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  1. paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_repro.csv +241 -0
  2. paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_spearman.csv +125 -0
  3. paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_stateset.csv +50 -0
  4. paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_stateset_by_scheme.csv +148 -0
paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_repro.csv ADDED
@@ -0,0 +1,241 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ scheme,comparison,scratch_arm,pretrained_arm,state,ratio_scratch,ratio_pretrained,abs_log2_scratch,abs_log2_pretrained,D,D_ci_lo,D_ci_hi,verdict,D_bc_ci_lo,D_bc_ci_hi,verdict_bc,D_pub,D_ci_lo_pub,D_ci_hi_pub,D_bc_ci_lo_pub,D_bc_ci_hi_pub,absdiff_D,absdiff_D_ci_lo,absdiff_D_ci_hi,absdiff_D_bc_ci_lo,absdiff_D_bc_ci_hi,section,arm,ratio_raw,log2_pc,log2_ci_lo,log2_ci_hi,gen_state,gen_parent,obsthin_state,obs_parent
2
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,C1Q-high monocyte (reference),1.00515,1.07489,0.00902101,0.105405,-0.0963844,-0.403345,0.503739,not significant,-0.707317,0.224548,not significant,-0.096384,-0.403345,0.503739,-0.707317,0.224548,3.65653e-07,5.88175e-08,3.45533e-07,4.73755e-07,5.38551e-08,comparison,null,null,null,null,null,null,null,null,null
3
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Cycling T/NK,0.50825,1.15404,0.956525,0.215779,0.740746,-0.433584,1.70106,not significant,-0.384391,1.71651,not significant,0.740746,-0.433584,1.70106,-0.384391,1.71651,1.43403e-08,3.85616e-07,4.39713e-07,2.65868e-07,2.93838e-07,comparison,null,null,null,null,null,null,null,null,null
4
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Cycling activated T (CD38/HLA-DR),0.403693,0.443262,1.29795,1.16305,0.134898,-0.371331,0.567816,not significant,-0.388215,0.542264,not significant,0.134898,-0.371331,0.567816,-0.388215,0.542264,4.05486e-07,3.55025e-07,4.05738e-07,2.82726e-07,3.90232e-07,comparison,null,null,null,null,null,null,null,null,null
5
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Proliferating T (label),1.36629,2.48923,0.453972,1.31729,-0.863321,-1.27343,-0.459239,scratch closer,-1.27257,-0.459233,scratch closer,-0.863321,-1.27343,-0.459239,-1.27257,-0.459233,1.12704e-09,1.24455e-07,5.18999e-08,3.24385e-07,3.22022e-07,comparison,null,null,null,null,null,null,null,null,null
6
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Plasmablast (label),1.12466,1.87444,0.173104,0.908225,-0.735121,-1.11289,0.0424589,not significant,-1.23497,-0.222538,scratch closer,-0.735121,-1.11289,0.042459,-1.23497,-0.222538,2.84654e-07,5.64059e-08,7.30625e-08,2.70789e-08,5.57486e-08,comparison,null,null,null,null,null,null,null,null,null
7
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Plasmablast (markers),0.349986,0.503011,1.51172,0.989379,0.522342,-0.0820004,0.991133,not significant,-0.0338526,1.02534,not significant,0.522342,-0.082,0.991133,-0.033853,1.02534,1.47128e-07,3.73528e-07,3.68409e-08,4.29255e-07,3.19966e-07,comparison,null,null,null,null,null,null,null,null,null
8
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,MS1 monocyte (IL1R2+),0.0956144,0.151909,3.38151,2.71603,0.665476,-0.451216,1.22606,not significant,-0.247289,1.28089,not significant,0.665476,-0.451216,1.22606,-0.247289,1.28089,3.86035e-07,4.43402e-07,3.43705e-07,1.66638e-07,1.86823e-07,comparison,null,null,null,null,null,null,null,null,null
9
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Cycling monocyte (Ye 2026),0.0613772,0.111874,3.98914,3.1438,0.845344,-0.483136,2.22637,not significant,-0.345137,2.30622,not significant,0.845344,-0.483136,2.22637,-0.345137,2.30622,1.14056e-07,1.58688e-07,1.48785e-07,3.23847e-07,1.93379e-08,comparison,null,null,null,null,null,null,null,null,null
10
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,ISG-high monocyte (positive control),0.324734,0.324813,1.61993,1.62017,-0.000246081,-1.30699,1.08337,not significant,-1.23919,1.11931,not significant,-0.000246,-1.30699,1.08337,-1.23919,1.11931,8.13854e-08,1.01035e-07,1.2765e-07,1.17426e-07,2.86213e-07,comparison,null,null,null,null,null,null,null,null,null
11
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,ISG-high T,0.145625,0.456853,2.75497,1.12204,1.63293,-0.160394,3.04087,not significant,-0.0285696,3.1351,not significant,1.63292,-0.160394,3.04087,-0.02857,3.1351,2.69436e-07,3.48258e-08,3.36143e-07,3.69556e-07,4.77535e-07,comparison,null,null,null,null,null,null,null,null,null
12
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,DN2 / ABC B,1.63464,1.10691,0.711969,0.14983,0.562138,-0.502613,0.807536,not significant,0.00825031,0.972841,pretrained closer,0.562138,-0.502613,0.807536,0.00825,0.972841,3.87302e-07,1.99461e-07,6.6885e-09,3.13414e-07,2.01714e-07,comparison,null,null,null,null,null,null,null,null,null
13
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,HSPC,0.479321,0.958643,1.01163,0.0385976,0.973033,-0.579996,1.93568,not significant,0.0733213,2.96716,pretrained closer,0.973033,-0.579996,1.93568,0.073321,2.96716,4.76003e-08,4.19232e-07,4.78207e-07,2.57485e-07,3.38603e-07,comparison,null,null,null,null,null,null,null,null,null
14
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Cytotoxic CD4 T,1.51594,1.79338,0.603001,0.845409,-0.242407,-0.748736,0.608844,not significant,-0.790866,0.509645,not significant,-0.242407,-0.748736,0.608844,-0.790866,0.509645,3.87891e-07,7.61343e-08,9.15451e-08,4.2507e-07,2.67512e-07,comparison,null,null,null,null,null,null,null,null,null
15
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Granulocyte-like (LDG),0.128721,0.0545427,2.95174,4.18227,-1.23053,-2.07312,-0.326881,scratch closer,-2.05904,-0.304096,scratch closer,-1.23053,-2.07312,-0.326881,-2.05904,-0.304096,2.33854e-07,3.87058e-07,4.95892e-08,4.28549e-07,1.67721e-07,comparison,null,null,null,null,null,null,null,null,null
16
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,Platelet signal in monocytes (negative control),0.59832,0.835598,0.740113,0.258647,0.481466,-0.0207072,0.747433,not significant,0.0503512,0.76952,pretrained closer,0.481466,-0.020707,0.747433,0.050351,0.76952,1.11177e-07,2.45997e-07,3.96344e-07,1.73055e-07,2.70329e-07,comparison,null,null,null,null,null,null,null,null,null
17
+ V0_published,5 pairs: scratch vs LoRA,scratch_n5__raw,lora_n5__raw,AGGREGATE,null,null,1.52356,1.29978,0.22378,-0.0780742,0.405503,not significant,0.00990003,0.45829,pretrained closer,0.22378,-0.078074,0.405503,0.0099,0.45829,1.81421e-07,2.36455e-07,4.16424e-07,3.2231e-08,1.95281e-07,comparison,null,null,null,null,null,null,null,null,null
18
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,C1Q-high monocyte (reference),0.466973,1.05336,1.09221,0.0777622,1.01444,-0.264498,1.34254,not significant,0.381993,1.46711,pretrained closer,1.01444,-0.264498,1.34254,0.381993,1.46711,3.44014e-07,3.68742e-07,2.06339e-07,4.74171e-07,3.74565e-07,comparison,null,null,null,null,null,null,null,null,null
19
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Cycling T/NK,0.415901,0.931543,1.23973,0.0922794,1.14745,0.200294,1.78265,pretrained closer,0.476103,2.07857,pretrained closer,1.14745,0.200294,1.78265,0.476103,2.07857,3.64273e-07,2.73075e-07,1.91644e-08,1.25079e-07,4.64152e-07,comparison,null,null,null,null,null,null,null,null,null
20
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Cycling activated T (CD38/HLA-DR),0.314981,0.408872,1.65183,1.27962,0.372211,-0.369907,0.957741,not significant,-0.366098,0.958037,not significant,0.372211,-0.369907,0.957741,-0.366098,0.958037,1.90013e-07,3.63915e-07,1.61681e-07,1.65943e-07,4.58301e-07,comparison,null,null,null,null,null,null,null,null,null
21
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Proliferating T (label),1.12718,1.48979,0.177643,0.578195,-0.400551,-0.815101,0.204075,not significant,-1.00561,0.00793044,not significant,-0.400551,-0.815101,0.204075,-1.00561,0.00793,2.69415e-07,3.27272e-07,4.21668e-08,4.75054e-07,4.43703e-07,comparison,null,null,null,null,null,null,null,null,null
22
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Plasmablast (label),1.24001,3.47492,0.313538,1.79747,-1.48393,-2.26838,0.344367,not significant,-2.45717,0.0226252,not significant,-1.48393,-2.26838,0.344367,-2.45717,0.022625,4.1951e-07,1.45912e-07,3.10185e-07,9.92631e-08,1.73308e-07,comparison,null,null,null,null,null,null,null,null,null
23
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Plasmablast (markers),0.642013,1.0399,0.637634,0.0573868,0.580247,-1.00456,0.882856,not significant,0.161867,1.48219,pretrained closer,0.580247,-1.00456,0.882856,0.161867,1.48219,1.05533e-07,1.84546e-07,1.35041e-07,2.36143e-08,1.78217e-07,comparison,null,null,null,null,null,null,null,null,null
24
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,MS1 monocyte (IL1R2+),0.404617,0.205964,1.30354,2.27559,-0.972054,-1.44155,0.0349552,not significant,-1.4917,-0.0978129,scratch closer,-0.972054,-1.44155,0.034955,-1.4917,-0.097813,2.97097e-07,4.23365e-07,2.20405e-07,1.4193e-07,6.10397e-08,comparison,null,null,null,null,null,null,null,null,null
25
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Cycling monocyte (Ye 2026),0.0867531,0.0895574,3.48559,3.43715,0.0484442,-0.946967,1.07035,not significant,-0.926579,1.1019,not significant,0.048444,-0.946967,1.07035,-0.926579,1.1019,2.39957e-07,4.64913e-07,4.06615e-07,4.2716e-07,2.87778e-07,comparison,null,null,null,null,null,null,null,null,null
26
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,ISG-high monocyte (positive control),0.306379,0.435961,1.70174,1.19397,0.507772,-0.455,1.26155,not significant,-0.388731,1.29749,not significant,0.507772,-0.455,1.26155,-0.388731,1.29748,1.15342e-07,2.75197e-07,1.16257e-07,3.75639e-07,1.55732e-07,comparison,null,null,null,null,null,null,null,null,null
27
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,ISG-high T,0.169555,0.373078,2.53722,1.4128,1.12443,-0.231147,2.22897,not significant,-0.179553,2.27709,not significant,1.12443,-0.231147,2.22898,-0.179553,2.27709,4.3725e-07,1.05335e-07,3.42872e-07,9.6218e-09,1.38382e-07,comparison,null,null,null,null,null,null,null,null,null
28
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,DN2 / ABC B,0.633688,0.350657,0.652851,1.50187,-0.849022,-1.77717,0.0230069,not significant,-1.77717,0.0230069,not significant,-0.849022,-1.77717,0.023007,-1.77717,0.023007,3.08001e-07,3.474e-08,7.07059e-08,3.474e-08,7.07059e-08,comparison,null,null,null,null,null,null,null,null,null
29
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,HSPC,1.33828,0.573547,0.435506,0.760045,-0.324538,-2.12108,0.986917,not significant,-1.9935,1.0868,not significant,-0.324538,-2.12108,0.986917,-1.9935,1.0868,2.10871e-07,2.92588e-07,4.86813e-07,2.53264e-07,3.9843e-08,comparison,null,null,null,null,null,null,null,null,null
30
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Cytotoxic CD4 T,0.800203,0.895231,0.313847,0.152535,0.161312,-0.232304,0.537524,not significant,-0.180251,0.604482,not significant,0.161312,-0.232304,0.537524,-0.180251,0.604482,1.79008e-07,4.50203e-07,4.06163e-07,2.23288e-07,2.93052e-07,comparison,null,null,null,null,null,null,null,null,null
31
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Granulocyte-like (LDG),0.0430958,0.0382542,4.51658,4.68604,-0.169463,-1.0184,0.507479,not significant,-0.948816,0.536194,not significant,-0.169463,-1.01839,0.507479,-0.948816,0.536194,4.21304e-07,4.18998e-07,3.44718e-07,2.00647e-07,2.75246e-08,comparison,null,null,null,null,null,null,null,null,null
32
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,Platelet signal in monocytes (negative control),0.392348,0.547251,1.3474,0.867875,0.479526,-0.124987,0.912627,not significant,-0.0889394,0.93658,not significant,0.479526,-0.124987,0.912627,-0.088939,0.93658,2.57672e-07,3.62411e-07,4.1824e-07,3.9818e-07,2.99911e-07,comparison,null,null,null,null,null,null,null,null,null
33
+ V0_published,58 pairs: scratch vs LoRA,scratch_full__raw,real_lora__raw,AGGREGATE,null,null,1.41213,1.39298,0.0191519,-0.349716,0.254627,not significant,-0.238393,0.379116,not significant,0.019152,-0.349716,0.254627,-0.238393,0.379116,7.40506e-08,1.22507e-07,3.43553e-07,4.81015e-07,2.27663e-07,comparison,null,null,null,null,null,null,null,null,null
34
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,C1Q-high monocyte (reference),0.466973,0.916807,1.09221,0.122262,0.969945,-0.0986847,1.2492,not significant,0.53441,1.48447,pretrained closer,0.969945,-0.098685,1.2492,0.53441,1.48447,2.02557e-07,2.68006e-07,2.85773e-07,3.75167e-07,3.54242e-07,comparison,null,null,null,null,null,null,null,null,null
