junidude14 commited on
Commit
838c8c2
·
verified ·
1 Parent(s): 8776c2a

Archive 4 checkpoints (1-4)

Browse files
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/imperial_eskd/fewshot0/SPLIT.json ADDED
@@ -0,0 +1,200 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "dataset": "imperial_eskd",
3
+ "kind": "fewshot",
4
+ "idx": 0,
5
+ "reference": [
6
+ "C58_1604",
7
+ "C58_2501",
8
+ "C58_2901",
9
+ "C58_0102",
10
+ "C58_0402",
11
+ "C58_1003",
12
+ "C106_2204",
13
+ "C126_2504",
14
+ "C126_3004",
15
+ "C126_0605",
16
+ "C141_2001",
17
+ "C141_2201",
18
+ "C141_3001",
19
+ "C141_0202",
20
+ "C237_2805"
21
+ ],
22
+ "mixture": [
23
+ "C20_1004",
24
+ "C20_1404",
25
+ "C21_1004",
26
+ "C21_1704",
27
+ "C21_2504",
28
+ "C23_2204",
29
+ "C31_1304",
30
+ "C31_2004",
31
+ "C31_2704",
32
+ "C33_1401",
33
+ "C33_1601",
34
+ "C33_1901",
35
+ "C34_1404",
36
+ "C34_2104",
37
+ "C34_2504",
38
+ "C36_1504",
39
+ "C36_1704",
40
+ "C36_2104",
41
+ "C40_1504",
42
+ "C40_2204",
43
+ "C40_0105",
44
+ "C42_1504",
45
+ "C42_2204",
46
+ "C42_2704",
47
+ "C60_2504",
48
+ "C63_1704",
49
+ "C63_2404",
50
+ "C63_2904",
51
+ "C65_1704",
52
+ "C65_2104",
53
+ "C65_2504",
54
+ "C69_1804",
55
+ "C82_2504",
56
+ "C85_2004",
57
+ "C93_2104",
58
+ "C93_2704",
59
+ "C93_0405",
60
+ "C101_0601",
61
+ "C101_1101",
62
+ "C101_1301",
63
+ "C101_1801",
64
+ "C101_2001",
65
+ "C101_2502",
66
+ "C103_2204",
67
+ "C104_2204",
68
+ "C108_2204",
69
+ "C108_1501",
70
+ "C108_1801",
71
+ "C108_2201",
72
+ "C113_0605",
73
+ "C123_2404",
74
+ "C123_2904",
75
+ "C123_0505",
76
+ "C124_2404",
77
+ "C124_2704",
78
+ "C124_0105",
79
+ "C127_2504",
80
+ "C127_0405",
81
+ "C127_1105",
82
+ "C128_2504",
83
+ "C128_0405",
84
+ "C128_1105",
85
+ "C132_2804",
86
+ "C132_0205",
87
+ "C132_1105",
88
+ "C137_3004",
89
+ "C137_2502",
90
+ "C138_3004",
91
+ "C138_2301",
92
+ "C138_3001",
93
+ "C138_0202",
94
+ "C138_0402",
95
+ "C140_3004",
96
+ "C140_2801",
97
+ "C140_3001",
98
+ "C140_0202",
99
+ "C140_0402",
100
+ "C140_0602",
101
+ "C140_0902",
102
+ "C140_1103",
103
+ "C142_3004",
104
+ "C145_3004",
105
+ "C145_0701",
106
+ "C145_1201",
107
+ "C145_1401",
108
+ "C145_1901",
109
+ "C145_2301",
110
+ "C146_3004",
111
+ "C146_1201",
112
+ "C146_1401",
113
+ "C146_1601",
114
+ "C146_1901",
115
+ "C146_2301",
116
+ "C146_2701",
117
+ "C146_2502",
118
+ "C147_3004",
119
+ "C147_1401",
120
+ "C147_1901",
121
+ "C152_0405",
122
+ "C161_1105",
123
+ "C164_1105",
124
+ "C167_1205",
125
+ "C168_1205",
126
+ "C168_2001",
127
+ "C168_2301",
128
+ "C168_3001",
129
+ "C168_0202",
130
+ "C168_0403",
131
+ "C169_1205",
132
+ "C169_2001",
133
+ "C169_2301",
134
+ "C169_0202",
135
+ "C169_0403",
136
+ "C170_1205",
137
+ "C170_2301",
138
+ "C170_0202",
139
+ "C170_0402",
140
+ "C170_0403",
