Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261013T034842Z-expanded-131-slide-master/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/expanded_master_20261013/disease/strict_snapshot_tables/scores/ye2026_sepsis/disease/draw4/extras/ye2026_sepsis/strict/en.csv

@@ -0,0 +1,25 @@
+dataset,design,unit,set,cellset,distance,n_samples,n_cells_real,n_cells_gen,n_pcs,lb,ub,dif_mean,en,lb_exact,lb_queries,n_representative_rows,en_reps_at_lb,seconds
+ye2026_sepsis,scored,strict,real_R2,pc,sq,77,11550,11550,100,155.309314585819,309.34167017639265,186.43425339020268,0.2020675375965518,True,"[11550, 11550]",,,9.5
+ye2026_sepsis,scored,strict,real_R2,pc,l2,77,11550,11550,100,12.17825085937637,16.88668985218123,13.202996343284623,0.21764017447697728,True,"[11550, 11550]",,,9.5
+ye2026_sepsis,scored,strict,real_R2,all,sq,77,272286,272329,100,124.55660746880048,213.75424429732934,133.2798657661566,0.09779696646140393,False,"[20000, 20000]",,,70.2
+ye2026_sepsis,scored,strict,real_R2,all,l2,77,272286,272329,100,10.929112839667921,14.233331951288877,11.27410919247648,0.10441085810417516,False,"[20000, 20000]",,,70.2
+ye2026_sepsis,scored,strict,lora,pc,sq,77,11550,11550,100,191.79358443771196,295.9816052013052,316.4836146201315,1.1967789508675495,True,"[11550, 11550]",,,9.6
+ye2026_sepsis,scored,strict,lora,pc,l2,77,11550,11550,100,13.508508358795513,16.53444541493591,17.34782474787488,1.268802462790301,True,"[11550, 11550]",,,9.6
+ye2026_sepsis,scored,strict,lora,all,sq,77,544615,115500,100,133.82597043502926,201.55340481100023,235.7398921924189,1.5047657230250506,False,"[20000, 20000]",,,78.4
+ye2026_sepsis,scored,strict,lora,all,l2,77,544615,115500,100,11.304897453581638,13.87273502750768,15.046911931979196,1.4572629189611406,False,"[20000, 20000]",,,78.4
+ye2026_sepsis,scored,strict,pairedcal,pc,sq,77,11550,11550,100,172.0319851760944,296.757149841803,339.5099768693898,1.3427762724721504,True,"[11550, 11550]",,,9.6
+ye2026_sepsis,scored,strict,pairedcal,pc,l2,77,11550,11550,100,12.816338729929992,16.553949519900375,18.00875194204761,1.3892332572591817,True,"[11550, 11550]",,,9.6
+ye2026_sepsis,scored,strict,pairedcal,all,sq,77,544615,115500,100,127.85211842144793,201.4125262850479,271.95709196393733,1.959001828941695,False,"[20000, 20000]",,,81.4
+ye2026_sepsis,scored,strict,pairedcal,all,l2,77,544615,115500,100,11.070725856842664,13.869411506955537,16.19147962564873,1.8296995121976423,False,"[20000, 20000]",,,81.4
+ye2026_sepsis,scored,strict,scsemi,pc,sq,77,11550,11550,100,123.01623195849523,293.46880328012674,492.68237522528904,2.1687331578545734,True,"[11550, 11550]",,,8.9
+ye2026_sepsis,scored,strict,scsemi,pc,l2,77,11550,11550,100,10.678957674718227,16.373833008216558,21.833479100745556,1.95869457587848,True,"[11550, 11550]",,,8.9
+ye2026_sepsis,scored,strict,scsemi,all,sq,77,544615,115500,100,110.62785824438978,198.719644245738,442.41299609665293,3.766357261131988,False,"[20000, 20000]",,,73.7
+ye2026_sepsis,scored,strict,scsemi,all,l2,77,544615,115500,100,10.186981674324539,13.74730015861621,20.67155827244046,2.9448423348569728,False,"[20000, 20000]",,,73.7
+ye2026_sepsis,scored,strict,raw,pc,sq,77,11550,11550,100,240.47468221213174,268.59927620559824,635.097699463854,14.031243165444288,True,"[11550, 11550]",,,9.6
+ye2026_sepsis,scored,strict,raw,pc,l2,77,11550,11550,100,14.817779978948396,15.675121035254065,24.645023150139558,11.462466539905721,True,"[11550, 11550]",,,9.6
+ye2026_sepsis,scored,strict,raw,all,sq,77,544615,115500,100,141.06978641803073,197.17869202367729,444.5807326641466,5.409318591585073,False,"[20000, 20000]",,,78.4
+ye2026_sepsis,scored,strict,raw,all,l2,77,544615,115500,100,11.530008698349798,13.713300249169611,20.824239324414112,4.256980989357277,False,"[20000, 20000]",,,78.4
+ye2026_sepsis,scored,strict,refcal,pc,sq,77,11550,11550,100,176.39548423471942,293.7642071586965,391.89125902915595,1.836057932861884,True,"[11550, 11550]",,,9.2
+ye2026_sepsis,scored,strict,refcal,pc,l2,77,11550,11550,100,12.983379056153156,16.451818251118237,19.42310215477368,1.8566631088613788,True,"[11550, 11550]",,,9.2
+ye2026_sepsis,scored,strict,refcal,all,sq,77,544615,115500,100,128.11548587802474,200.91675629604484,318.1213274134776,2.609924805493803,False,"[20000, 20000]",,,74.3
+ye2026_sepsis,scored,strict,refcal,all,l2,77,544615,115500,100,11.08277034277043,13.845700259512395,17.549700812730283,2.340606046781538,False,"[20000, 20000]",,,74.3

