Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/ye2026_sepsis/fewshot_draw2_cibersortx/per_donor.csv

@@ -0,0 +1,78 @@
+donor,group,bp_comp_l1_final_cells,bp_comp_l1_first_cells,bp_comp_l1_final_mrna,bp_comp_l1_first_mrna,lora_comp_l1,bp_first_T cell,bp_final_T cell,obs_T cell,bp_first_B cell,bp_final_B cell,obs_B cell,bp_first_Monocyte,bp_final_Monocyte,obs_Monocyte,bp_first_NK cell,bp_final_NK cell,obs_NK cell,bp_first_DC,bp_final_DC,obs_DC,bp_first_Other,bp_final_Other,obs_Other
+Abd-PS04,ped_sepsis,0.3830679338782535,0.3830679338782535,0.5451675966685239,0.5451675966685239,0.7664055790053219,0.046012741668718146,0.046012741668718146,0.14094329234721967,0.07370306199226535,0.07370306199226535,0.17030647825289044,0.6000570566025175,0.6000570566025175,0.5608368507983116,0.0647810839076825,0.0647810839076825,0.02147182969352175,0.07251850552253622,0.07251850552253622,0.003853918150119288,0.1429275503062805,0.1429275503062805,0.10258763075793724
+Abd-PS05,ped_sepsis,0.750118484688775,0.750118484688775,0.6710930526163111,0.6710930526163111,0.7162588099364529,0.1592666903354977,0.1592666903354977,0.30387059503177355,0.28456488187817364,0.28456488187817364,0.5060658578856152,0.13960545952295716,0.13960545952295716,0.07019064124783363,0.09030895543043782,0.09030895543043782,0.0891103408434431,0.0,0.0,0.008954361640670132,0.32625401283293354,0.32625401283293354,0.021808203350664357
+Abd-PS07,ped_sepsis,0.8795932281705332,0.8795932281705332,0.8650010157129687,0.8650010157129687,0.2247327188940092,0.4431573369636569,0.4431573369636569,0.8626152073732719,0.010589613566650984,0.010589613566650984,0.023329493087557603,0.01063321647617562,0.01063321647617562,0.002304147465437788,0.4961479305349548,0.4961479305349548,0.09331797235023041,0.028925605322984115,0.028925605322984115,0.0002880184331797235,0.01054629713557757,0.01054629713557757,0.018145161290322582
+Abd-PS19,ped_sepsis,0.4247911870906958,0.4247911870906958,0.42105684996299664,0.42105684996299664,0.6552024048096192,0.37572720287939587,0.37572720287939587,0.4622995991983968,0.11912326755241347,0.11912326755241347,0.11209919839679358,0.1678892276233524,0.1678892276233524,0.2937124248496994,0.16012830817378745,0.16012830817378745,0.05586172344689379,0.06771177219413316,0.06771177219413316,0.0156563126252505,0.10942022157691761,0.10942022157691761,0.06037074148296593
+Abd-PS20,ped_sepsis,0.233873181443865,0.233873181443865,0.2338731814438649,0.2338731814438649,0.1931287400494098,0.3702004214714881,0.3702004214714881,0.30496843261048584,0.629799578528512,0.629799578528512,0.5780949766675817,0.0,0.0,0.08770244304144935,0.0,0.0,0.007823222618720834,0.0,0.0,0.0005489980785067252,0.0,0.0,0.02086192698325556
+Abd-PS23,ped_sepsis,0.6946415586127771,0.6946415586127771,0.487462283650797,0.487462283650797,1.0807488202986,0.2502674330922361,0.2502674330922361,0.2529589231840334,0.2215806126949256,0.2215806126949256,0.3272220932931075,0.09723006572320785,0.09723006572320785,0.32142028312833604,0.0007512600303062566,0.0007512600303062566,0.013460199582269667,0.0,0.0,0.002088651659317707,0.43017062845932436,0.43017062845932436,0.08284984915293572
+Abd-PS27,ped_sepsis,0.5357212042516668,0.5357212042516668,0.5610115150481103,0.5610115150481103,0.5955499451928856,0.8491822170860513,0.8491822170860513,0.6126021003500584,0.0,0.0,0.06078285774901877,0.05471732424315168,0.05471732424315168,0.13196138750397793,0.0,0.0,0.010289593720165482,0.03425067739153763,0.03425067739153763,0.0029701920016972526,0.06184978127925927,0.06184978127925927,0.1813938686750822
+Abd-S102,adult_sepsis,1.3709057769133504,1.3709057769133504,1.3674373719356265,1.3674373719356265,0.6030367255396691,0.12902261172439614,0.12902261172439614,0.47981497056349875,0.10551866007525773,0.10551866007525773,0.39318755256518084,0.3296860147527194,0.3296860147527194,0.0053616484440706475,0.04962316522727065,0.04962316522727065,0.095878889823381,0.0,0.0,0.0007359125315391085,0.386149548220356,0.386149548220356,0.02502102607232969