141
+ "C187_2605",
142
+ "C187_1201",
143
+ "C187_1401",
144
+ "C187_1901",
145
+ "C187_2301",
146
+ "C187_2502",
147
+ "C190_2605",
148
+ "C190_2901",
149
+ "C190_0102",
150
+ "C190_0302",
151
+ "C190_0502",
152
+ "C190_0802",
153
+ "C190_1002",
154
+ "C190_0903",
155
+ "C193_2605",
156
+ "C195_2605",
157
+ "C197_2605",
158
+ "C212_2705",
159
+ "C214_2705",
160
+ "C234_2805",
161
+ "C238_2905",
162
+ "C240_2905",
163
+ "C246_2905",
164
+ "C251_2905"
165
+ ],
166
+ "train_donors": [
167
+ "C106",
168
+ "C126",
169
+ "C141",
170
+ "C237",
171
+ "C58"
172
+ ],
173
+ "run_json_check": true,
174
+ "n_reference_samples": 15,
175
+ "n_mixture_samples": 142,
176
+ "reference_cells": 62720,
177
+ "states": 29,
178
+ "states_merged_minor": 0,
179
+ "types": [
180
+ "B cell",
181
+ "DC",
182
+ "Monocyte",
183
+ "NK cell",
184
+ "Other",
185
+ "T cell"
186
+ ],
187
+ "missing_types": [],
188
+ "bp_axis_genes": 5911,
189
+ "genes_kept": 5687,
190
+ "genes_dropped_not_bulk_valid": 0,
191
+ "genes_dropped_zero_reference": 224,
192
+ "aggregates_sha256": "80b9c3401d8d4c724088317828a5c5095a5157ebc66d099e8399b6f948e507f8",
193
+ "files": {
194
+ "reference.tsv.gz": "0e07f9fb74a0b964b4e0e111aee81a1db9211b497f7e248af6c101f5416845b1",
195
+ "state_types.tsv": "2eb3901ac93b46e90ea92aff06d991d007a969ce496568320afd1b1c53e24fbe",
196
+ "mixture.tsv.gz": "00fa469c9a4e158d90ae6b7f4cddb20794fda81ea8e4350db371500e1244a258"
197
+ },
198
+ "tool_sha256": "70832dddc182ad1955d44d228bd08240649f355c2bc4f41856eea62e24620afc",
199
+ "common_sha256": "23599c7dc2bade09c3e0f6a613a4a63670adab6d1d1e8468ef175c89bd6e2ebf"
200
+ }
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/imperial_eskd/fewshot0/state_types.tsv ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ state type n_cells
2
+ B cell|Effector B cell B cell 300
3
+ B cell|Memory B cell B cell 964
4
+ B cell|Naive B cell B cell 1328
5
+ B cell|Plasma cell B cell 175
6
+ B cell|Transitional B cell B cell 527
7
+ DC|ASDC DC 53
8
+ DC|cDC1 DC 150
9
+ DC|cDC2 DC 1547
10
+ DC|pDC DC 520
11
+ Monocyte|CD14 monocyte Monocyte 4955
12
+ Monocyte|CD16 monocyte Monocyte 6378
13
+ Monocyte|Intermediate monocyte Monocyte 2180
14
+ NK cell|CD56bright NK cell NK cell 767
15
+ NK cell|CD56dim NK cell NK cell 6258
16
+ NK cell|Proliferating NK cell NK cell 911
17
+ Other|Erythrocyte Other 95
18
+ Other|ILC Other 115
19
+ Other|Platelet Other 702
20
+ Other|Progenitor cell Other 186
21
+ T cell|CD8aa T cell 1668
22
+ T cell|DN T cell T cell 146
23
+ T cell|MAIT T cell 424
24
+ T cell|Memory CD4 T cell T cell 10135
25
+ T cell|Memory CD8 T cell T cell 10733
26
+ T cell|Naive CD4 T cell T cell 3622
27
+ T cell|Naive CD8 T cell T cell 1611
28
+ T cell|Proliferating T cell T cell 138
29
+ T cell|Treg T cell 1430