35
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Cycling T/NK,0.415901,1.336,1.23973,0.424763,0.814966,-0.142378,1.8688,not significant,-0.213377,1.82773,not significant,0.814966,-0.142378,1.8688,-0.213377,1.82773,7.27767e-08,4.96122e-08,4.12051e-08,3.21526e-08,2.87494e-07,comparison,null,null,null,null,null,null,null,null,null
36
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Cycling activated T (CD38/HLA-DR),0.314981,0.578323,1.65183,0.782009,0.869821,0.238723,1.39487,pretrained closer,0.156521,1.3721,pretrained closer,0.869821,0.238723,1.39487,0.156521,1.3721,3.39888e-08,8.62423e-08,4.64108e-07,4.86007e-07,2.32015e-07,comparison,null,null,null,null,null,null,null,null,null
37
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Proliferating T (label),1.12718,1.84558,0.177643,0.886455,-0.708811,-1.03063,-0.0969414,scratch closer,-1.15511,-0.315862,scratch closer,-0.708811,-1.03063,-0.096941,-1.15511,-0.315862,2.78469e-07,1.01695e-07,4.31425e-07,2.94376e-07,2.44344e-07,comparison,null,null,null,null,null,null,null,null,null
38
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Plasmablast (label),1.24001,3.28027,0.313538,1.71439,-1.40085,-2.01757,-0.13381,scratch closer,-2.2011,-0.416406,scratch closer,-1.40085,-2.01757,-0.13381,-2.2011,-0.416406,3.07863e-07,2.37105e-07,3.90335e-07,2.26832e-07,2.59883e-07,comparison,null,null,null,null,null,null,null,null,null
39
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Plasmablast (markers),0.642013,1.15447,0.637634,0.208107,0.429526,-0.865748,1.00968,not significant,-0.67825,1.08862,not significant,0.429526,-0.865748,1.00968,-0.67825,1.08862,2.25605e-07,4.72023e-07,7.23164e-08,1.60337e-08,4.53377e-07,comparison,null,null,null,null,null,null,null,null,null
40
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,MS1 monocyte (IL1R2+),0.404617,0.361097,1.30354,1.46743,-0.163893,-0.80802,0.857015,not significant,-0.862868,0.774349,not significant,-0.163893,-0.80802,0.857015,-0.862868,0.774349,1.69063e-07,4.96279e-07,5.02842e-09,5.59469e-08,8.13603e-08,comparison,null,null,null,null,null,null,null,null,null
41
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Cycling monocyte (Ye 2026),0.0867531,0.113928,3.48559,3.10037,0.385221,-0.429232,1.28524,not significant,-0.503188,1.2283,not significant,0.385221,-0.429232,1.28524,-0.503188,1.2283,4.36695e-07,2.33328e-07,3.25232e-07,9.63079e-08,3.57853e-07,comparison,null,null,null,null,null,null,null,null,null
42
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,ISG-high monocyte (positive control),0.306379,0.576362,1.70174,0.792188,0.909549,-0.303309,1.7314,not significant,-0.224269,1.82297,not significant,0.909549,-0.303309,1.7314,-0.224269,1.82297,5.76799e-08,2.90331e-07,3.05894e-07,2.71852e-07,2.83815e-07,comparison,null,null,null,null,null,null,null,null,null
43
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,ISG-high T,0.169555,0.449465,2.53722,1.14447,1.39275,-0.222665,2.66394,not significant,-0.173705,2.72036,not significant,1.39275,-0.222665,2.66394,-0.173705,2.72036,2.69545e-07,9.76418e-08,4.6092e-07,1.36729e-07,3.81711e-07,comparison,null,null,null,null,null,null,null,null,null
44
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,DN2 / ABC B,0.633688,0.372326,0.652851,1.41678,-0.763931,-1.3961,0.00828975,not significant,-1.43191,-0.04734,scratch closer,-0.763931,-1.3961,0.00829,-1.43191,-0.04734,1.43931e-07,1.73766e-08,2.5086e-07,1.29516e-07,2.64169e-08,comparison,null,null,null,null,null,null,null,null,null
45
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,HSPC,1.33828,0.782109,0.435506,0.324388,0.111118,-1.01752,0.997173,not significant,-0.94273,1.03695,not significant,0.111118,-1.01752,0.997173,-0.94273,1.03695,2.47369e-08,2.39282e-07,6.79428e-08,4.01434e-07,4.27086e-07,comparison,null,null,null,null,null,null,null,null,null
46
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Cytotoxic CD4 T,0.800203,1.32217,0.313847,0.407641,-0.093794,-0.629953,0.477168,not significant,-0.647186,0.447271,not significant,-0.093794,-0.629953,0.477168,-0.647186,0.447271,4.09605e-08,2.17706e-07,1.28043e-07,2.81848e-07,3.25214e-07,comparison,null,null,null,null,null,null,null,null,null
47
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Granulocyte-like (LDG),0.0430958,0.0413254,4.51658,4.57531,-0.0587304,-0.630206,0.503025,not significant,-0.663258,0.455495,not significant,-0.05873,-0.630206,0.503025,-0.663258,0.455495,4.05307e-07,3.44454e-07,2.55731e-07,1.83273e-07,4.61667e-07,comparison,null,null,null,null,null,null,null,null,null
48
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,Platelet signal in monocytes (negative control),0.392348,0.699329,1.3474,0.514552,0.83285,0.446995,1.18937,pretrained closer,0.446263,1.18824,pretrained closer,0.83285,0.446995,1.18937,0.446263,1.18824,1.3135e-07,1.85589e-07,2.51226e-07,1.62059e-07,4.45369e-07,comparison,null,null,null,null,null,null,null,null,null
49
+ V0_published,58 pairs: scratch vs full FT,scratch_full__raw,real_full__raw,AGGREGATE,null,null,1.41213,1.27495,0.13718,-0.138205,0.406414,not significant,-0.128666,0.412582,not significant,0.13718,-0.138205,0.406414,-0.128666,0.412582,2.50515e-07,8.34342e-08,1.19141e-07,7.87678e-08,2.90513e-07,comparison,null,null,null,null,null,null,null,null,null
50
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,C1Q-high monocyte (reference),0.5325,0.625773,0.90289,0.671411,0.231478,-0.644483,0.783102,not significant,-0.607347,0.794214,not significant,0.231478,-0.644483,0.783102,-0.607347,0.794214,3.29761e-07,1.95867e-07,2.09592e-08,3.02977e-07,4.22587e-07,comparison,null,null,null,null,null,null,null,null,null
51
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Cycling T/NK,0.479032,0.987329,1.0398,0.00844623,1.03136,-0.0077378,1.52616,not significant,0.482728,1.83131,pretrained closer,1.03136,-0.007738,1.52616,0.482728,1.83131,4.68883e-07,1.99097e-07,4.99258e-07,1.5609e-07,3.27726e-07,comparison,null,null,null,null,null,null,null,null,null
52
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Cycling activated T (CD38/HLA-DR),0.278936,0.45704,1.82478,1.1197,0.705079,-0.0754009,1.49651,not significant,-0.12477,1.4295,not significant,0.705079,-0.075401,1.49651,-0.12477,1.4295,2.1501e-07,9.02116e-08,4.49039e-07,4.10355e-07,4.18462e-07,comparison,null,null,null,null,null,null,null,null,null
53
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Proliferating T (label),0.977178,1.76032,0.0275878,0.818281,-0.790693,-1.07785,-0.0846297,scratch closer,-1.3173,-0.487549,scratch closer,-0.790693,-1.07785,-0.08463,-1.3173,-0.487549,2.83136e-07,2.03356e-07,2.60039e-07,4.18893e-07,2.88641e-07,comparison,null,null,null,null,null,null,null,null,null
54
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Plasmablast (label),1.17513,2.29979,0.236232,1.20276,-0.966525,-1.53999,0.358279,not significant,-1.67855,-0.0178657,scratch closer,-0.966525,-1.53999,0.358279,-1.67855,-0.017866,2.95449e-07,4.12701e-07,2.58729e-07,1.15346e-07,3.12454e-07,comparison,null,null,null,null,null,null,null,null,null
55
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Plasmablast (markers),0.734132,0.710737,0.444398,0.4911,-0.0467015,-0.887677,0.342857,not significant,-0.680517,0.438525,not significant,-0.046702,-0.887677,0.342857,-0.680517,0.438525,4.53158e-07,2.59604e-07,3.17441e-07,4.16137e-07,4.4898e-07,comparison,null,null,null,null,null,null,null,null,null
56
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,MS1 monocyte (IL1R2+),0.4621,0.301019,1.11191,1.72942,-0.617507,-1.37861,0.399131,not significant,-1.43836,0.353988,not significant,-0.617507,-1.37861,0.399131,-1.43836,0.353988,3.84714e-07,3.26072e-07,4.8829e-08,3.54843e-07,1.64623e-07,comparison,null,null,null,null,null,null,null,null,null
57
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Cycling monocyte (Ye 2026),0.0869464,0.0962428,3.4769,3.33587,0.141031,-0.774592,0.97613,not significant,-0.795467,0.961359,not significant,0.141031,-0.774592,0.97613,-0.795467,0.961359,1.32357e-08,1.44448e-07,2.83111e-08,4.71615e-07,3.29579e-07,comparison,null,null,null,null,null,null,null,null,null
58
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,ISG-high monocyte (positive control),0.263355,0.597133,1.91846,0.741134,1.17732,-0.275567,2.4229,not significant,-0.204023,2.48468,not significant,1.17732,-0.275567,2.4229,-0.204023,2.48468,4.07045e-07,2.16503e-07,2.36852e-07,4.6893e-07,2.3754e-07,comparison,null,null,null,null,null,null,null,null,null
59
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,ISG-high T,0.183512,0.532931,2.42462,0.901032,1.52359,0.0809311,2.49036,pretrained closer,0.125493,2.53997,pretrained closer,1.52359,0.080931,2.49036,0.125493,2.53997,4.8145e-07,1.16939e-07,3.86457e-07,3.30324e-07,3.83591e-08,comparison,null,null,null,null,null,null,null,null,null
60
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,DN2 / ABC B,0.459289,0.28267,1.11463,1.81109,-0.696454,-1.20622,-0.0774192,scratch closer,-1.19519,-0.054564,scratch closer,-0.696454,-1.20622,-0.077419,-1.19519,-0.054564,2.95121e-07,1.20614e-07,2.21163e-07,2.13598e-07,1.34756e-08,comparison,null,null,null,null,null,null,null,null,null
61
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,HSPC,0.955911,0.710699,0.0418155,0.460432,-0.418616,-1.73364,0.531408,not significant,-2.28048,0.326643,not significant,-0.418616,-1.73364,0.531408,-2.28048,0.326643,2.47805e-07,3.33301e-07,1.44593e-07,1.14999e-07,2.33626e-07,comparison,null,null,null,null,null,null,null,null,null
62
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Cytotoxic CD4 T,1.18755,1.23372,0.252604,0.307867,-0.055263,-0.430846,0.522995,not significant,-0.484169,0.453196,not significant,-0.055263,-0.430846,0.522995,-0.484169,0.453196,3.14693e-08,2.35397e-07,2.09606e-07,3.74623e-07,2.24467e-08,comparison,null,null,null,null,null,null,null,null,null
63
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Granulocyte-like (LDG),0.0585732,0.0252858,4.07852,5.27175,-1.19323,-2.18086,-0.355553,scratch closer,-2.14473,-0.346448,scratch closer,-1.19323,-2.18086,-0.355553,-2.14473,-0.346448,1.72532e-07,4.71993e-07,4.67334e-07,3.31817e-07,2.31695e-07,comparison,null,null,null,null,null,null,null,null,null
64
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,Platelet signal in monocytes (negative control),0.445627,0.544771,1.16369,0.874366,0.289324,-0.25081,0.848323,not significant,-0.283627,0.822629,not significant,0.289324,-0.25081,0.848323,-0.283627,0.822629,2.5547e-07,3.34573e-07,1.66636e-07,3.80179e-07,5.29461e-08,comparison,null,null,null,null,null,null,null,null,null
65
+ V0_published,58 pairs + recipes: scratch vs LoRA,scratch_recipe__raw,lora_recipe__raw,AGGREGATE,null,null,1.3059,1.39455,-0.0886499,-0.378816,0.177756,not significant,-0.396415,0.163818,not significant,-0.08865,-0.378816,0.177756,-0.396415,0.163818,1.22795e-07,8.56925e-08,2.1997e-07,1.77995e-07,1.8389e-09,comparison,null,null,null,null,null,null,null,null,null
66
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,C1Q-high monocyte (reference),1.00515,0.024986,0.00902101,5.2643,-5.25527,-6.31051,-3.47507,scratch closer,-7.13856,-4.23296,scratch closer,-5.25528,-6.31051,-3.47507,-7.13856,-4.23296,2.55955e-07,4.29877e-07,4.95334e-07,1.79879e-07,4.77709e-07,comparison,null,null,null,null,null,null,null,null,null
67
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Cycling T/NK,0.50825,2.51667,0.956525,1.33804,-0.381514,-1.64195,1.00754,not significant,-1.78704,0.850932,not significant,-0.381514,-1.64195,1.00754,-1.78704,0.850932,4.88376e-07,4.24199e-07,9.37506e-08,4.07345e-07,2.41816e-07,comparison,null,null,null,null,null,null,null,null,null
68
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Cycling activated T (CD38/HLA-DR),0.403693,0.64599,1.29795,0.610712,0.687241,0.0260591,1.33907,pretrained closer,0.0371805,1.37504,pretrained closer,0.687241,0.026059,1.33907,0.037181,1.37504,3.20405e-07,9.96181e-08,9.11831e-08,4.90935e-07,1.59206e-07,comparison,null,null,null,null,null,null,null,null,null
69
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Proliferating T (label),1.36629,3.87832,0.453972,1.95677,-1.5028,-2.15874,-0.605227,scratch closer,-2.15357,-0.597921,scratch closer,-1.5028,-2.15874,-0.605227,-2.15357,-0.597921,3.5934e-07,1.64192e-07,3.39283e-07,1.66049e-07,2.20407e-07,comparison,null,null,null,null,null,null,null,null,null
70