paper-releases/pbisc-diffusion/updates/20261013T034842Z-expanded-131-slide-master/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/expanded_master_20261013/disease/strict_snapshot_tables/scores/ye2026_sepsis/disease/draw4/extras/ye2026_sepsis/strict/metrics.csv

@@ -0,0 +1,25 @@
+dataset,design,unit,label,set,real_side,mode,n_real,n_gen,precision_k3,coverage_k3,density_k3,expected_coverage_identical_k3,precision_k5,coverage_k5,density_k5,expected_coverage_identical_k5,precision_k10,coverage_k10,density_k10,expected_coverage_identical_k10,c2st_knn_auc,c2st_knn_auc_sd,c2st_rf_auc,c2st_rf_auc_sd,nn1_acc,nn1_acc_real,nn1_acc_gen,mmd2_bw0.5,mmd2_bw1,mmd2_bw2,mmd2_sum,mmd_bandwidth_m,seconds
+ye2026_sepsis,scored,strict,Real vs real control (held-out real cells),real_R2,R1,raw,11550,11550,0.8730735930735931,0.9232900432900433,1.343896103896104,0.8750324682351671,0.9374891774891775,0.9863203463203464,1.3265454545454545,0.9687702904505108,0.9806926406926407,0.9997402597402597,1.3077229437229438,0.9990257609379009,0.515187777590375,0.0053962735531301815,0.5946101085062123,0.003119260231140606,0.5060606060606061,0.41783549783549784,0.5942857142857143,0.00010640162574421241,1.4265804671564908e-05,-4.2571677076885805e-06,0.00011641026270808874,27.82667328158684,40.2
+ye2026_sepsis,scored,strict,Real vs real control (held-out real cells),real_R2,R1,dm,11550,11550,0.8677056277056278,0.9256277056277056,1.3341991341991342,0.8750324682351671,0.9348051948051948,0.9862337662337662,1.3143030303030303,0.9687702904505108,0.9794805194805195,0.9998268398268398,1.302865800865801,0.9990257609379009,0.5090376492194675,0.007559064453103984,0.595297989168119,0.003571870861446085,0.5036796536796537,0.4162770562770563,0.5910822510822511,0.00010460450032334645,1.4164742226263627e-05,-4.969612207306184e-06,0.00011379963034230389,27.82667328158684,40.0
+ye2026_sepsis,scored,strict,Real vs real control (out-of-sample: R2 vs R3),real_R3,R2,raw,11550,11550,,,,,,,,,,,,,0.49975047319203164,0.0039381828111575475,0.49281679503757425,0.01120715597306584,0.5017748917748918,0.49705627705627703,0.5064935064935064,-6.30326922835267e-05,-3.9835239048269244e-05,-1.3536960939752873e-05,-0.00011640489227154882,27.82667328158684,35.0
+ye2026_sepsis,scored,strict,Real vs real control (out-of-sample: R2 vs R3),real_R3,R2,dm,11550,11550,,,,,,,,,,,,,0.49734744476302917,0.0054872638297803755,0.4934464871347988,0.009973369630694362,0.4976190476190476,0.489004329004329,0.5062337662337663,-6.680888699639453e-05,-4.1288141783724086e-05,-1.3720039674591789e-05,-0.00012181706845471041,27.82667328158684,35.6
+ye2026_sepsis,scored,strict,,lora,R1,raw,11550,11550,0.6076190476190476,0.4070995670995671,0.5674747474747476,0.8750324682351671,0.73991341991342,0.5284848484848484,0.596121212121212,0.9687702904505108,0.8816450216450217,0.6935064935064935,0.6371515151515151,0.9990257609379009,0.9340252618953917,0.0031258062556902807,0.9378812053747119,0.0021352397087890927,0.8355411255411256,0.8025108225108225,0.8685714285714285,0.021994126769488753,0.013066433542673339,0.004007952463682907,0.039068512775845,27.82667328158684,27.1
+ye2026_sepsis,scored,strict,,lora,R1,dm,11550,11550,0.6595670995670996,0.596017316017316,0.878903318903319,0.8750324682351671,0.7721212121212121,0.7270995670995671,0.8884155844155843,0.9687702904505108,0.8900432900432901,0.8696103896103896,0.9176883116883117,0.9990257609379009,0.8693149303798655,0.0016392891970060382,0.902240194149285,0.0016535688895024266,0.7574891774891774,0.6932467532467532,0.8217316017316018,0.011638778472814582,0.006942364837122739,0.0023098522313107495,0.02089099554124807,27.82667328158684,27.1
+ye2026_sepsis,scored,strict,,lora,R2,raw,11550,11550,,,,,,,,,,,,,0.9326399430295534,0.003541481415941684,0.9339607953374187,0.0025454092060646274,0.8319047619047619,0.841038961038961,0.8227705627705628,0.020550639113874725,0.0125691959976717,0.003967166269597255,0.03708700138114368,27.82667328158684,24.7
+ye2026_sepsis,scored,strict,,lora,R2,dm,11550,11550,,,,,,,,,,,,,0.8694859916418359,0.005152567332361731,0.8971387342815914,0.0032663133545406224,0.766017316017316,0.7317748917748917,0.8002597402597402,0.010873940758546696,0.0065734884435291185,0.0022034003865052387,0.019650829588581054,27.82667328158684,24.9
+ye2026_sepsis,scored,strict,,pairedcal,R1,raw,11550,11550,0.6006926406926407,0.22796536796536795,0.4567388167388167,0.8750324682351671,0.7466666666666667,0.3077056277056277,0.48133333333333334,0.9687702904505108,0.8936796536796536,0.4442424242424242,0.5188398268398269,0.9990257609379009,0.9822484398718165,0.0016334333935210622,0.9862797548771575,0.0009493431851630746,0.9335497835497836,0.898961038961039,0.9681385281385282,0.05850979724207184,0.031364084116339175,0.00949309247786001,0.09936697383627102,27.82667328158684,28.0
