+ "HS88",
110
+ "HS93",
111
+ "HS94",
112
+ "HS97",
113
+ "HS103",
114
+ "HS104"
115
+ ],
116
+ "run_json_check": true,
117
+ "n_train_rows": 79,
118
+ "n_inner_val_rows": 7,
119
+ "n_reference_samples": 86,
120
+ "n_mixture_samples": 21,
121
+ "reference_cells": 313823,
122
+ "states": 29,
123
+ "states_merged_minor": 0,
124
+ "types": [
125
+ "B cell",
126
+ "DC",
127
+ "Monocyte",
128
+ "NK cell",
129
+ "Other",
130
+ "T cell"
131
+ ],
132
+ "missing_types": [],
133
+ "bp_axis_genes": 5492,
134
+ "genes_kept": 5468,
135
+ "genes_dropped_not_bulk_valid": 0,
136
+ "genes_dropped_zero_reference": 24,
137
+ "aggregates_sha256": "7b6b34edb120956685ca3bf8081babec375584c1dfc8c8eb3800fb1154fe598f",
138
+ "files": {
139
+ "reference.tsv.gz": "d52e3c6c65ec56dbe4888cb01dedc178ec5bb19201a2e52ecbca4b767fa64f45",
140
+ "state_types.tsv": "1980e03574fd56adb6362e41d9636496b6a8ebed7d3a23074d33d82c9185b450",
141
+ "mixture.tsv.gz": "fa45157cf6739e45de7b02848826fdb611c1412057c9ecf94f1800f31b62f2d4"
142
+ },
143
+ "tool_sha256": "70832dddc182ad1955d44d228bd08240649f355c2bc4f41856eea62e24620afc",
144
+ "common_sha256": "23599c7dc2bade09c3e0f6a613a4a63670adab6d1d1e8468ef175c89bd6e2ebf"
145
+ }