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Plasmablast (label),1.12466,1.50676,0.173104,0.593892,-0.420788,-1.22968,0.413543,not significant,-1.27824,0.310135,not significant,-0.420788,-1.22968,0.413543,-1.27824,0.310135,4.13233e-07,2.38452e-07,4.48284e-08,3.67553e-08,4.66987e-07,comparison,null,null,null,null,null,null,null,null,null
71
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Plasmablast (markers),0.349986,0.781626,1.51172,0.352954,1.15877,0.0886224,1.55072,pretrained closer,0.420717,1.69654,pretrained closer,1.15877,0.088622,1.55072,0.420717,1.69654,1.22538e-07,3.84415e-07,4.25152e-07,1.60023e-07,4.21648e-07,comparison,null,null,null,null,null,null,null,null,null
72
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,MS1 monocyte (IL1R2+),0.0956144,0.0838364,3.38151,3.5713,-0.189793,-1.66958,0.503136,not significant,-1.48827,0.553884,not significant,-0.189793,-1.66958,0.503136,-1.48827,0.553884,2.9031e-07,9.54031e-08,1.68038e-08,2.16329e-07,5.88086e-08,comparison,null,null,null,null,null,null,null,null,null
73
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Cycling monocyte (Ye 2026),0.0613772,0.0934457,3.98914,3.39492,0.59422,-0.646465,1.79718,not significant,-0.589144,1.84956,not significant,0.59422,-0.646465,1.79718,-0.589144,1.84956,1.67345e-07,1.49543e-07,1.24263e-07,4.69938e-08,3.08795e-07,comparison,null,null,null,null,null,null,null,null,null
74
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,ISG-high monocyte (positive control),0.324734,2.62664,1.61993,1.39332,0.22661,-2.06135,1.75142,not significant,-2.17674,1.67793,not significant,0.22661,-2.06135,1.75142,-2.17674,1.67793,3.28753e-07,1.91206e-07,3.15267e-07,5.82115e-08,3.23639e-07,comparison,null,null,null,null,null,null,null,null,null
75
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,ISG-high T,0.145625,2.70515,2.75497,1.44054,1.31443,-0.379268,2.85318,not significant,-0.399615,2.82592,not significant,1.31443,-0.379268,2.85318,-0.399615,2.82592,4.17088e-07,1.00949e-07,3.44425e-07,4.71858e-07,1.71648e-07,comparison,null,null,null,null,null,null,null,null,null
76
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,DN2 / ABC B,1.63464,1.26791,0.711969,0.345706,0.366263,-0.426523,0.707419,not significant,-0.0953512,0.836449,not significant,0.366263,-0.426523,0.707419,-0.095351,0.836449,5.5728e-08,4.84688e-07,4.23043e-07,1.66164e-07,2.8113e-07,comparison,null,null,null,null,null,null,null,null,null
77
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,HSPC,0.479321,0.88238,1.01163,0.151057,0.860574,-0.577855,1.97494,not significant,-0.150063,2.72113,not significant,0.860574,-0.577855,1.97494,-0.150063,2.72113,1.23889e-07,3.70783e-08,4.30302e-07,2.33773e-08,3.66178e-07,comparison,null,null,null,null,null,null,null,null,null
78
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Cytotoxic CD4 T,1.51594,0.467215,0.603001,1.06247,-0.459472,-1.54294,1.1969,not significant,-1.59707,1.02965,not significant,-0.459472,-1.54294,1.1969,-1.59707,1.02965,4.88186e-07,4.47417e-07,3.3704e-09,4.27142e-07,4.07217e-07,comparison,null,null,null,null,null,null,null,null,null
79
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Granulocyte-like (LDG),0.128721,0.139565,2.95174,2.831,0.120737,-0.455348,0.952646,not significant,-0.61221,0.729343,not significant,0.120737,-0.455348,0.952646,-0.61221,0.729343,5.09608e-08,3.65153e-07,8.30148e-08,4.17597e-07,4.89737e-07,comparison,null,null,null,null,null,null,null,null,null
80
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,Platelet signal in monocytes (negative control),0.59832,0.359741,0.740113,1.47313,-0.733021,-1.17367,-0.378423,scratch closer,-1.10317,-0.300876,scratch closer,-0.733021,-1.17367,-0.378423,-1.10317,-0.300876,4.67692e-07,4.35269e-07,3.25327e-07,3.68241e-08,1.00118e-07,comparison,null,null,null,null,null,null,null,null,null
81
+ V0_published,ref: scratch 5 pairs vs zero-shot,scratch_n5__raw,zs__raw,AGGREGATE,null,null,1.52356,1.76259,-0.239032,-0.514982,0.00500708,not significant,-0.507359,0.00809046,not significant,-0.239032,-0.514982,0.005007,-0.507359,0.00809,3.88256e-07,4.20896e-07,7.73685e-08,4.78128e-07,4.62158e-07,comparison,null,null,null,null,null,null,null,null,null
82
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,C1Q-high monocyte (reference),0.466973,0.024986,1.09221,5.2643,-4.17209,-5.38885,-3.18435,scratch closer,-5.23415,-3.09351,scratch closer,-4.17209,-5.38885,-3.18434,-5.23415,-3.09351,1.85796e-07,9.3492e-08,6.56601e-08,1.35692e-08,3.25128e-07,comparison,null,null,null,null,null,null,null,null,null
83
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Cycling T/NK,0.415901,2.51667,1.23973,1.33804,-0.0983106,-1.16937,1.09442,not significant,-1.33459,0.973457,not significant,-0.098311,-1.16937,1.09442,-1.33459,0.973457,3.92805e-07,3.25185e-07,1.84403e-07,1.72222e-07,1.06786e-08,comparison,null,null,null,null,null,null,null,null,null
84
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Cycling activated T (CD38/HLA-DR),0.314981,0.64599,1.65183,0.610712,1.04112,0.0621028,1.91969,pretrained closer,0.073904,1.9259,pretrained closer,1.04112,0.062103,1.91969,0.073904,1.9259,1.17488e-07,2.29626e-07,4.36178e-07,4.88417e-08,4.81356e-07,comparison,null,null,null,null,null,null,null,null,null
85
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Proliferating T (label),1.12718,3.87832,0.177643,1.95677,-1.77913,-2.4575,-0.78557,scratch closer,-2.61956,-1.01731,scratch closer,-1.77913,-2.4575,-0.78557,-2.61956,-1.01731,9.18959e-08,2.18936e-07,4.44953e-07,4.32918e-07,7.30672e-08,comparison,null,null,null,null,null,null,null,null,null
86
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Plasmablast (label),1.24001,1.50676,0.313538,0.593892,-0.280354,-0.956342,0.438542,not significant,-0.963976,0.43016,not significant,-0.280354,-0.956342,0.438542,-0.963976,0.43016,1.17966e-07,3.48261e-07,4.36877e-07,4.88179e-07,2.3081e-07,comparison,null,null,null,null,null,null,null,null,null
87
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Plasmablast (markers),0.642013,0.781626,0.637634,0.352954,0.284679,-0.56547,0.678425,not significant,-0.248785,0.945493,not significant,0.284679,-0.56547,0.678425,-0.248785,0.945493,4.47486e-07,3.55216e-07,8.2515e-08,4.86699e-07,5.70625e-08,comparison,null,null,null,null,null,null,null,null,null
88
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,MS1 monocyte (IL1R2+),0.404617,0.0838364,1.30354,3.5713,-2.26777,-3.62588,-0.902858,scratch closer,-3.59869,-0.894161,scratch closer,-2.26777,-3.62588,-0.902858,-3.59869,-0.894161,1.5163e-07,2.79809e-07,4.73186e-07,4.57691e-07,3.52638e-07,comparison,null,null,null,null,null,null,null,null,null
89
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Cycling monocyte (Ye 2026),0.0867531,0.0934457,3.48559,3.39492,0.0906723,-1.27063,1.15435,not significant,-1.15184,1.19786,not significant,0.090672,-1.27063,1.15435,-1.15184,1.19786,3.1488e-07,4.65138e-07,2.33022e-07,3.04728e-07,3.83101e-07,comparison,null,null,null,null,null,null,null,null,null
90
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,ISG-high monocyte (positive control),0.306379,2.62664,1.70174,1.39332,0.308419,-1.71363,1.49532,not significant,-1.75636,1.4677,not significant,0.308419,-1.71363,1.49531,-1.75636,1.4677,8.51499e-09,1.16983e-07,3.04655e-07,2.36691e-07,1.57562e-07,comparison,null,null,null,null,null,null,null,null,null
91
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,ISG-high T,0.169555,2.70515,2.53722,1.44054,1.09668,-0.432566,2.37399,not significant,-0.617183,2.28193,not significant,1.09668,-0.432566,2.37399,-0.617183,2.28193,4.86201e-08,1.57173e-07,4.82219e-07,4.27124e-07,3.81392e-07,comparison,null,null,null,null,null,null,null,null,null
92
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,DN2 / ABC B,0.633688,1.26791,0.652851,0.345706,0.307145,-1.02408,1.1721,not significant,-0.885056,1.2645,not significant,0.307145,-1.02408,1.1721,-0.885056,1.2645,1.76572e-07,8.03057e-08,3.2804e-08,4.61782e-07,2.29841e-08,comparison,null,null,null,null,null,null,null,null,null
93
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,HSPC,1.33828,0.88238,0.435506,0.151057,0.28445,-0.896287,1.01086,not significant,-0.449449,1.31531,not significant,0.28445,-0.896287,1.01086,-0.449449,1.31531,4.21851e-07,1.30172e-07,4.37638e-07,5.1867e-08,1.96635e-07,comparison,null,null,null,null,null,null,null,null,null
94
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Cytotoxic CD4 T,0.800203,0.467215,0.313847,1.06247,-0.748626,-1.58055,0.0919568,not significant,-1.68233,-0.0043457,scratch closer,-0.748626,-1.58055,0.091957,-1.68233,-0.004346,4.77984e-07,1.4451e-07,1.56978e-07,8.27102e-08,3.00673e-07,comparison,null,null,null,null,null,null,null,null,null
95
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Granulocyte-like (LDG),0.0430958,0.139565,4.51658,2.831,1.68558,1.03726,2.55648,pretrained closer,0.917057,2.39803,pretrained closer,1.68558,1.03727,2.55648,0.917057,2.39803,3.08172e-07,2.82298e-07,4.65762e-07,3.13015e-07,5.12728e-08,comparison,null,null,null,null,null,null,null,null,null
96
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,Platelet signal in monocytes (negative control),0.392348,0.359741,1.3474,1.47313,-0.125732,-0.656223,0.331628,not significant,-0.598856,0.370848,not significant,-0.125732,-0.656223,0.331628,-0.598856,0.370848,5.92717e-08,2.36684e-07,1.96094e-07,4.8635e-07,5.1368e-08,comparison,null,null,null,null,null,null,null,null,null
97
+ V0_published,ref: scratch 58 pairs vs zero-shot,scratch_full__raw,zs__raw,AGGREGATE,null,null,1.41213,1.76259,-0.350458,-0.660323,-0.128444,scratch closer,-0.61883,-0.10131,scratch closer,-0.350458,-0.660323,-0.128444,-0.61883,-0.10131,2.591e-07,1.81835e-08,2.74838e-07,3.72263e-07,1.55961e-07,comparison,null,null,null,null,null,null,null,null,null
98
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,C1Q-high monocyte (reference),0.5325,0.024986,0.90289,5.2643,-4.36141,-5.58702,-3.56459,scratch closer,-5.51604,-3.51773,scratch closer,-4.36141,-5.58702,-3.56459,-5.51604,-3.51773,5.51992e-08,1.52059e-07,2.68405e-07,4.50442e-07,2.50217e-07,comparison,null,null,null,null,null,null,null,null,null
99
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Cycling T/NK,0.479032,2.51667,1.0398,1.33804,-0.298235,-1.33691,0.864509,not significant,-1.564,0.699805,not significant,-0.298235,-1.33691,0.864509,-1.564,0.699805,8.05117e-08,1.75525e-07,1.55315e-07,3.86108e-07,4.59196e-07,comparison,null,null,null,null,null,null,null,null,null
100
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Cycling activated T (CD38/HLA-DR),0.278936,0.64599,1.82478,0.610712,1.21407,0.207049,2.2132,pretrained closer,0.26729,2.23955,pretrained closer,1.21407,0.207049,2.2132,0.26729,2.23955,3.35242e-07,3.46779e-07,3.99446e-07,3.74735e-07,3.50398e-07,comparison,null,null,null,null,null,null,null,null,null
101
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Proliferating T (label),0.977178,3.87832,0.0275878,1.95677,-1.92919,-2.52347,-0.845655,scratch closer,-2.7253,-1.23396,scratch closer,-1.92919,-2.52347,-0.845655,-2.7253,-1.23395,4.57864e-07,4.7851e-07,4.42826e-08,4.91392e-07,4.23019e-07,comparison,null,null,null,null,null,null,null,null,null
102
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Plasmablast (label),1.17513,1.50676,0.236232,0.593892,-0.35766,-1.02356,0.504187,not significant,-1.09183,0.395599,not significant,-0.35766,-1.02356,0.504187,-1.09183,0.395599,3.91799e-07,1.42348e-07,2.44983e-07,2.25384e-07,5.13912e-08,comparison,null,null,null,null,null,null,null,null,null
103
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Plasmablast (markers),0.734132,0.781626,0.444398,0.352954,0.0914443,-0.781805,0.429589,not significant,-0.436432,0.56391,not significant,0.091444,-0.781805,0.429589,-0.436432,0.56391,2.50217e-07,2.88455e-08,4.73926e-07,2.86819e-07,2.14481e-07,comparison,null,null,null,null,null,null,null,null,null
104
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,MS1 monocyte (IL1R2+),0.4621,0.0838364,1.11191,3.5713,-2.45939,-3.82759,-1.00351,scratch closer,-3.82759,-1.00351,scratch closer,-2.45939,-3.82759,-1.00351,-3.82759,-1.00351,1.33254e-07,1.62123e-07,6.55838e-08,1.62123e-07,6.55838e-08,comparison,null,null,null,null,null,null,null,null,null
105
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Cycling monocyte (Ye 2026),0.0869464,0.0934457,3.4769,3.39492,0.0819822,-1.13966,0.939323,not significant,-1.04728,0.991697,not significant,0.081982,-1.13966,0.939323,-1.04728,0.991697,2.3821e-07,2.67959e-08,3.53385e-07,4.54055e-07,4.35626e-07,comparison,null,null,null,null,null,null,null,null,null