+ye2026_sepsis,scored,strict,,pairedcal,R1,dm,11550,11550,0.6661471861471862,0.41255411255411256,0.7236075036075036,0.8750324682351671,0.7894372294372294,0.5293506493506493,0.7644675324675324,0.9687702904505108,0.9125541125541126,0.6888311688311688,0.8171428571428571,0.9990257609379009,0.9588930867112687,0.0029519905697361405,0.9697830625363093,0.0030104718472908423,0.8758008658008658,0.804069264069264,0.9475324675324676,0.04003819323409086,0.02323029949922839,0.007803664292888923,0.07107215702620817,27.82667328158684,28.2
+ye2026_sepsis,scored,strict,,pairedcal,R2,raw,11550,11550,,,,,,,,,,,,,0.9837705627705627,0.0013156855824325731,0.9870458199808849,0.0004612613890120951,0.9367099567099567,0.9196536796536796,0.9537662337662338,0.05670647946785967,0.0307392272691287,0.0094194933543148,0.09686520009130317,27.82667328158684,25.7
+ye2026_sepsis,scored,strict,,pairedcal,R2,dm,11550,11550,,,,,,,,,,,,,0.9572665804613857,0.0023509537770567937,0.9713581454620416,0.0008854347585239823,0.8803030303030303,0.824935064935065,0.9356709956709957,0.039337486553679746,0.022860883877286353,0.007678759782296707,0.0698771302132628,27.82667328158684,26.0
+ye2026_sepsis,scored,strict,,scsemi,R1,raw,11550,11550,0.34476190476190477,0.040952380952380955,0.16473304473304473,0.8750324682351671,0.48008658008658006,0.05818181818181818,0.168987012987013,0.9687702904505108,0.6630303030303031,0.08190476190476191,0.17412987012987013,0.9990257609379009,0.9974277281160399,0.00045101111921805825,0.999547965742771,0.00010041247305350361,0.9897402597402597,0.9825108225108226,0.996969696969697,0.22126828842559987,0.14917393829184467,0.05019613477616813,0.42063836149361267,27.82667328158684,27.2
+ye2026_sepsis,scored,strict,,scsemi,R1,dm,11550,11550,0.1825974025974026,0.07056277056277056,0.09696969696969697,0.8750324682351671,0.2788744588744589,0.10034632034632035,0.10941991341991342,0.9687702904505108,0.42363636363636364,0.1618181818181818,0.12026839826839826,0.9990257609379009,0.9960614306328592,0.0007195277891846192,0.9990052660182531,9.657557099092804e-05,0.9831168831168832,0.9722077922077922,0.994025974025974,0.14794139527478356,0.09230684941099732,0.0307395701276707,0.2709878148134516,27.82667328158684,28.3
+ye2026_sepsis,scored,strict,,scsemi,R2,raw,11550,11550,,,,,,,,,,,,,0.9978664005547122,0.0008131033643608319,0.9995807799703904,4.964463010272483e-05,0.9913419913419913,0.987012987012987,0.9956709956709957,0.22359418912402768,0.15000393854340976,0.05047563662540866,0.4240737642928461,27.82667328158684,24.6
+ye2026_sepsis,scored,strict,,scsemi,R2,dm,11550,11550,,,,,,,,,,,,,0.9959457468937989,0.0007524422320075618,0.9989569910608871,0.00018686629557198846,0.9821645021645021,0.970995670995671,0.9933333333333333,0.14833916254942847,0.09182010488884118,0.03041402340190924,0.2705732908401789,27.82667328158684,26.5
+ye2026_sepsis,scored,strict,,raw,R1,raw,11550,11550,0.3141125541125541,0.03532467532467533,0.17821067821067824,0.8750324682351671,0.4380952380952381,0.0477056277056277,0.19717748917748917,0.9687702904505108,0.6367099567099567,0.07515151515151515,0.23293506493506494,0.9990257609379009,0.9971267967241992,0.0006559320728034894,0.9990913588575927,0.0001160531256186646,0.9893073593073594,0.9844155844155844,0.9941991341991342,0.15101842979972896,0.18748962632284716,0.07897149424490091,0.417479550367477,27.82667328158684,27.0
+ye2026_sepsis,scored,strict,,raw,R1,dm,11550,11550,0.29714285714285715,0.03316017316017316,0.16730158730158728,0.8750324682351671,0.3974025974025974,0.04632034632034632,0.16941991341991341,0.9687702904505108,0.5984415584415584,0.07090909090909091,0.19512554112554112,0.9990257609379009,0.9974422518318622,0.0006078399264568216,0.9989353085586853,0.00019688517306939594,0.9882683982683983,0.9843290043290043,0.9922077922077922,0.1574803392964238,0.18961389683956675,0.07860586405691272,0.4257001001929033,27.82667328158684,26.7
+ye2026_sepsis,scored,strict,,raw,R2,raw,11550,11550,,,,,,,,,,,,,0.9975036262438861,0.000701983849063399,0.9990022863139746,0.0003088866748755433,0.9893939393939394,0.9877056277056278,0.9910822510822511,0.1569605391554304,0.18992433092409722,0.07947025145832898,0.4263551215378566,27.82667328158684,25.0