+Abd-S103,adult_sepsis,0.5708502433160103,0.5708502433160103,0.4527698536227834,0.4527698536227834,0.7122563939297464,0.34498834510618126,0.34498834510618126,0.4813753581661891,0.0,0.0,0.14782977820227103,0.09440764074213402,0.09440764074213402,0.0024408362517245037,0.04272672213531471,0.04272672213531471,0.04393505253104107,0.01977191038963428,0.01977191038963428,0.00021224663058473945,0.4981053816267356,0.4981053816267356,0.3242067282181895
+Abd-S120,adult_sepsis,0.29969204912958247,0.29969204912958247,0.272098115570013,0.272098115570013,0.7438971698656983,0.237529009360325,0.237529009360325,0.3140238630468615,0.10420773077656352,0.10420773077656352,0.11049628220646723,0.3982667943507152,0.3982667943507152,0.46446481065191075,0.19775463133841012,0.19775463133841012,0.07297250561992046,0.0,0.0,0.0008646031471554556,0.06224183417398622,0.06224183417398622,0.03717793532768459
+Abd-S123,adult_sepsis,0.3463224245294171,0.3463224245294171,0.28050720821536124,0.28050720821536124,1.36734677462031,0.10060868757699434,0.10060868757699434,0.16986823305286552,0.08932399411720687,0.08932399411720687,0.08779171297031275,0.39887655197604593,0.39887655197604593,0.5027782187648833,0.2247579971308706,0.2247579971308706,0.10938244165740593,0.014461754480704274,0.014461754480704274,0.0007937767899666614,0.17197101471817794,0.17197101471817794,0.1293856167645658
+Abd-S156,adult_sepsis,0.34152952207723714,0.34152952207723714,0.43774749718663447,0.43774749718663447,0.6531612411955073,0.21078673161021083,0.21078673161021083,0.3343803540833809,0.03492480660873774,0.03492480660873774,0.08209594517418618,0.43418290289624994,0.43418290289624994,0.39406053683609366,0.1237473275767592,0.1237473275767592,0.0910908052541405,0.021572209216297714,0.021572209216297714,0.0012849800114220445,0.17478602209174463,0.17478602209174463,0.0970873786407767
+Abd-S39,adult_sepsis,0.4912546624186529,0.4912546624186529,0.20201592728913187,0.20201592728913187,1.3953639400295192,0.17307514904149907,0.17307514904149907,0.13819622465625728,0.04748781839147438,0.04748781839147438,0.06152412025168958,0.4631188284928836,0.4631188284928836,0.6933115823817292,0.1169426858988431,0.1169426858988431,0.049638778839431366,0.0,0.0,0.0013982754602656724,0.19937551817529986,0.19937551817529986,0.05593101841062689
+Abd-S42,adult_sepsis,0.6304620533511963,0.6304620533511963,0.7677178272870144,0.7677178272870144,0.1155809349779199,0.33158595067246416,0.33158595067246416,0.5748439165524593,0.038324789013590536,0.038324789013590536,0.09760925841327851,0.2230249053860615,0.2230249053860615,0.17039744175422566,0.2911701419786905,0.2911701419786905,0.05862646566164154,0.031734928602760365,0.031734928602760365,0.0016750418760469012,0.08415928434643302,0.08415928434643302,0.0968478757423481
+Abd-S47,adult_sepsis,0.13106431177944927,0.13106431177944927,0.13437194742661682,0.13437194742661682,0.1404129971145402,0.7421358571765947,0.7421358571765947,0.7027976414502571,0.22482376365707618,0.22482376365707618,0.20474219044034625,0.014234520826810445,0.014234520826810445,0.03224187680341237,0.00977053442407456,0.00977053442407456,0.019069125580228326,0.00673964081442776,0.00673964081442776,0.0006272738677706687,0.002295683101016174,0.002295683101016174,0.040521891857985194
+Abd-S51,adult_sepsis,0.5086009504167208,0.5086009504167208,0.46597068856770274,0.46597068856770274,0.4022083029861617,0.14607523207009349,0.14607523207009349,0.25273124544792425,0.297046284558163,0.297046284558163,0.269482884195193,0.20749027961156802,0.20749027961156802,0.3551347414420976,0.10018385049204234,0.10018385049204234,0.03670793882010197,0.08359312024620381,0.08359312024620381,0.0014566642388929353,0.1656112330219294,0.1656112330219294,0.08448652585579024