106
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,ISG-high monocyte (positive control),0.263355,2.62664,1.91846,1.39332,0.525138,-1.79132,2.01646,not significant,-1.99226,1.93327,not significant,0.525138,-1.79132,2.01646,-1.99226,1.93327,3.78467e-07,1.54507e-07,3.07313e-07,3.21951e-07,4.77779e-07,comparison,null,null,null,null,null,null,null,null,null
107
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,ISG-high T,0.183512,2.70515,2.42462,1.44054,0.984085,-0.500624,2.31419,not significant,-0.588365,2.26523,not significant,0.984085,-0.500624,2.31419,-0.588365,2.26523,2.49826e-07,4.07786e-07,1.7528e-07,2.85494e-07,4.56614e-07,comparison,null,null,null,null,null,null,null,null,null
108
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,DN2 / ABC B,0.459289,1.26791,1.11463,0.345706,0.768926,-0.770734,1.60974,not significant,-0.626407,1.71303,not significant,0.768926,-0.770734,1.60974,-0.626407,1.71303,3.39039e-07,4.11318e-07,8.51992e-08,2.06464e-07,4.75172e-07,comparison,null,null,null,null,null,null,null,null,null
109
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,HSPC,0.955911,0.88238,0.0418155,0.151057,-0.109241,-0.907912,0.548876,not significant,-1.06025,0.470072,not significant,-0.109241,-0.907912,0.548876,-1.06025,0.470072,2.42565e-07,1.27016e-07,1.41559e-07,2.77342e-07,1.29571e-07,comparison,null,null,null,null,null,null,null,null,null
110
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Cytotoxic CD4 T,1.18755,0.467215,0.252604,1.06247,-0.80987,-1.71992,0.412218,not significant,-1.8186,0.22939,not significant,-0.80987,-1.71992,0.412218,-1.8186,0.22939,2.65297e-07,3.18796e-07,1.58361e-07,4.06224e-07,4.80258e-07,comparison,null,null,null,null,null,null,null,null,null
111
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Granulocyte-like (LDG),0.0585732,0.139565,4.07852,2.831,1.24752,0.559523,2.10093,pretrained closer,0.405051,1.94685,pretrained closer,1.24752,0.559523,2.10093,0.405051,1.94685,1.16954e-07,6.88678e-08,8.28538e-08,4.90235e-07,1.50021e-07,comparison,null,null,null,null,null,null,null,null,null
112
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,Platelet signal in monocytes (negative control),0.445627,0.359741,1.16369,1.47313,-0.309443,-0.943299,0.284428,not significant,-0.930369,0.287778,not significant,-0.309443,-0.943299,0.284428,-0.930369,0.287778,8.71073e-08,2.72764e-07,1.67553e-07,8.43132e-08,3.75634e-07,comparison,null,null,null,null,null,null,null,null,null
113
+ V0_published,ref: scratch 58 + recipes vs zero-shot,scratch_recipe__raw,zs__raw,AGGREGATE,null,null,1.3059,1.76259,-0.456689,-0.72933,-0.23849,scratch closer,-0.747601,-0.250533,scratch closer,-0.456689,-0.72933,-0.23849,-0.747601,-0.250533,1.5554e-07,2.35541e-07,4.51116e-07,3.31437e-07,3.77924e-07,comparison,null,null,null,null,null,null,null,null,null
114
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.024986,-5.2643,-6.64191,-4.14455,12,9506,1590,31471
115
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,2.51667,1.33804,0.584382,2.06814,69,10614,185,71619
116
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.64599,-0.610712,-1.47842,0.102048,33,8631,362,61162
117
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,3.87832,1.95677,1.07021,2.66345,243,8631,444,61162
118
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,1.50676,0.593892,-0.985746,1.54195,209,25500,716,131629
119
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.781626,-0.352954,-1.54071,0.473293,245,25500,1618,131629
120
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.0838364,-3.5713,-4.48247,-2.81489,141,9506,5568,31471
121
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.0934457,-3.39492,-4.16021,-2.7151,28,9506,992,31471
122
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,2.62664,1.39332,0.741479,2.52592,1513,9506,1907,31471
123
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,2.70515,1.44054,0.465424,2.31209,92,8631,241,61162
124
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,1.26791,0.345706,-0.526034,1.22215,162,4425,607,21022
125
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.88238,-0.151057,-1.22283,0.701139,20,25500,117,131629
126
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.467215,-1.06247,-1.9085,-0.235439,19,3484,342,29300
127
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.139565,-2.831,-3.73606,-1.63187,70,25500,2589,131629
128
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,0.359741,-1.47313,-1.89597,-1.01944,350,9506,3221,31471
129
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,zs__raw,null,1.76259,null,null,null,null,null,null
130
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,1.07489,0.105405,-0.667976,0.901633,447,7183,1822,31471
131
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,1.15404,0.215779,-0.528943,0.874021,62,13360,288,71619
132
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.443262,-1.16305,-1.83233,-0.542582,61,12396,679,61162
133
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,2.48923,1.31729,0.83529,1.82637,224,12396,444,61162
134
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,1.87444,0.908225,0.231119,1.61278,260,25500,716,131629
135
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.503011,-0.989379,-1.71644,-0.348245,332,25500,3407,131629
136
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.151909,-2.71603,-3.37199,-2.03574,259,7183,7470,31471
137
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.111874,-3.1438,-4.03227,-2.24018,43,7183,1684,31471
138
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.324813,-1.62017,-2.9089,-0.709971,311,7183,4195,31471
139
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.456853,-1.12204,-2.40886,-0.456573,80,12396,864,61162
140
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,1.10691,0.14983,-0.629626,0.994021,173,3997,822,21022
141
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.958643,-0.0385976,-1.14191,0.89029,26,25500,140,131629
142
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,1.79338,0.845409,0.493739,1.28761,161,6369,413,29300
143
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.0545427,-4.18227,-4.70353,-3.69727,50,25500,4732,131629
144
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,0.835598,-0.258647,-0.724564,0.136284,1237,7183,6486,31471
145
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_n5__raw,null,1.29978,null,null,null,null,null,null
146
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,1.00515,0.00902101,-0.837466,1.00068,357,6241,1791,31471
147
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.50825,-0.956525,-1.91797,-0.220033,32,15657,288,71619
148
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.403693,-1.29795,-1.98734,-0.727398,61,13611,679,61162
149
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,1.36629,0.453972,-0.02999,0.927169,135,13611,444,61162
150
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,1.12466,0.173104,-0.334492,0.84186,156,25500,716,131629
151
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.349986,-1.51172,-1.82424,-1.17852,231,25500,3407,131629
152
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.0956144,-3.38151,-4.17323,-2.06952,138,6241,7278,31471
153
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.0613772,-3.98914,-5.28835,-2.73936,19,6241,1561,31471
154
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.324734,-1.61993,-2.52596,-0.439487,246,6241,3820,31471
155
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.145625,-2.75497,-3.91439,-1.70039,28,13611,864,61162
156
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,1.63464,0.711969,-0.122247,1.56931,186,2910,822,21022
157
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.479321,-1.01163,-2.23465,-0.102715,13,25500,140,131629
158
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,1.51594,0.603001,-0.364983,1.71222,159,7441,413,29300
159
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.128721,-2.95174,-3.95759,-2.10234,118,25500,4732,131629
160
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,0.59832,-0.740113,-0.95978,-0.436119,708,6241,5967,31471
161
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_n5__raw,null,1.52356,null,null,null,null,null,null
162
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,1.05336,0.0777622,-1.08255,0.710178,227,3891,1743,31471
163
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.931543,-0.0922794,-0.857195,0.498559,57,15651,280,71619
164
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.408872,-1.27962,-2.11554,-0.576237,61,14147,645,61162
165
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,1.48979,0.578195,0.129551,1.09179,153,14147,444,61162
166
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,3.47492,1.79747,-0.355858,2.88727,482,25500,716,131629
167
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,1.0399,0.0573868,-1.70831,1.10553,609,25500,3023,131629
168
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.205964,-2.27559,-2.94372,-1.21484,178,3891,6990,31471
169
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.0895574,-3.43715,-4.80889,-2.1478,16,3891,1445,31471
170
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.435961,-1.19397,-2.02923,-0.434072,181,3891,3358,31471
171
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.373078,-1.4128,-2.41514,-0.938674,68,14147,788,61162
172
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.350657,-1.50187,-2.62076,-0.467248,66,4903,807,21022
173
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.573547,-0.760045,-2.34537,0.26364,15,25500,135,131629
174
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.895231,-0.152535,-0.523787,0.259398,81,6419,413,29300
175
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.0382542,-4.68604,-5.88952,-3.65348,32,25500,4318,131629
176
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,0.547251,-0.867875,-1.35106,-0.582466,363,3891,5365,31471
177
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_lora__raw,null,1.39298,null,null,null,null,null,null
178
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.916807,-0.122262,-1.03687,0.645356,208,4120,1733,31471
179
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,1.336,0.424763,-0.10666,0.911619,76,14815,275,71619
180
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.578323,-0.782009,-1.31379,-0.266172,78,13435,614,61162
181
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,1.84558,0.886455,0.451685,1.32788,180,13435,444,61162
182
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,3.28027,1.71439,0.515708,2.59076,455,25500,716,131629
183
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,1.15447,0.208107,-0.787329,0.988446,643,25500,2875,131629
184
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.361097,-1.46743,-2.06559,-0.536992,325,4120,6875,31471
185
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.113928,-3.10037,-4.07284,-1.75985,21,4120,1408,31471
186
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.576362,-0.792188,-2.01311,0.0530067,241,4120,3194,31471
187
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.449465,-1.14447,-2.37529,-0.581255,70,13435,709,61162
188
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.372326,-1.41678,-2.37679,-0.597522,76,5233,820,21022
189
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.782109,-0.324388,-1.25099,0.532384,20,25500,132,131629
190
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,1.32217,0.407641,0.144259,0.752566,111,5956,413,29300
191
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.0413254,-4.57531,-5.38056,-3.76675,33,25500,4122,131629
192
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,0.699329,-0.514552,-0.751907,-0.281933,466,4120,5090,31471
193
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,real_full__raw,null,1.27495,null,null,null,null,null,null
194
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.466973,-1.09221,-1.65707,-0.461875,106,4036,1770,31471
195
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.415901,-1.23973,-2.08403,-0.57661,25,15598,276,71619
196
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.314981,-1.65183,-2.287,-1.10078,45,13443,650,61162
197
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,1.12718,0.177643,-0.412281,0.753476,110,13443,444,61162
198
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,1.24001,0.313538,-0.563797,1.00298,172,25500,716,131629
199
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.642013,-0.637634,-1.31307,-0.0764329,373,25500,2999,131629
200