+ye2026_sepsis,scored,strict,,raw,R2,dm,11550,11550,,,,,,,,,,,,,0.9977432956653735,0.0006695563519800253,0.9988825359344841,0.0003748928387841644,0.9885714285714285,0.9875324675324675,0.9896103896103896,0.1629647997514442,0.19203428919942633,0.07914094703186447,0.434140035982735,27.82667328158684,24.7
+ye2026_sepsis,scored,strict,,refcal,R1,raw,11550,11550,0.48424242424242425,0.09246753246753246,0.2888023088023088,0.8750324682351671,0.64995670995671,0.12632034632034633,0.3091082251082251,0.9687702904505108,0.8290909090909091,0.1870995670995671,0.32171428571428573,0.9990257609379009,0.992598039766871,0.0013881239283653599,0.9962621015348289,0.0004676653513482647,0.970995670995671,0.9557575757575758,0.9862337662337662,0.13615139462249798,0.08140651695410961,0.02576711206616955,0.24332502364277714,27.82667328158684,27.6
+ye2026_sepsis,scored,strict,,refcal,R1,dm,11550,11550,0.47385281385281386,0.19593073593073593,0.3295815295815296,0.8750324682351671,0.6204329004329004,0.26251082251082253,0.35077056277056273,0.9687702904505108,0.8045021645021645,0.37974025974025977,0.38337662337662337,0.9990257609379009,0.986466145686925,0.0009737984432641704,0.9906763366503626,0.0005281950440243859,0.9380952380952381,0.911082251082251,0.9651082251082251,0.10032301052734965,0.06047851381230096,0.019881831826855434,0.18068335616650605,27.82667328158684,26.8
+ye2026_sepsis,scored,strict,,refcal,R2,raw,11550,11550,,,,,,,,,,,,,0.9945259646558346,0.00034267419751614255,0.9966136691591236,0.0005704584618727074,0.9741991341991342,0.9672727272727273,0.9811255411255412,0.13636172303171495,0.08156778728470937,0.025923206386254893,0.24385271670267922,27.82667328158684,25.3
+ye2026_sepsis,scored,strict,,refcal,R2,dm,11550,11550,,,,,,,,,,,,,0.9870176158617717,0.0011769802687448616,0.9908014654897773,0.00035576315842635167,0.9409090909090909,0.9207792207792208,0.961038961038961,0.10099707549300219,0.06076061873742877,0.019944492900335842,0.1817021871307668,27.82667328158684,25.0

paper-releases/pbisc-diffusion/updates/20261013T034842Z-expanded-131-slide-master/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/expanded_master_20261013/disease/strict_snapshot_tables/scores/ye2026_sepsis/disease/draw4/statistics/donor_deg/donor_deg_summary.csv

@@ -0,0 +1,26 @@
+arm,celltype,status,observed_status,generated_status,n_case_donors_observed,n_control_donors_observed,n_case_donors_generated,n_control_donors_generated,method_observed,method_generated,reason_observed,reason_generated,reason_fit,reason_population,top50_overlap_count,observed_top50_size,generated_top50_size
+lora,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50
+lora,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50
+lora,Monocyte,ok,ok,ok,57,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50
+lora,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,21
+lora,DC,ok,ok,ok,53,20,50,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50
+pairedcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50
+pairedcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,1
+pairedcal,Monocyte,ok,ok,ok,57,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50
+pairedcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,32
+pairedcal,DC,ok,ok,ok,53,20,54,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0
+scsemi,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50
+scsemi,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,17
+scsemi,Monocyte,ok,ok,ok,57,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50
+scsemi,NK cell,ok,ok,ok,57,20,52,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,12
+scsemi,DC,ok,ok,ok,53,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50
+raw,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50
+raw,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50
+raw,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50
+raw,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50
+raw,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0
+refcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50
+refcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0
+refcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50
+refcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50
+refcal,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,19

paper-releases/pbisc-diffusion/updates/20261013T034842Z-expanded-131-slide-master/diffusion/dataset/server_1/model8/presentations/2026-09-30--paper-summary--r00/data/expanded_master_20261013/disease/strict_ye2026_sepsis_deg.csv

@@ -0,0 +1,126 @@
