Publish verified PBISC dataset README.md
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README.md
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---
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language:
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- en
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size_categories:
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- 10M<n<100M
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tags:
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- single-cell-rna-seq
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- bulk-rna-seq
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- diffusion
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configs:
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- config_name: shard_catalog
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default: true
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data_files:
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- split: catalog
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path: index/metadata/source_shards.parquet
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---
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# PBISC Diffusion training data
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Private archival/reproduction release for PBISC Diffusion. The catalog preview
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lists shards; it is not the expression matrix or a train/test example split.
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Expression remains unchanged sparse CSR Zarr (base v3, overlay v2) in transport
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archives. Use the PBISC code package to verify and restore assets.
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The release has 41,395,184 logical cells, 22 source datasets, 432 shards and
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20,097 ordered genes. It includes row-aligned cell metadata, measurement masks,
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donor splits, sealed E2 recipes, All-K top-ups and the train-fitted conditioner.
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Canonical counts are shared across model panels. Measured zero and unmeasured
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coordinates remain distinct. Source assay units and sparse values are preserved.
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`release.json` is the complete asset/hash manifest. `relocation.json` binds new
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paths while retaining original source/index fingerprints. Original manifests
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are preserved rather than rewritten. No new random split is created.
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Public redistribution rights have not been established by this export.
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`provenance/rights.tsv` records each study as unverified. Private archival storage
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does not establish a blanket dataset license. No license is inferred from public
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accessibility of an upstream download. This dataset remains private pending a
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source-specific rights review.
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Code: https://github.com/junidude/PBISC
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Model: https://huggingface.co/junidude14/PBISC
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Verify and restore pinned assets with `pbisc data download` or `pbisc data restore`.
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These archives are not directly loaded as dense matrices by `load_dataset()`.
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Plan approximately 112 GB for transport plus a similar amount for full extraction;
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selected-shard restoration is supported. The current release is file/provenance
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packaging, not a new biological validation of the source datasets.
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