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.404617,-1.30354,-2.39296,-0.164114,372,4036,7169,31471
201
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.0867531,-3.48559,-4.58425,-2.24038,17,4036,1528,31471
202
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.306379,-1.70174,-2.31597,-0.747929,142,4036,3614,31471
203
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.169555,-2.53722,-3.56288,-1.52482,30,13443,805,61162
204
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.633688,-0.652851,-1.4366,0.187614,115,5053,755,21022
205
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,1.33828,0.435506,-0.457454,1.29799,35,25500,135,131629
206
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.800203,-0.313847,-0.745233,0.222188,76,6738,413,29300
207
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.0430958,-4.51658,-5.51293,-3.55197,36,25500,4312,131629
208
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,0.392348,-1.3474,-1.71325,-0.932734,286,4036,5684,31471
209
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_full__raw,null,1.41213,null,null,null,null,null,null
210
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.625773,-0.671411,-1.48383,0.179839,136,3965,1725,31471
211
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.987329,-0.00844623,-0.577938,0.568275,57,15201,272,71619
212
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.45704,-1.1197,-1.61857,-0.580631,65,13851,628,61162
213
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,1.76032,0.818281,0.481592,1.24403,177,13851,444,61162
214
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,2.29979,1.20276,-0.02018,2.08906,319,25500,716,131629
215
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.710737,-0.4911,-1.56166,0.378533,411,25500,2985,131629
216
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.301019,-1.72942,-2.38713,-0.927587,261,3965,6882,31471
217
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.0962428,-3.33587,-4.26742,-2.07053,17,3965,1402,31471
218
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.597133,-0.741134,-1.94299,0.0994629,243,3965,3230,31471
219
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.532931,-0.901032,-2.07611,-0.349614,91,13851,754,61162
220
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.28267,-1.81109,-2.67933,-0.986787,57,5157,822,21022
221
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.710699,-0.460432,-2.01534,0.603953,19,25500,138,131629
222
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,1.23372,0.307867,-0.0355085,0.659786,109,6268,413,29300
223
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.0252858,-5.27175,-6.23636,-4.3069,21,25500,4287,131629
224
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,0.544771,-0.874366,-1.18194,-0.609566,351,3965,5114,31471
225
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,lora_recipe__raw,null,1.39455,null,null,null,null,null,null
226
+ null,null,null,null,C1Q-high monocyte (reference),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.5325,-0.90289,-1.44654,-0.306035,108,3598,1774,31471
227
+ null,null,null,null,Cycling T/NK,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.479032,-1.0398,-1.7248,-0.439756,29,15999,271,71619
228
+ null,null,null,null,Cycling activated T (CD38/HLA-DR),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.278936,-1.82478,-2.71229,-1.14285,39,13815,619,61162
229
+ null,null,null,null,Proliferating T (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.977178,-0.0275878,-0.514541,0.412879,98,13815,444,61162
230
+ null,null,null,null,Plasmablast (label),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,1.17513,0.236232,-0.573844,0.985233,163,25500,716,131629
231
+ null,null,null,null,Plasmablast (markers),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.734132,-0.444398,-0.972917,0.0764115,415,25500,2918,131629
232
+ null,null,null,null,MS1 monocyte (IL1R2+),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.4621,-1.11191,-2.22958,0.064645,377,3598,7136,31471
233
+ null,null,null,null,Cycling monocyte (Ye 2026),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.0869464,-3.4769,-4.3906,-2.26309,15,3598,1509,31471
234
+ null,null,null,null,ISG-high monocyte (positive control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.263355,-1.91846,-2.905,-0.534162,108,3598,3587,31471
235
+ null,null,null,null,ISG-high T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.183512,-2.42462,-3.17663,-1.561,32,13815,772,61162
236
+ null,null,null,null,DN2 / ABC B,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.459289,-1.11463,-1.88806,-0.341277,81,5051,734,21022
237
+ null,null,null,null,HSPC,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.955911,-0.0418155,-0.845721,0.70544,25,25500,135,131629
238
+ null,null,null,null,Cytotoxic CD4 T,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,1.18755,0.252604,-0.246972,0.841812,113,6800,410,29300
239
+ null,null,null,null,Granulocyte-like (LDG),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.0585732,-4.07852,-5.15709,-3.08036,47,25500,4142,131629
240
+ null,null,null,null,Platelet signal in monocytes (negative control),null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,0.445627,-1.16369,-1.66451,-0.701818,285,3598,5594,31471
241
+ null,null,null,null,MEAN |log2| over 13 rare states,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,null,arm,scratch_recipe__raw,null,1.3059,null,null,null,null,null,null
paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_spearman.csv ADDED
@@ -0,0 +1,125 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ arm,state,spearman,ceiling_mean,ceiling_ci_lo,ceiling_ci_hi,ceiling_sd,spearman_over_ceiling,spearman_within_sepsis_only,median_gen_state_cells_per_donor,diff_ci_lo,diff_ci_hi,diff_ci90_lo,diff_ci90_hi,mean_spearman_scratch,mean_spearman_pretrained,mean_ceiling_scratch,mean_ceiling_pretrained,mean_within_sepsis_scratch,mean_within_sepsis_pretrained,n_states_sig,n_states_pretrained_higher
2
+ zs__raw,C1Q-high monocyte (reference),0.315467,0.612327,0.257438,0.835807,0.155739,0.515194,0.520057,0,null,null,null,null,null,null,null,null,null,null,null,null
3
+ zs__raw,Cycling T/NK,0.244022,0.751032,0.484007,0.922509,0.107772,0.324916,0.0629371,3,null,null,null,null,null,null,null,null,null,null,null,null
4
+ zs__raw,Cycling activated T (CD38/HLA-DR),-0.196561,0.508435,0.163971,0.8111,0.177736,-0.3866,-0.483363,1,null,null,null,null,null,null,null,null,null,null,null,null
5
+ zs__raw,Proliferating T (label),0.286765,0.895634,0.75,0.968137,0.057702,0.320181,0.58042,7,null,null,null,null,null,null,null,null,null,null,null,null
6
+ zs__raw,Plasmablast (label),0.161506,0.953231,0.903041,0.98713,0.0216609,0.16943,-0.0355928,4,null,null,null,null,null,null,null,null,null,null,null,null
7
+ zs__raw,Plasmablast (markers),0.249856,0.899451,0.797515,0.969919,0.0449881,0.277788,0.0456143,6,null,null,null,null,null,null,null,null,null,null,null,null
8
+ zs__raw,MS1 monocyte (IL1R2+),0.790422,0.91606,0.837566,0.949838,0.0283835,0.862849,0.879143,1,null,null,null,null,null,null,null,null,null,null,null,null
9
+ zs__raw,Cycling monocyte (Ye 2026),0.387466,0.672961,0.403364,0.846586,0.115104,0.575762,0.406064,0,null,null,null,null,null,null,null,null,null,null,null,null
10
+ zs__raw,ISG-high monocyte (positive control),0.20098,0.963196,0.933824,0.982804,0.0141884,0.20866,0.216783,64,null,null,null,null,null,null,null,null,null,null,null,null
11
+ zs__raw,ISG-high T,-0.123307,0.941294,0.883305,0.977851,0.0243352,-0.130997,0.154933,3,null,null,null,null,null,null,null,null,null,null,null,null
12
+ zs__raw,DN2 / ABC B,-0.0686275,0.904131,0.793759,0.969424,0.0475687,-0.0759043,-0.216783,9,null,null,null,null,null,null,null,null,null,null,null,null
13
+ zs__raw,HSPC,0.427994,0.703855,0.442782,0.895708,0.119013,0.608071,0.350617,1,null,null,null,null,null,null,null,null,null,null,null,null
14
+ zs__raw,Cytotoxic CD4 T,0.262661,0.570019,0.228999,0.824264,0.157326,0.460793,0.007798,1,null,null,null,null,null,null,null,null,null,null,null,null
15
+ zs__raw,Granulocyte-like (LDG),0.259428,0.873172,0.750524,0.957619,0.0568329,0.29711,0.219094,4,null,null,null,null,null,null,null,null,null,null,null,null
16
+ zs__raw,Platelet signal in monocytes (negative control),0.247549,0.841078,0.570419,0.962071,0.115248,0.294324,0.13986,18,null,null,null,null,null,null,null,null,null,null,null,null
17
+ lora_n5__raw,C1Q-high monocyte (reference),0.152335,0.94879,0.874877,0.986581,0.0289706,0.160557,0.297724,16,null,null,null,null,null,null,null,null,null,null,null,null
18
+ lora_n5__raw,Cycling T/NK,0.178922,0.699745,0.404408,0.896017,0.127554,0.255696,0.111888,4,null,null,null,null,null,null,null,null,null,null,null,null
19
+ lora_n5__raw,Cycling activated T (CD38/HLA-DR),-0.245701,0.672888,0.349613,0.875721,0.138997,-0.365144,-0.33275,3,null,null,null,null,null,null,null,null,null,null,null,null
20
+ lora_n5__raw,Proliferating T (label),0.465686,0.894189,0.789216,0.971875,0.0465944,0.520792,0.566434,12,null,null,null,null,null,null,null,null,null,null,null,null
21
+ lora_n5__raw,Plasmablast (label),0.275865,0.961526,0.92297,0.988663,0.0179034,0.286904,0.0530065,12,null,null,null,null,null,null,null,null,null,null,null,null
22
+ lora_n5__raw,Plasmablast (markers),0.100737,0.905727,0.799196,0.967979,0.0434223,0.111223,-0.133806,15,null,null,null,null,null,null,null,null,null,null,null,null
23
+ lora_n5__raw,MS1 monocyte (IL1R2+),0.83784,0.932863,0.877,0.976421,0.0265493,0.898139,0.825175,4,null,null,null,null,null,null,null,null,null,null,null,null
24
+ lora_n5__raw,Cycling monocyte (Ye 2026),0.219214,0.672226,0.413312,0.871551,0.114493,0.326101,0.0854228,2,null,null,null,null,null,null,null,null,null,null,null,null
25
+ lora_n5__raw,ISG-high monocyte (positive control),-0.0919681,0.923306,0.837674,0.98409,0.0419686,-0.0996074,-0.013986,8,null,null,null,null,null,null,null,null,null,null,null,null
26
+ lora_n5__raw,ISG-high T,0.146826,0.88969,0.762866,0.968297,0.0543318,0.165031,0.412587,2,null,null,null,null,null,null,null,null,null,null,null,null
27
+ lora_n5__raw,DN2 / ABC B,0.375,0.927055,0.852819,0.97549,0.0341432,0.404507,0.454545,9,null,null,null,null,null,null,null,null,null,null,null,null
28
+ lora_n5__raw,HSPC,0.102639,0.717808,0.448893,0.909281,0.12325,0.14299,0.0754313,1,null,null,null,null,null,null,null,null,null,null,null,null
29
+ lora_n5__raw,Cytotoxic CD4 T,0.742647,0.908971,0.808356,0.97241,0.0443619,0.817019,0.559441,6,null,null,null,null,null,null,null,null,null,null,null,null
30
+ lora_n5__raw,Granulocyte-like (LDG),0.488552,0.848591,0.684632,0.945599,0.0665884,0.575722,0.544974,2,null,null,null,null,null,null,null,null,null,null,null,null
31
+ lora_n5__raw,Platelet signal in monocytes (negative control),0.218137,0.94873,0.871262,0.985294,0.0297831,0.229925,0.034965,61,null,null,null,null,null,null,null,null,null,null,null,null
32
+ scratch_n5__raw,C1Q-high monocyte (reference),0.409314,0.950497,0.896936,0.985294,0.0224083,0.430631,0.545455,14,null,null,null,null,null,null,null,null,null,null,null,null
33
+ scratch_n5__raw,Cycling T/NK,-0.107277,0.641958,0.358073,0.868905,0.134996,-0.167109,-0.105636,1,null,null,null,null,null,null,null,null,null,null,null,null
34
+ scratch_n5__raw,Cycling activated T (CD38/HLA-DR),-0.54902,0.699043,0.40674,0.892157,0.124278,-0.785387,-0.629371,3,null,null,null,null,null,null,null,null,null,null,null,null
35
+ scratch_n5__raw,Proliferating T (label),0.431373,0.863965,0.703431,0.958333,0.0663055,0.499294,0.426573,7,null,null,null,null,null,null,null,null,null,null,null,null
36
+ scratch_n5__raw,Plasmablast (label),0.38619,0.942872,0.882232,0.982835,0.0247581,0.409589,0.383134,9,null,null,null,null,null,null,null,null,null,null,null,null
37
+ scratch_n5__raw,Plasmablast (markers),0.42205,0.869689,0.736074,0.955756,0.0556583,0.485289,0.499128,13,null,null,null,null,null,null,null,null,null,null,null,null
38
+ scratch_n5__raw,MS1 monocyte (IL1R2+),0.781863,0.940493,0.885766,0.97782,0.0240077,0.831333,0.552448,9,null,null,null,null,null,null,null,null,null,null,null,null
39
+ scratch_n5__raw,Cycling monocyte (Ye 2026),0.177777,0.643773,0.312091,0.843571,0.133488,0.276149,0.224785,1,null,null,null,null,null,null,null,null,null,null,null,null
40
+ scratch_n5__raw,ISG-high monocyte (positive control),-0.218137,0.936151,0.867283,0.982804,0.031125,-0.233015,-0.0699301,11,null,null,null,null,null,null,null,null,null,null,null,null
41