+Abd-S54,adult_sepsis,0.6794368549610028,0.6794368549610028,0.6776555458658646,0.6776555458658646,0.4544732668201586,0.14569983806055775,0.14569983806055775,0.4854182655410591,0.1524120910063153,0.1524120910063153,0.1364799181376311,0.14899524014276916,0.14899524014276916,0.012918905090816066,0.4371644941553554,0.4371644941553554,0.340752110514198,0.030781672813092364,0.030781672813092364,0.0011511895625479663,0.08494666382191002,0.08494666382191002,0.023279611153747763
+Abd-S57,adult_sepsis,1.0490739226951795,1.0490739226951795,1.1059984602679693,1.1059984602679693,0.3499777482331537,0.326768055796067,0.326768055796067,0.8422783570079071,0.0,0.0,0.009026660135749773,0.2612062743206246,0.2612062743206246,0.016164019312854244,0.17386044891537586,0.17386044891537586,0.10671051710866979,0.06628762694741756,0.06628762694741756,0.0012595339724302008,0.1718775940205149,0.1718775940205149,0.024560912462388916
+Abd-S66,adult_sepsis,1.0064953602391373,1.0064953602391373,1.104188801719814,1.104188801719814,0.5198174343485191,0.10377739718715594,0.10377739718715594,0.49295242889504154,0.12504137122083653,0.12504137122083653,0.23873647118046817,0.43112102405649644,0.43112102405649644,0.03788069468915178,0.2740648467856647,0.2740648467856647,0.18688648376541656,0.0,0.0,0.0003775484520513466,0.06599536074984635,0.06599536074984635,0.04316637301787063
+Abd-S79,adult_sepsis,0.7962941219772369,0.7962941219772369,0.9766508549869614,0.9766508549869614,0.3639874026189292,0.32489024513662806,0.32489024513662806,0.5500994530084535,0.1474801944577164,0.1474801944577164,0.30892590750870214,0.3605968341028718,0.3605968341028718,0.024365987071108902,0.0822423204016218,0.0822423204016218,0.09373446046742914,0.02428004646120308,0.02428004646120308,0.00012431626056688214,0.060510359439958764,0.060510359439958764,0.022749875683739432
+Abd-S83,adult_sepsis,1.564034434578373,1.564034434578373,1.583756669900834,1.583756669900834,0.6932227411821548,0.031305035093495324,0.031305035093495324,0.3924947656627476,0.0,0.0,0.16991464003865356,0.4536132371357636,0.4536132371357636,0.049927524561120956,0.05042392252471064,0.05042392252471064,0.3013367692059913,0.04598148959380056,0.04598148959380056,0.0009663391850539539,0.41867631565222985,0.41867631565222985,0.0853599613464326
+Abd-S98,adult_sepsis,1.462854198296887,1.462854198296887,1.4900250076724728,1.4900250076724728,0.5073293413173653,0.12254025346741806,0.12254025346741806,0.7477045908183633,0.0034355810219049484,0.0034355810219049484,0.10958083832335329,0.51674604153149,0.51674604153149,0.019560878243512974,0.20696185386490598,0.20696185386490598,0.11037924151696607,0.0014793018911755406,0.0014793018911755406,0.0015968063872255488,0.14883696822310552,0.14883696822310552,0.011177644710578843
+HC01,adult_HC,0.5239450731247629,0.5239450731247629,0.6631758927031417,0.6631758927031417,0.160859136931092,0.4659787413238557,0.4659787413238557,0.5901897178806645,0.12876151672180838,0.12876151672180838,0.09938071365378945,0.05332338954528539,0.05332338954528539,0.1862774009633343,0.19353534731923908,0.19353534731923908,0.06772830040302762,0.13519321896780995,0.13519321896780995,0.028408532389658903,0.023207786122001462,0.023207786122001462,0.028015334709525212
+HC05,adult_HC,0.6981426563339875,0.6981426563339875,0.6781556063875365,0.6781556063875365,0.2237682468021068,0.4219156410505935,0.4219156410505935,0.6924604966139954,0.11584453996141611,0.11584453996141611,0.09498871331828443,0.017816642520561678,0.017816642520561678,0.08099322799097065,0.403943773498574,0.403943773498574,0.10455981941309254,0.04047940296885459,0.04047940296885459,0.01164785553047404,0.0,0.0,0.015349887133182845
+HC07,adult_HC,0.6639459154350713,0.6639459154350713,0.6391179765920137,0.6391179765920137,0.629579018888436,0.16683611107463664,0.16683611107463664,0.3848348960456584,0.062274072661537304,0.062274072661537304,0.03770892784345699,0.1308947846192079,0.1308947846192079,0.21962902568283735,0.5253380993137742,0.5253380993137742,0.3080921320831635,0.10942397367536726,0.10942397367536726,0.019262128006522626,0.005232958655476806,0.005232958655476806,0.03047289033836119