+arm,celltype,status,observed_status,generated_status,n_case_donors_observed,n_control_donors_observed,n_case_donors_generated,n_control_donors_generated,method_observed,method_generated,reason_observed,reason_generated,reason_fit,reason_population,top50_overlap_count,observed_top50_size,generated_top50_size,draw
+lora,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,7,50,50,0
+lora,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,7,50,50,0
+lora,Monocyte,ok,ok,ok,57,20,53,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,0
+lora,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,0
+lora,DC,ok,ok,ok,54,20,34,16,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,0
+pairedcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,0
+pairedcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,28,0
+pairedcal,Monocyte,ok,ok,ok,57,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,18,0
+pairedcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,26,0
+pairedcal,DC,ok,ok,ok,54,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,0
+scsemi,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,0
+scsemi,B cell,ok,ok,ok,57,20,52,19,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,0
+scsemi,Monocyte,ok,ok,ok,57,20,47,19,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,2,0
+scsemi,NK cell,ok,ok,ok,57,20,42,15,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,0
+scsemi,DC,ok,ok,ok,54,20,51,17,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,0
+raw,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,0
+raw,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,21,0
+raw,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,0
+raw,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,0
+raw,DC,ok,ok,ok,54,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,0
+refcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,0
+refcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,0
+refcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,0
+refcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,0
+refcal,DC,ok,ok,ok,54,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,15,0
+lora,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,1
+lora,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,23,1
+lora,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,7,50,50,1
+lora,NK cell,ok,ok,ok,57,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,1
+lora,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,1
+pairedcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,1
+pairedcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,1
+pairedcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,12,50,50,1
+pairedcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,1
+pairedcal,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,46,1
+scsemi,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,1
+scsemi,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,47,1
+scsemi,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,1
+scsemi,NK cell,ok,ok,ok,57,20,55,17,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,1
+scsemi,DC,ok,ok,ok,53,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,1
+raw,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,1
+raw,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,1
+raw,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,1
+raw,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,1
+raw,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,1
+refcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,1
+refcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,1
+refcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,1
+refcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,1
+refcal,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,33,1
+lora,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,10,50,50,2
+lora,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50,2
+lora,Monocyte,ok,ok,ok,57,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,26,2
+lora,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,2
+lora,DC,ok,ok,ok,53,20,35,19,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,2
+pairedcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,2
+pairedcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,2
+pairedcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50,2
+pairedcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,18,2
+pairedcal,DC,ok,ok,ok,53,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,2
+scsemi,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,13,2