+ scratch_n5__raw,ISG-high T,0.00737103,0.773595,0.556272,0.914045,0.0956091,0.00952828,0.0281697,1,null,null,null,null,null,null,null,null,null,null,null,null
42
+ scratch_n5__raw,DN2 / ABC B,0.32598,0.94359,0.891157,0.982843,0.0243613,0.345468,0.356643,10,null,null,null,null,null,null,null,null,null,null,null,null
43
+ scratch_n5__raw,HSPC,0.134742,0.591769,0.209108,0.848957,0.161294,0.227694,-0.0197104,0,null,null,null,null,null,null,null,null,null,null,null,null
44
+ scratch_n5__raw,Cytotoxic CD4 T,-0.394608,0.915224,0.833945,0.976041,0.0385236,-0.43116,-0.0559441,8,null,null,null,null,null,null,null,null,null,null,null,null
45
+ scratch_n5__raw,Granulocyte-like (LDG),0.403464,0.923548,0.839378,0.976605,0.0357441,0.436863,0.456143,4,null,null,null,null,null,null,null,null,null,null,null,null
46
+ scratch_n5__raw,Platelet signal in monocytes (negative control),-0.375,0.93935,0.873713,0.982843,0.0278479,-0.399212,-0.363636,40,null,null,null,null,null,null,null,null,null,null,null,null
47
+ real_lora__raw,C1Q-high monocyte (reference),0.490761,0.875148,0.772059,0.965686,0.0511895,0.560775,0.602453,4,null,null,null,null,null,null,null,null,null,null,null,null
48
+ real_lora__raw,Cycling T/NK,0.181484,0.706648,0.412171,0.916571,0.132354,0.256823,0.164624,2,null,null,null,null,null,null,null,null,null,null,null,null
49
+ real_lora__raw,Cycling activated T (CD38/HLA-DR),-0.27451,0.675236,0.368811,0.873836,0.136346,-0.406539,-0.391608,2,null,null,null,null,null,null,null,null,null,null,null,null
50
+ real_lora__raw,Proliferating T (label),0.485294,0.868536,0.749877,0.958333,0.0575902,0.558749,0.58042,9,null,null,null,null,null,null,null,null,null,null,null,null
51
+ real_lora__raw,Plasmablast (label),0.0135386,0.972699,0.936769,0.992639,0.0135615,0.0139186,-0.0421798,8,null,null,null,null,null,null,null,null,null,null,null,null
52
+ real_lora__raw,Plasmablast (markers),0.12285,0.939847,0.87431,0.982527,0.0285615,0.130713,0.140105,12,null,null,null,null,null,null,null,null,null,null,null,null
53
+ real_lora__raw,MS1 monocyte (IL1R2+),0.811359,0.899899,0.804328,0.965335,0.0414979,0.901611,0.734266,6,null,null,null,null,null,null,null,null,null,null,null,null
54
+ real_lora__raw,Cycling monocyte (Ye 2026),-0.357115,0.528435,0.111958,0.802902,0.173959,-0.675797,-0.577052,1,null,null,null,null,null,null,null,null,null,null,null,null
55
+ real_lora__raw,ISG-high monocyte (positive control),0.69042,0.890753,0.778169,0.95423,0.0453589,0.775097,0.676073,4,null,null,null,null,null,null,null,null,null,null,null,null
56
+ real_lora__raw,ISG-high T,0.71401,0.869135,0.74724,0.950814,0.0550319,0.821518,0.690501,1,null,null,null,null,null,null,null,null,null,null,null,null
57
+ real_lora__raw,DN2 / ABC B,0.375,0.804703,0.546402,0.933513,0.100273,0.466011,0.370629,3,null,null,null,null,null,null,null,null,null,null,null,null
58
+ real_lora__raw,HSPC,0.237823,0.621811,0.291173,0.863523,0.157769,0.382468,0.195123,0,null,null,null,null,null,null,null,null,null,null,null,null
59
+ real_lora__raw,Cytotoxic CD4 T,0.761673,0.861879,0.717542,0.952207,0.0604399,0.883736,0.563924,2,null,null,null,null,null,null,null,null,null,null,null,null
60
+ real_lora__raw,Granulocyte-like (LDG),0.250709,0.793175,0.602184,0.922671,0.0850621,0.316083,0.292251,1,null,null,null,null,null,null,null,null,null,null,null,null
61
+ real_lora__raw,Platelet signal in monocytes (negative control),0.00490196,0.859736,0.705882,0.954382,0.0695367,0.00570171,-0.202797,9,null,null,null,null,null,null,null,null,null,null,null,null
62
+ real_full__raw,C1Q-high monocyte (reference),0.568976,0.908259,0.792831,0.977941,0.0468693,0.626447,0.657343,6,null,null,null,null,null,null,null,null,null,null,null,null
63
+ real_full__raw,Cycling T/NK,0.465686,0.77624,0.551471,0.926593,0.0975702,0.599926,0.573427,4,null,null,null,null,null,null,null,null,null,null,null,null
64
+ real_full__raw,Cycling activated T (CD38/HLA-DR),0.0147059,0.713871,0.411833,0.894608,0.128096,0.0206002,-0.118881,4,null,null,null,null,null,null,null,null,null,null,null,null
65
+ real_full__raw,Proliferating T (label),0.735294,0.88301,0.767157,0.957169,0.0526145,0.832713,0.811189,11,null,null,null,null,null,null,null,null,null,null,null,null
66
+ real_full__raw,Plasmablast (label),0.373006,0.973873,0.94506,0.993866,0.0130074,0.383014,0.101576,12,null,null,null,null,null,null,null,null,null,null,null,null
67
+ real_full__raw,Plasmablast (markers),0.0773482,0.941636,0.882766,0.981657,0.0262882,0.0821424,-0.256594,21,null,null,null,null,null,null,null,null,null,null,null,null
68
+ real_full__raw,MS1 monocyte (IL1R2+),0.909871,0.954085,0.903295,0.98865,0.0246493,0.953659,0.888112,10,null,null,null,null,null,null,null,null,null,null,null,null
69
+ real_full__raw,Cycling monocyte (Ye 2026),0.154134,0.500172,0.120508,0.79957,0.178669,0.308161,-0.269703,1,null,null,null,null,null,null,null,null,null,null,null,null
70
+ real_full__raw,ISG-high monocyte (positive control),0.367647,0.910879,0.813147,0.976068,0.0434046,0.403618,0.412587,6,null,null,null,null,null,null,null,null,null,null,null,null
71
+ real_full__raw,ISG-high T,0.448837,0.872484,0.734088,0.955774,0.0597028,0.514436,0.619734,2,null,null,null,null,null,null,null,null,null,null,null,null
72
+ real_full__raw,DN2 / ABC B,0.485294,0.803909,0.571245,0.940012,0.105777,0.603668,0.41958,4,null,null,null,null,null,null,null,null,null,null,null,null
73
+ real_full__raw,HSPC,0.0629722,0.672884,0.341908,0.888239,0.139913,0.0935855,-0.00377007,1,null,null,null,null,null,null,null,null,null,null,null,null
74
+ real_full__raw,Cytotoxic CD4 T,0.815727,0.892427,0.779493,0.967797,0.0483109,0.914055,0.728548,5,null,null,null,null,null,null,null,null,null,null,null,null
75
+ real_full__raw,Granulocyte-like (LDG),0.458021,0.787859,0.566048,0.931867,0.0928627,0.581349,0.571366,2,null,null,null,null,null,null,null,null,null,null,null,null
76
+ real_full__raw,Platelet signal in monocytes (negative control),0.171674,0.900762,0.753615,0.968137,0.0514441,0.190587,0.0455342,22,null,null,null,null,null,null,null,null,null,null,null,null
77
+ scratch_full__raw,C1Q-high monocyte (reference),0.508601,0.79685,0.661251,0.904857,0.0649685,0.638265,0.676008,4,null,null,null,null,null,null,null,null,null,null,null,null
78
+ scratch_full__raw,Cycling T/NK,-0.171229,0.572954,0.228207,0.842103,0.162066,-0.298853,0.0889821,1,null,null,null,null,null,null,null,null,null,null,null,null
79
+ scratch_full__raw,Cycling activated T (CD38/HLA-DR),-0.568627,0.628567,0.294942,0.863012,0.146556,-0.90464,-0.51049,2,null,null,null,null,null,null,null,null,null,null,null,null
80
+ scratch_full__raw,Proliferating T (label),0.487745,0.838845,0.674798,0.938725,0.067024,0.581449,0.58042,6,null,null,null,null,null,null,null,null,null,null,null,null
81
+ scratch_full__raw,Plasmablast (label),0.432004,0.946007,0.893002,0.98439,0.0239232,0.45666,0.514887,6,null,null,null,null,null,null,null,null,null,null,null,null
82
+ scratch_full__raw,Plasmablast (markers),0.199877,0.908493,0.813903,0.972111,0.0410374,0.22001,0.146853,18,null,null,null,null,null,null,null,null,null,null,null,null
83
+ scratch_full__raw,MS1 monocyte (IL1R2+),0.91355,0.939116,0.860208,0.987125,0.0339437,0.972777,0.867133,3,null,null,null,null,null,null,null,null,null,null,null,null
84
+ scratch_full__raw,Cycling monocyte (Ye 2026),0.190203,0.560766,0.198554,0.834264,0.166052,0.339184,0.138096,1,null,null,null,null,null,null,null,null,null,null,null,null
85
+ scratch_full__raw,ISG-high monocyte (positive control),0.645399,0.895586,0.787186,0.955409,0.0436617,0.720644,0.61053,7,null,null,null,null,null,null,null,null,null,null,null,null
86
+ scratch_full__raw,ISG-high T,0.411942,0.772997,0.509686,0.937721,0.108708,0.532916,0.413315,1,null,null,null,null,null,null,null,null,null,null,null,null
87
+ scratch_full__raw,DN2 / ABC B,0.490196,0.892807,0.745858,0.968137,0.0569809,0.54905,0.342657,6,null,null,null,null,null,null,null,null,null,null,null,null
88
+ scratch_full__raw,HSPC,-0.0680362,0.785443,0.591774,0.924853,0.0878867,-0.0866215,-0.150309,1,null,null,null,null,null,null,null,null,null,null,null,null
89
+ scratch_full__raw,Cytotoxic CD4 T,0.578431,0.879784,0.760266,0.965605,0.0530325,0.65747,0.293706,3,null,null,null,null,null,null,null,null,null,null,null,null
90
+ scratch_full__raw,Granulocyte-like (LDG),0.158444,0.804445,0.622373,0.935738,0.0819917,0.19696,0.115584,2,null,null,null,null,null,null,null,null,null,null,null,null
91
+ scratch_full__raw,Platelet signal in monocytes (negative control),0.54902,0.856369,0.698529,0.955882,0.068932,0.641102,0.552448,15,null,null,null,null,null,null,null,null,null,null,null,null
92
+ lora_recipe__raw,C1Q-high monocyte (reference),0.547913,0.867683,0.664216,0.958234,0.0752447,0.631467,0.690019,5,null,null,null,null,null,null,null,null,null,null,null,null
93
+ lora_recipe__raw,Cycling T/NK,0.389706,0.720473,0.433844,0.898346,0.122026,0.540903,0.328671,3,null,null,null,null,null,null,null,null,null,null,null,null
94
+ lora_recipe__raw,Cycling activated T (CD38/HLA-DR),0.0661765,0.689156,0.407051,0.886573,0.129261,0.0960253,-0.146853,3,null,null,null,null,null,null,null,null,null,null,null,null
95
+ lora_recipe__raw,Proliferating T (label),0.639706,0.877866,0.755944,0.963235,0.057621,0.728705,0.692308,9,null,null,null,null,null,null,null,null,null,null,null,null
96
+ lora_recipe__raw,Plasmablast (label),0.131531,0.966025,0.931246,0.990216,0.0156202,0.136157,-0.0982462,9,null,null,null,null,null,null,null,null,null,null,null,null
97
+ lora_recipe__raw,Plasmablast (markers),0.321473,0.912836,0.820616,0.973054,0.0397293,0.352169,0.242107,13,null,null,null,null,null,null,null,null,null,null,null,null
98
+ lora_recipe__raw,MS1 monocyte (IL1R2+),0.874696,0.925734,0.872605,0.974125,0.0271359,0.944867,0.895105,6,null,null,null,null,null,null,null,null,null,null,null,null
99
+ lora_recipe__raw,Cycling monocyte (Ye 2026),0.261804,0.483601,0.0727825,0.753484,0.17363,0.541363,0.131693,1,null,null,null,null,null,null,null,null,null,null,null,null
100
+ lora_recipe__raw,ISG-high monocyte (positive control),0.523343,0.894606,0.79322,0.952985,0.0443334,0.584999,0.500012,6,null,null,null,null,null,null,null,null,null,null,null,null
101
+ lora_recipe__raw,ISG-high T,0.526058,0.896417,0.783323,0.968062,0.0464311,0.586845,0.629371,1,null,null,null,null,null,null,null,null,null,null,null,null
102
+ lora_recipe__raw,DN2 / ABC B,0.39951,0.741825,0.489808,0.92523,0.122079,0.53855,0.34965,3,null,null,null,null,null,null,null,null,null,null,null,null
103
+ lora_recipe__raw,HSPC,-0.161023,0.66208,0.338464,0.87966,0.142296,-0.243208,-0.376337,0,null,null,null,null,null,null,null,null,null,null,null,null
104
+ lora_recipe__raw,Cytotoxic CD4 T,0.845211,0.891792,0.776211,0.967505,0.0498515,0.947768,0.739455,5,null,null,null,null,null,null,null,null,null,null,null,null
105
+ lora_recipe__raw,Granulocyte-like (LDG),0.33603,0.725691,0.457165,0.900988,0.112116,0.463048,0.434399,1,null,null,null,null,null,null,null,null,null,null,null,null
106
+ lora_recipe__raw,Platelet signal in monocytes (negative control),0.0637255,0.850462,0.661765,0.955882,0.0791545,0.0749304,-0.041958,17,null,null,null,null,null,null,null,null,null,null,null,null
107
+ scratch_recipe__raw,C1Q-high monocyte (reference),0.489678,0.761479,0.625283,0.852941,0.0567715,0.643061,0.281818,3,null,null,null,null,null,null,null,null,null,null,null,null
108
+ scratch_recipe__raw,Cycling T/NK,0.221952,0.60371,0.256604,0.862238,0.157357,0.367647,0.530333,1,null,null,null,null,null,null,null,null,null,null,null,null
109
+ scratch_recipe__raw,Cycling activated T (CD38/HLA-DR),-0.189893,0.591993,0.213121,0.843419,0.160856,-0.320768,-0.124575,2,null,null,null,null,null,null,null,null,null,null,null,null
110
+ scratch_recipe__raw,Proliferating T (label),0.620098,0.817302,0.644608,0.933824,0.0778978,0.758713,0.643357,4,null,null,null,null,null,null,null,null,null,null,null,null
111
+ scratch_recipe__raw,Plasmablast (label),0.16718,0.942742,0.883787,0.981878,0.0246899,0.177333,0.361406,6,null,null,null,null,null,null,null,null,null,null,null,null
112
+ scratch_recipe__raw,Plasmablast (markers),0.192994,0.9192,0.828025,0.977315,0.039631,0.209959,0.329827,23,null,null,null,null,null,null,null,null,null,null,null,null
113
+ scratch_recipe__raw,MS1 monocyte (IL1R2+),0.896759,0.917196,0.820707,0.982733,0.0436026,0.977718,0.745455,5,null,null,null,null,null,null,null,null,null,null,null,null
114
+ scratch_recipe__raw,Cycling monocyte (Ye 2026),-0.0328395,0.556004,0.148521,0.820035,0.161883,-0.0590633,0.125615,1,null,null,null,null,null,null,null,null,null,null,null,null