30
+ T cell|gdT T cell 4702
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/imperial_eskd/fewshot0_full/SPLIT.json ADDED
@@ -0,0 +1,201 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "dataset": "imperial_eskd",
3
+ "kind": "fewshot",
4
+ "idx": 0,
5
+ "reference": [
6
+ "C58_1604",
7
+ "C58_2501",
8
+ "C58_2901",
9
+ "C58_0102",
10
+ "C58_0402",
11
+ "C58_1003",
12
+ "C106_2204",
13
+ "C126_2504",
14
+ "C126_3004",
15
+ "C126_0605",
16
+ "C141_2001",
17
+ "C141_2201",
18
+ "C141_3001",
19
+ "C141_0202",
20
+ "C237_2805"
21
+ ],
22
+ "mixture": [
23
+ "C20_1004",
24
+ "C20_1404",
25
+ "C21_1004",
26
+ "C21_1704",
27
+ "C21_2504",
28
+ "C23_2204",
29
+ "C31_1304",
30
+ "C31_2004",
31
+ "C31_2704",
32
+ "C33_1401",
33
+ "C33_1601",
34
+ "C33_1901",
35
+ "C34_1404",
36
+ "C34_2104",
37
+ "C34_2504",
38
+ "C36_1504",
39
+ "C36_1704",
40
+ "C36_2104",
41
+ "C40_1504",
42
+ "C40_2204",
43
+ "C40_0105",
44
+ "C42_1504",
45
+ "C42_2204",
46
+ "C42_2704",
47
+ "C60_2504",
48
+ "C63_1704",
49
+ "C63_2404",
50
+ "C63_2904",
51
+ "C65_1704",
52
+ "C65_2104",
53
+ "C65_2504",
54
+ "C69_1804",
55
+ "C82_2504",
56
+ "C85_2004",
57
+ "C93_2104",
58
+ "C93_2704",
59
+ "C93_0405",
60
+ "C101_0601",
61
+ "C101_1101",
62
+ "C101_1301",
63
+ "C101_1801",
64
+ "C101_2001",
65
+ "C101_2502",
66
+ "C103_2204",
67
+ "C104_2204",
68
+ "C108_2204",
69
+ "C108_1501",
70
+ "C108_1801",
71
+ "C108_2201",
72
+ "C113_0605",
73
+ "C123_2404",
74
+ "C123_2904",
75
+ "C123_0505",
76
+ "C124_2404",
77
+ "C124_2704",
78
+ "C124_0105",
79
+ "C127_2504",
80
+ "C127_0405",
81
+ "C127_1105",
82
+ "C128_2504",
83
+ "C128_0405",
84
+ "C128_1105",
85
+ "C132_2804",
86
+ "C132_0205",
87
+ "C132_1105",
88
+ "C137_3004",
89
+ "C137_2502",
90
+ "C138_3004",
91
+ "C138_2301",
92
+ "C138_3001",
93
+ "C138_0202",
94
+ "C138_0402",
95
+ "C140_3004",
96
+ "C140_2801",
97
+ "C140_3001",
98
+ "C140_0202",
99
+ "C140_0402",
100
+ "C140_0602",
101
+ "C140_0902",
102
+ "C140_1103",
103
+ "C142_3004",
104
+ "C145_3004",
105
+ "C145_0701",
106
+ "C145_1201",
107
+ "C145_1401",
108
+ "C145_1901",
109
+ "C145_2301",
110
+ "C146_3004",
111
+ "C146_1201",
112
+ "C146_1401",
113
+ "C146_1601",
114
+ "C146_1901",
115
+ "C146_2301",
116
+ "C146_2701",
117
+ "C146_2502",
118
+ "C147_3004",
119
+ "C147_1401",
120
+ "C147_1901",
121
+ "C152_0405",
122
+ "C161_1105",
123
+ "C164_1105",
124
+ "C167_1205",
125
+ "C168_1205",
126
+ "C168_2001",
127
+ "C168_2301",
128
+ "C168_3001",
129
+ "C168_0202",
130
+ "C168_0403",
131
+ "C169_1205",
132
+ "C169_2001",
133
+ "C169_2301",
134
+ "C169_0202",
135
+ "C169_0403",
136
+ "C170_1205",
137
+ "C170_2301",
138
+ "C170_0202",
139
+ "C170_0402",
140
+ "C170_0403",
141
+ "C187_2605",
142
+ "C187_1201",
143
+ "C187_1401",
144
+ "C187_1901",