+HC09,adult_HC,0.6907560765791265,0.6907560765791265,0.7470064515893512,0.7470064515893512,0.2344963835503203,0.4722325619392676,0.4722325619392676,0.6319487497416821,0.018671153663201174,0.018671153663201174,0.06013639181649101,0.03765914298748843,0.03765914298748843,0.1529241578838603,0.38583529197818583,0.38583529197818583,0.11365984707584212,0.0856018494318569,0.0856018494318569,0.012399256044637322,0.0,0.0,0.028931597437487085
+HC12,adult_HC,0.5413340363298362,0.5413340363298362,0.5772754121811652,0.5772754121811652,0.4434193548387097,0.3743749532323455,0.3743749532323455,0.5456989247311828,0.06081374891073843,0.06081374891073843,0.05725806451612903,0.04689351247370414,0.04689351247370414,0.14623655913978495,0.4195169352074829,0.4195169352074829,0.2196236559139785,0.0740803126150916,0.0740803126150916,0.008870967741935484,0.02432053756063746,0.02432053756063746,0.022311827956989248
+HC13,adult_HC,0.5283197164006407,0.5283197164006407,0.502328357120973,0.502328357120973,0.4694069165595227,0.3758027978196393,0.3758027978196393,0.5676985461378696,0.11132000724314732,0.11132000724314732,0.0842646622490357,0.045650478975473446,0.045650478975473446,0.11433092671348037,0.4107560480016207,0.4107560480016207,0.20393630699238452,0.03839475142751358,0.03839475142751358,0.008109979230540996,0.018075916532605613,0.018075916532605613,0.021659578676688756
+HC16,adult_HC,0.8396333889265003,0.8396333889265003,0.8386555145753498,0.8386555145753498,0.6029179668538938,0.2416008928079644,0.2416008928079644,0.511441647597254,0.04015197781019087,0.04015197781019087,0.05325566881630955,0.0022200736502746613,0.0022200736502746613,0.1367796962762638,0.6598504443736378,0.6598504443736378,0.28073642604535054,0.05131220390696205,0.05131220390696205,0.010609527771999168,0.004864407450970272,0.004864407450970272,0.007177033492822967
+IC10,adult_ICU_ctrl,0.45528732853563303,0.45528732853563303,0.31306406187245417,0.31306406187245417,0.3106474769012082,0.4468196650677736,0.4468196650677736,0.5834221748400853,0.1049281277944671,0.1049281277944671,0.12526652452025586,0.09907336163326906,0.09907336163326906,0.16977611940298507,0.19693588141894824,0.19693588141894824,0.09461620469083155,0.009568673584758087,0.009568673584758087,0.003598081023454158,0.14267429050078395,0.14267429050078395,0.02332089552238806
+IC15,adult_ICU_ctrl,0.7012102116139665,0.7012102116139665,0.7658840627347752,0.7658840627347752,0.1922629686697483,0.43048586758789686,0.43048586758789686,0.5791602465331279,0.054156834931027145,0.054156834931027145,0.045839753466872114,0.1106143537642423,0.1106143537642423,0.278954802259887,0.30066287989080354,0.30066287989080354,0.04840780688238315,0.10049776900261538,0.10049776900261538,0.0104648176682075,0.0035822948234149,0.0035822948234149,0.03717257318952234
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paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/ye2026_sepsis/fewshot_draw2_cibersortx/summary.json

@@ -0,0 +1,157 @@
+{
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+ "comparison": "fewshot",
+ "draw": 2,
+ "gene_mode": "cibersortx",
+ "stored_scores": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores/ye2026_sepsis/fewshot_n5/draw2",
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+ "score_ft_sha256": "ec5f40b4cea6d5062d0138f3b934abb6465e34cbfeac869c8a0906924c033aec",
+ "seconds": 1.7
+}

paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/ye2026_sepsis/fewshot_draw2_full/contrast.csv

@@ -0,0 +1,17 @@
+genes,celltype,statistic,n_genes,r_generated,r_broadcast,partial_r_generated_given_broadcast,r_generated_vs_broadcast
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paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/results/ye2026_sepsis/fewshot_draw2_full/per_donor.csv

@@ -0,0 +1,78 @@
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