115
+ scratch_recipe__raw,ISG-high monocyte (positive control),0.312686,0.874623,0.733038,0.951771,0.0555171,0.357509,0.403687,3,null,null,null,null,null,null,null,null,null,null,null,null
116
+ scratch_recipe__raw,ISG-high T,0.441439,0.780914,0.525507,0.922607,0.101534,0.565284,0.551689,2,null,null,null,null,null,null,null,null,null,null,null,null
117
+ scratch_recipe__raw,DN2 / ABC B,0.594596,0.855139,0.665186,0.960784,0.0806172,0.695321,0.535225,4,null,null,null,null,null,null,null,null,null,null,null,null
118
+ scratch_recipe__raw,HSPC,0.382202,0.721323,0.462166,0.90064,0.112734,0.529862,0.663757,1,null,null,null,null,null,null,null,null,null,null,null,null
119
+ scratch_recipe__raw,Cytotoxic CD4 T,0.392157,0.89554,0.783569,0.970519,0.0493571,0.4379,0.125874,6,null,null,null,null,null,null,null,null,null,null,null,null
120
+ scratch_recipe__raw,Granulocyte-like (LDG),0.464206,0.834216,0.660536,0.945209,0.0730691,0.556457,0.513651,2,null,null,null,null,null,null,null,null,null,null,null,null
121
+ scratch_recipe__raw,Platelet signal in monocytes (negative control),0.129412,0.843566,0.610221,0.944118,0.0885392,0.15341,-0.0727273,9,null,null,null,null,null,null,null,null,null,null,null,null
122
+ DIFF pretrained - scratch | 5 pairs: scratch vs LoRA,MEAN over 13 rare,0.108565,0.0215425,null,null,null,null,null,null,-0.0799673,0.293607,-0.0494787,0.265312,0.186863,0.295428,0.823078,0.844621,0.204755,0.270775,1,9
123
+ DIFF pretrained - scratch | 58 pairs: scratch vs LoRA,MEAN over 13 rare,0.0192136,0.00692915,null,null,null,null,null,null,-0.12139,0.186036,-0.106426,0.154488,0.274085,0.293298,0.79439,0.801319,0.270526,0.25565,0,6
124
+ DIFF pretrained - scratch | 58 pairs: scratch vs full FT,MEAN over 13 rare,0.154367,0.0272027,null,null,null,null,null,null,-0.00821627,0.31307,0.013565,0.289248,0.274085,0.428452,0.79439,0.821593,0.270526,0.363225,1,8
125
+ DIFF pretrained - scratch | 58 pairs + recipes: scratch vs LoRA,MEAN over 13 rare,0.0414047,0.0126476,null,null,null,null,null,null,-0.105909,0.217255,-0.0888378,0.189811,0.356964,0.398368,0.784366,0.797014,0.406418,0.347026,0,8
paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_stateset.csv ADDED
@@ -0,0 +1,50 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ comparison,state_set,n_states,D,D_ci_lo,D_ci_hi,verdict,D_bc_ci_lo,D_bc_ci_hi,verdict_bc,states
2
+ 5 pairs: scratch vs LoRA,13 rare (claim),13,0.22378,-0.0780742,0.405503,not significant,0.00990003,0.45829,pretrained closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
3
+ 5 pairs: scratch vs LoRA,11 marker states (no label states),11,0.40978,-0.000510062,0.648639,not significant,0.123503,0.735847,pretrained closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
4
+ 5 pairs: scratch vs LoRA,drop states where both arms < 0.25x,10,0.262885,-0.0751171,0.481825,not significant,0.0136386,0.532092,pretrained closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
5
+ 5 pairs: scratch vs LoRA,drop LDG + cycling monocyte (dual failures),11,0.299484,-0.045352,0.491616,not significant,0.0544922,0.552947,pretrained closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
6
+ 5 pairs: scratch vs LoRA,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,0.238021,-0.0772466,0.487998,not significant,-0.0343505,0.513265,not significant,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
7
+ 5 pairs: scratch vs LoRA,"monocyte states (C1Q, MS1, cycling mono)",3,0.471478,-0.21785,1.0887,not significant,-0.220846,1.07931,not significant,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
8
+ 5 pairs: scratch vs LoRA,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,0.280568,-0.222658,0.727025,not significant,-0.192498,0.747805,not significant,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
9
+ 58 pairs: scratch vs LoRA,13 rare (claim),13,0.0191519,-0.349716,0.254627,not significant,-0.238393,0.379116,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
10
+ 58 pairs: scratch vs LoRA,11 marker states (no label states),11,0.193951,-0.231882,0.422058,not significant,-0.0336618,0.591127,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
11
+ 58 pairs: scratch vs LoRA,drop states where both arms < 0.25x,11,0.0336358,-0.325444,0.276738,not significant,-0.214495,0.397782,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
12
+ 58 pairs: scratch vs LoRA,drop LDG + cycling monocyte (dual failures),11,0.0336358,-0.325444,0.276738,not significant,-0.214495,0.397782,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
13
+ 58 pairs: scratch vs LoRA,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,0.00240076,-0.377095,0.357478,not significant,-0.338862,0.397398,not significant,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
14
+ 58 pairs: scratch vs LoRA,"monocyte states (C1Q, MS1, cycling mono)",3,0.0302781,-0.563224,0.409572,not significant,-0.449707,0.475459,not significant,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
15
+ 58 pairs: scratch vs LoRA,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,0.48097,0.0726597,0.879665,pretrained closer,0.162947,1.0255,pretrained closer,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
16
+ 58 pairs: scratch vs full FT,13 rare (claim),13,0.13718,-0.138205,0.406414,not significant,-0.128666,0.412582,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
17
+ 58 pairs: scratch vs full FT,11 marker states (no label states),11,0.353909,0.0154861,0.622283,pretrained closer,0.0753878,0.70018,pretrained closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
18
+ 58 pairs: scratch vs full FT,drop states where both arms < 0.25x,11,0.132441,-0.187842,0.441259,not significant,-0.170236,0.456995,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
19
+ 58 pairs: scratch vs full FT,drop LDG + cycling monocyte (dual failures),11,0.132441,-0.187842,0.441259,not significant,-0.170236,0.456995,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
20
+ 58 pairs: scratch vs full FT,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,0.120187,-0.212975,0.436647,not significant,-0.235699,0.422074,not significant,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
21
+ 58 pairs: scratch vs full FT,"monocyte states (C1Q, MS1, cycling mono)",3,0.397091,-0.0283168,0.749646,not significant,0.0491197,0.81661,pretrained closer,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
22
+ 58 pairs: scratch vs full FT,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,0.454987,0.00934501,1.02121,pretrained closer,0.0171417,1.04684,pretrained closer,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
23
+ 58 pairs + recipes: scratch vs LoRA,13 rare (claim),13,-0.0886499,-0.378816,0.177756,not significant,-0.396415,0.163818,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
24
+ 58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),11,0.0549791,-0.299751,0.313748,not significant,-0.256437,0.344678,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
25
+ 58 pairs + recipes: scratch vs LoRA,drop states where both arms < 0.25x,11,-0.00911396,-0.268507,0.264078,not significant,-0.281646,0.245187,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
26
+ 58 pairs + recipes: scratch vs LoRA,drop LDG + cycling monocyte (dual failures),11,-0.00911396,-0.268507,0.264078,not significant,-0.281646,0.245187,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
27
+ 58 pairs + recipes: scratch vs LoRA,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,-0.0668352,-0.455086,0.253019,not significant,-0.458739,0.25063,not significant,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
28
+ 58 pairs + recipes: scratch vs LoRA,"monocyte states (C1Q, MS1, cycling mono)",3,-0.081666,-0.711642,0.460817,not significant,-0.736034,0.418884,not significant,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
29
+ 58 pairs + recipes: scratch vs LoRA,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,0.482815,0.0118383,0.911473,pretrained closer,0.0516467,0.941041,pretrained closer,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
30
+ ref: scratch 5 pairs vs zero-shot,13 rare (claim),13,-0.239032,-0.514982,0.00500708,not significant,-0.507359,0.00809046,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
31
+ ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),11,-0.10762,-0.43853,0.167567,not significant,-0.428178,0.180105,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
32
+ ref: scratch 5 pairs vs zero-shot,drop states where both arms < 0.25x,10,-0.363258,-0.643668,-0.076832,scratch closer,-0.638748,-0.0692218,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
33
+ ref: scratch 5 pairs vs zero-shot,drop LDG + cycling monocyte (dual failures),11,-0.347488,-0.668613,-0.0744803,scratch closer,-0.648585,-0.0475015,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
34
+ ref: scratch 5 pairs vs zero-shot,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,-0.479021,-0.763795,-0.0970178,scratch closer,-0.824536,-0.145163,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
35
+ ref: scratch 5 pairs vs zero-shot,"monocyte states (C1Q, MS1, cycling mono)",3,-1.61695,-2.41515,-0.826394,scratch closer,-2.57189,-0.914182,scratch closer,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
36
+ ref: scratch 5 pairs vs zero-shot,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,-0.0684234,-0.427972,0.38731,not significant,-0.552636,0.305074,not significant,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
37
+ ref: scratch 58 pairs vs zero-shot,13 rare (claim),13,-0.350458,-0.660323,-0.128444,scratch closer,-0.61883,-0.10131,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
38
+ ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),11,-0.226951,-0.614423,0.0601622,not significant,-0.5462,0.105559,not significant,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
39
+ ref: scratch 58 pairs vs zero-shot,drop states where both arms < 0.25x,11,-0.575655,-0.899077,-0.343142,scratch closer,-0.83219,-0.277991,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
40
+ ref: scratch 58 pairs vs zero-shot,drop LDG + cycling monocyte (dual failures),11,-0.575655,-0.899077,-0.343142,scratch closer,-0.83219,-0.277991,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
41
+ ref: scratch 58 pairs vs zero-shot,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,-0.487452,-0.87279,-0.171755,scratch closer,-0.879117,-0.175765,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
42
+ ref: scratch 58 pairs vs zero-shot,"monocyte states (C1Q, MS1, cycling mono)",3,-2.11639,-3.00422,-1.31825,scratch closer,-2.94566,-1.27728,scratch closer,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
43
+ ref: scratch 58 pairs vs zero-shot,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,-0.097653,-0.502673,0.415315,not significant,-0.56666,0.332125,not significant,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
44
+ ref: scratch 58 + recipes vs zero-shot,13 rare (claim),13,-0.456689,-0.72933,-0.23849,scratch closer,-0.747601,-0.250533,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
45
+ ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),11,-0.331828,-0.682466,-0.0912668,scratch closer,-0.65254,-0.0669736,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Plasmablast (markers); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T; Granulocyte-like (LDG)
46
+ ref: scratch 58 + recipes vs zero-shot,drop states where both arms < 0.25x,11,-0.660588,-0.934273,-0.421214,scratch closer,-0.944133,-0.429716,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
47
+ ref: scratch 58 + recipes vs zero-shot,drop LDG + cycling monocyte (dual failures),11,-0.660588,-0.934273,-0.421214,scratch closer,-0.944133,-0.429716,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); Plasmablast (label); Plasmablast (markers); MS1 monocyte (IL1R2+); ISG-high T; DN2 / ABC B; HSPC; Cytotoxic CD4 T
48
+ ref: scratch 58 + recipes vs zero-shot,"non-redundant 9 (drop Cycling activated T, Plasmablast markers, Proliferating T label, HSPC)",9,-0.578227,-0.915774,-0.280575,scratch closer,-0.907295,-0.271165,scratch closer,C1Q-high monocyte (reference); Cycling T/NK; Plasmablast (label); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026); ISG-high T; DN2 / ABC B; Cytotoxic CD4 T; Granulocyte-like (LDG)
49
+ ref: scratch 58 + recipes vs zero-shot,"monocyte states (C1Q, MS1, cycling mono)",3,-2.24627,-3.212,-1.49279,scratch closer,-3.15702,-1.45252,scratch closer,C1Q-high monocyte (reference); MS1 monocyte (IL1R2+); Cycling monocyte (Ye 2026)