+scsemi,B cell,ok,ok,ok,57,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,2
+scsemi,Monocyte,ok,ok,ok,57,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,37,2
+scsemi,NK cell,ok,ok,ok,57,20,47,17,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,2
+scsemi,DC,ok,ok,ok,53,20,55,18,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,2
+raw,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,2
+raw,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,2
+raw,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,2
+raw,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,2
+raw,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,2
+refcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,2
+refcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,2
+refcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,2
+refcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,2
+refcal,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,33,2
+lora,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,4,50,50,3
+lora,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,9,3
+lora,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,45,3
+lora,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,3
+lora,DC,ok,ok,ok,53,20,53,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,3
+pairedcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,3
+pairedcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,3
+pairedcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50,3
+pairedcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,32,3
+pairedcal,DC,ok,ok,ok,53,20,54,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,3,3
+scsemi,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,3
+scsemi,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,3
+scsemi,Monocyte,ok,ok,ok,57,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,3
+scsemi,NK cell,ok,ok,ok,57,20,56,19,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,7,50,50,3
+scsemi,DC,ok,ok,ok,53,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,3
+raw,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,3
+raw,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,27,3
+raw,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50,3
+raw,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,3
+raw,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,3
+refcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,3
+refcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,3
+refcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,3
+refcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,3
+refcal,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,21,3
+lora,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,4
+lora,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50,4
+lora,Monocyte,ok,ok,ok,57,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,4
+lora,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,21,4
+lora,DC,ok,ok,ok,53,20,50,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,4
+pairedcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,4
+pairedcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,1,4
+pairedcal,Monocyte,ok,ok,ok,57,20,56,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,4
+pairedcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,32,4
+pairedcal,DC,ok,ok,ok,53,20,54,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,4
+scsemi,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,50,4
+scsemi,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,1,50,17,4
+scsemi,Monocyte,ok,ok,ok,57,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,6,50,50,4
+scsemi,NK cell,ok,ok,ok,57,20,52,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,12,4
+scsemi,DC,ok,ok,ok,53,20,55,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,4
+raw,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,4
+raw,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,50,4
+raw,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,4
+raw,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,4
+raw,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,4
+refcal,T cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,2,50,50,4
+refcal,B cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,0,4
+refcal,Monocyte,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,5,50,50,4
+refcal,NK cell,ok,ok,ok,57,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,3,50,50,4
+refcal,DC,ok,ok,ok,53,20,57,20,edgeR_TMM_limma_voom,edgeR_TMM_limma_voom,,,,,0,50,19,4