145
+ "C187_2301",
146
+ "C187_2502",
147
+ "C190_2605",
148
+ "C190_2901",
149
+ "C190_0102",
150
+ "C190_0302",
151
+ "C190_0502",
152
+ "C190_0802",
153
+ "C190_1002",
154
+ "C190_0903",
155
+ "C193_2605",
156
+ "C195_2605",
157
+ "C197_2605",
158
+ "C212_2705",
159
+ "C214_2705",
160
+ "C234_2805",
161
+ "C238_2905",
162
+ "C240_2905",
163
+ "C246_2905",
164
+ "C251_2905"
165
+ ],
166
+ "train_donors": [
167
+ "C106",
168
+ "C126",
169
+ "C141",
170
+ "C237",
171
+ "C58"
172
+ ],
173
+ "run_json_check": true,
174
+ "n_reference_samples": 15,
175
+ "n_mixture_samples": 142,
176
+ "reference_cells": 62720,
177
+ "states": 29,
178
+ "states_merged_minor": 0,
179
+ "types": [
180
+ "B cell",
181
+ "DC",
182
+ "Monocyte",
183
+ "NK cell",
184
+ "Other",
185
+ "T cell"
186
+ ],
187
+ "missing_types": [],
188
+ "bp_axis_genes": 18599,
189
+ "genes_kept": 15994,
190
+ "genes_dropped_not_bulk_valid": 0,
191
+ "genes_dropped_zero_reference": 2605,
192
+ "gene_mode": "full",
193
+ "aggregates_sha256": "681a49cc9eb86b0d8b313bc417eef9b11c122894922181cf17a62765612ad1d4",
194
+ "files": {
195
+ "reference.tsv.gz": "8aaa148ffb290d0d8bc0744cf3b652890d15834363c41d2292758160562c6111",
196
+ "state_types.tsv": "2eb3901ac93b46e90ea92aff06d991d007a969ce496568320afd1b1c53e24fbe",
197
+ "mixture.tsv.gz": "8d83426539c4710c9d477fa3239855230aa6c6f5272df981905d413fe4087fc0"
198
+ },
199
+ "tool_sha256": "bb7df6866fa6c477bb1ddcf0e520d615346852be91adcb4d0bfdc2fac51e8bf0",
200
+ "common_sha256": "6f6e873744fff7d06ff3495b058bdceaa572fce7a932eb0fc6addb74f0711875"
201
+ }
paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/inputs/imperial_eskd/fewshot0_full/state_types.tsv ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ state type n_cells
2
+ B cell|Effector B cell B cell 300
3
+ B cell|Memory B cell B cell 964
4
+ B cell|Naive B cell B cell 1328
5
+ B cell|Plasma cell B cell 175
6
+ B cell|Transitional B cell B cell 527
7
+ DC|ASDC DC 53
8
+ DC|cDC1 DC 150
9
+ DC|cDC2 DC 1547
10
+ DC|pDC DC 520
11
+ Monocyte|CD14 monocyte Monocyte 4955
12
+ Monocyte|CD16 monocyte Monocyte 6378
13
+ Monocyte|Intermediate monocyte Monocyte 2180
14
+ NK cell|CD56bright NK cell NK cell 767
15
+ NK cell|CD56dim NK cell NK cell 6258
16
+ NK cell|Proliferating NK cell NK cell 911
17
+ Other|Erythrocyte Other 95
18
+ Other|ILC Other 115
19
+ Other|Platelet Other 702
20
+ Other|Progenitor cell Other 186
21
+ T cell|CD8aa T cell 1668
22
+ T cell|DN T cell T cell 146
23
+ T cell|MAIT T cell 424
24
+ T cell|Memory CD4 T cell T cell 10135
25
+ T cell|Memory CD8 T cell T cell 10733
26
+ T cell|Naive CD4 T cell T cell 3622
27
+ T cell|Naive CD8 T cell T cell 1611
28
+ T cell|Proliferating T cell T cell 138
29
+ T cell|Treg T cell 1430
30
+ T cell|gdT T cell 4702