50
+ ref: scratch 58 + recipes vs zero-shot,"T/NK states (cycling T/NK, cycling act T, prolif T label, ISG-high T, cytotoxic CD4)",5,-0.167828,-0.466322,0.30154,not significant,-0.610621,0.156733,not significant,Cycling T/NK; Cycling activated T (CD38/HLA-DR); Proliferating T (label); ISG-high T; Cytotoxic CD4 T
paper-releases/pbisc-diffusion/updates/20261005T142225Z-rare-states-scratch-vs-pretrained/diffusion/dataset/server_1/model8/plans/rare_states_screen_20261004/out/scratch_vs_lora_20261005/verify_confound_within_stateset_by_scheme.csv ADDED
@@ -0,0 +1,148 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ scheme,comparison,state_set,D,D_ci_lo,D_ci_hi,verdict,D_bc_ci_lo,D_bc_ci_hi,verdict_bc
2
+ V0_published,5 pairs: scratch vs LoRA,13 rare,0.22378,-0.0780742,0.405503,not significant,0.00990003,0.45829,pretrained closer
3
+ V0_published,5 pairs: scratch vs LoRA,11 marker states (no label states),0.40978,-0.000510062,0.648639,not significant,0.123503,0.735847,pretrained closer
4
+ V0_published,5 pairs: scratch vs LoRA,T/NK states (5),0.280568,-0.222658,0.727025,not significant,-0.192498,0.747805,not significant
5
+ V0_published,58 pairs: scratch vs LoRA,13 rare,0.0191519,-0.349716,0.254627,not significant,-0.238393,0.379116,not significant
6
+ V0_published,58 pairs: scratch vs LoRA,11 marker states (no label states),0.193951,-0.231882,0.422058,not significant,-0.0336618,0.591127,not significant
7
+ V0_published,58 pairs: scratch vs LoRA,T/NK states (5),0.48097,0.0726597,0.879665,pretrained closer,0.162947,1.0255,pretrained closer
8
+ V0_published,58 pairs: scratch vs full FT,13 rare,0.13718,-0.138205,0.406414,not significant,-0.128666,0.412582,not significant
9
+ V0_published,58 pairs: scratch vs full FT,11 marker states (no label states),0.353909,0.0154861,0.622283,pretrained closer,0.0753878,0.70018,pretrained closer
10
+ V0_published,58 pairs: scratch vs full FT,T/NK states (5),0.454987,0.00934501,1.02121,pretrained closer,0.0171417,1.04684,pretrained closer
11
+ V0_published,58 pairs + recipes: scratch vs LoRA,13 rare,-0.0886499,-0.378816,0.177756,not significant,-0.396415,0.163818,not significant
12
+ V0_published,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),0.0549791,-0.299751,0.313748,not significant,-0.256437,0.344678,not significant
13
+ V0_published,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.482815,0.0118383,0.911473,pretrained closer,0.0516467,0.941041,pretrained closer
14
+ V0_published,ref: scratch 5 pairs vs zero-shot,13 rare,-0.239032,-0.514982,0.00500708,not significant,-0.507359,0.00809046,not significant
15
+ V0_published,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),-0.10762,-0.43853,0.167567,not significant,-0.428178,0.180105,not significant
16
+ V0_published,ref: scratch 5 pairs vs zero-shot,T/NK states (5),-0.0684234,-0.427972,0.38731,not significant,-0.552636,0.305074,not significant
17
+ V0_published,ref: scratch 58 pairs vs zero-shot,13 rare,-0.350458,-0.660323,-0.128444,scratch closer,-0.61883,-0.10131,scratch closer
18
+ V0_published,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.226951,-0.614423,0.0601622,not significant,-0.5462,0.105559,not significant
19
+ V0_published,ref: scratch 58 pairs vs zero-shot,T/NK states (5),-0.097653,-0.502673,0.415315,not significant,-0.56666,0.332125,not significant
20
+ V0_published,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.456689,-0.72933,-0.23849,scratch closer,-0.747601,-0.250533,scratch closer
21
+ V0_published,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.331828,-0.682466,-0.0912668,scratch closer,-0.65254,-0.0669736,scratch closer
22
+ V0_published,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.167828,-0.466322,0.30154,not significant,-0.610621,0.156733,not significant
23
+ V0_reseed,5 pairs: scratch vs LoRA,13 rare,0.223932,-0.0791335,0.404775,not significant,0.00943461,0.458725,pretrained closer
24
+ V0_reseed,5 pairs: scratch vs LoRA,11 marker states (no label states),0.40996,-0.00461502,0.648028,not significant,0.123126,0.735213,pretrained closer
25
+ V0_reseed,5 pairs: scratch vs LoRA,T/NK states (5),0.280568,-0.222658,0.727025,not significant,-0.192498,0.747805,not significant
26
+ V0_reseed,58 pairs: scratch vs LoRA,13 rare,0.0227069,-0.349044,0.254557,not significant,-0.236025,0.385827,not significant
27
+ V0_reseed,58 pairs: scratch vs LoRA,11 marker states (no label states),0.198152,-0.234086,0.427908,not significant,-0.025396,0.610517,not significant
28
+ V0_reseed,58 pairs: scratch vs LoRA,T/NK states (5),0.50112,0.0842524,0.900205,pretrained closer,0.178551,1.08059,pretrained closer
29
+ V0_reseed,58 pairs: scratch vs full FT,13 rare,0.132019,-0.140134,0.400985,not significant,-0.13889,0.401023,not significant
30
+ V0_reseed,58 pairs: scratch vs full FT,11 marker states (no label states),0.347811,0.0181601,0.614998,pretrained closer,0.0710333,0.674513,pretrained closer
31
+ V0_reseed,58 pairs: scratch vs full FT,T/NK states (5),0.452425,0.0146208,1.01651,pretrained closer,0.0231438,1.03641,pretrained closer
32
+ V0_reseed,58 pairs + recipes: scratch vs LoRA,13 rare,-0.0923558,-0.370013,0.172974,not significant,-0.394234,0.156143,not significant
33
+ V0_reseed,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),0.0505993,-0.29491,0.31211,not significant,-0.256908,0.337729,not significant
34
+ V0_reseed,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.475644,0.0228828,0.898506,pretrained closer,0.0524964,0.925093,pretrained closer
35
+ V0_reseed,ref: scratch 5 pairs vs zero-shot,13 rare,-0.238006,-0.514845,0.011212,not significant,-0.518514,0.00960343,not significant
36
+ V0_reseed,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),-0.106407,-0.448736,0.181472,not significant,-0.446922,0.181596,not significant
37
+ V0_reseed,ref: scratch 5 pairs vs zero-shot,T/NK states (5),-0.0389716,-0.435641,0.437392,not significant,-0.537134,0.361353,not significant
38
+ V0_reseed,ref: scratch 58 pairs vs zero-shot,13 rare,-0.351244,-0.666625,-0.112452,scratch closer,-0.639468,-0.0990644,scratch closer
39
+ V0_reseed,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.22788,-0.626918,0.0779136,not significant,-0.580199,0.104432,not significant
40
+ V0_reseed,ref: scratch 58 pairs vs zero-shot,T/NK states (5),-0.0679619,-0.502354,0.474179,not significant,-0.561409,0.386867,not significant
41
+ V0_reseed,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.45206,-0.729237,-0.231524,scratch closer,-0.755907,-0.243394,scratch closer
42
+ V0_reseed,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.326357,-0.678125,-0.0700701,scratch closer,-0.666226,-0.0581052,scratch closer
43
+ V0_reseed,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.131215,-0.445563,0.346854,not significant,-0.60946,0.220236,not significant
44
+ V1_lib_trained,5 pairs: scratch vs LoRA,13 rare,0.0956512,-0.226448,0.344623,not significant,-0.204854,0.357682,not significant
45
+ V1_lib_trained,5 pairs: scratch vs LoRA,11 marker states (no label states),0.258355,-0.167953,0.578157,not significant,-0.13307,0.600555,not significant
46
+ V1_lib_trained,5 pairs: scratch vs LoRA,T/NK states (5),0.217774,-0.267863,0.6267,not significant,-0.204971,0.689297,not significant
47
+ V1_lib_trained,58 pairs: scratch vs LoRA,13 rare,0.0200065,-0.362532,0.256794,not significant,-0.24395,0.367268,not significant
48
+ V1_lib_trained,58 pairs: scratch vs LoRA,11 marker states (no label states),0.194961,-0.234728,0.405639,not significant,-0.022651,0.595355,not significant
49
+ V1_lib_trained,58 pairs: scratch vs LoRA,T/NK states (5),0.513785,0.118049,0.900882,pretrained closer,0.206975,1.05794,pretrained closer
50
+ V1_lib_trained,58 pairs: scratch vs full FT,13 rare,0.160169,-0.126784,0.427422,not significant,-0.121995,0.431479,not significant
51
+ V1_lib_trained,58 pairs: scratch vs full FT,11 marker states (no label states),0.381078,0.0391996,0.659137,pretrained closer,0.0923915,0.719344,pretrained closer
52
+ V1_lib_trained,58 pairs: scratch vs full FT,T/NK states (5),0.463846,0.0171551,1.01047,pretrained closer,0.0188156,1.02493,pretrained closer
53
+ V1_lib_trained,58 pairs + recipes: scratch vs LoRA,13 rare,-0.0920275,-0.378931,0.176961,not significant,-0.39169,0.168302,not significant
54
+ V1_lib_trained,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),0.0509873,-0.306902,0.307689,not significant,-0.25248,0.342154,not significant
55
+ V1_lib_trained,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.475742,0.015504,0.901765,pretrained closer,0.0542454,0.937724,pretrained closer
56
+ V1_lib_trained,ref: scratch 5 pairs vs zero-shot,13 rare,-0.309764,-0.664889,-0.0775516,scratch closer,-0.622815,-0.0430511,scratch closer
57
+ V1_lib_trained,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),-0.191213,-0.645323,0.108376,not significant,-0.579557,0.146367,not significant
58
+ V1_lib_trained,ref: scratch 5 pairs vs zero-shot,T/NK states (5),0.101726,-0.358694,0.57453,not significant,-0.349238,0.590632,not significant
59
+ V1_lib_trained,ref: scratch 58 pairs vs zero-shot,13 rare,-0.440232,-0.815717,-0.200141,scratch closer,-0.730116,-0.145769,scratch closer
60
+ V1_lib_trained,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.333048,-0.80981,-0.0120013,scratch closer,-0.700243,0.0677238,not significant
61
+ V1_lib_trained,ref: scratch 58 pairs vs zero-shot,T/NK states (5),0.0869589,-0.33716,0.586926,not significant,-0.325311,0.616474,not significant
62
+ V1_lib_trained,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.561041,-0.926974,-0.338777,scratch closer,-0.899889,-0.326543,scratch closer
63
+ V1_lib_trained,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.455154,-0.922046,-0.180468,scratch closer,-0.829888,-0.123629,scratch closer
64
+ V1_lib_trained,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.0115418,-0.355095,0.434694,not significant,-0.388054,0.395075,not significant
65
+ V1_lib_all,5 pairs: scratch vs LoRA,13 rare,-0.0349776,-0.465111,0.235735,not significant,-0.385461,0.303063,not significant
66
+ V1_lib_all,5 pairs: scratch vs LoRA,11 marker states (no label states),0.103976,-0.454388,0.442894,not significant,-0.327954,0.522733,not significant
67
+ V1_lib_all,5 pairs: scratch vs LoRA,T/NK states (5),0.25238,-0.741943,0.890583,not significant,-0.686728,0.946215,not significant
68
+ V1_lib_all,58 pairs: scratch vs LoRA,13 rare,-0.105445,-0.471348,0.233717,not significant,-0.463338,0.253863,not significant
69
+ V1_lib_all,58 pairs: scratch vs LoRA,11 marker states (no label states),0.0466993,-0.364792,0.366473,not significant,-0.281402,0.445088,not significant
70
+ V1_lib_all,58 pairs: scratch vs LoRA,T/NK states (5),0.600819,0.0293587,1.08192,pretrained closer,0.141206,1.27213,pretrained closer
71
+ V1_lib_all,58 pairs: scratch vs full FT,13 rare,0.0330842,-0.281905,0.361965,not significant,-0.347069,0.309408,not significant
72
+ V1_lib_all,58 pairs: scratch vs full FT,11 marker states (no label states),0.230887,-0.14474,0.565727,not significant,-0.173662,0.532194,not significant
73
+ V1_lib_all,58 pairs: scratch vs full FT,T/NK states (5),0.544558,-0.169768,1.19323,not significant,-0.152846,1.2136,not significant
74
+ V1_lib_all,58 pairs + recipes: scratch vs LoRA,13 rare,-0.126721,-0.466624,0.176786,not significant,-0.464065,0.18275,not significant
75
+ V1_lib_all,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),0.00998582,-0.393283,0.296306,not significant,-0.305537,0.359947,not significant
76
+ V1_lib_all,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.416635,-0.211602,0.889352,not significant,-0.15738,0.930501,not significant
77
+ V1_lib_all,ref: scratch 5 pairs vs zero-shot,13 rare,-0.110362,-0.435391,0.169499,not significant,-0.426062,0.177705,not significant
78
+ V1_lib_all,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),0.0444444,-0.364179,0.386138,not significant,-0.347191,0.400932,not significant
79
+ V1_lib_all,ref: scratch 5 pairs vs zero-shot,T/NK states (5),0.104251,-0.365728,0.818323,not significant,-0.467005,0.653196,not significant
80
+ V1_lib_all,ref: scratch 58 pairs vs zero-shot,13 rare,-0.293321,-0.644808,-0.00285621,scratch closer,-0.634609,0.00527353,not significant
81
+ V1_lib_all,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.159426,-0.587846,0.206224,not significant,-0.5577,0.227903,not significant
82
+ V1_lib_all,ref: scratch 58 pairs vs zero-shot,T/NK states (5),-0.0652917,-0.557785,0.597626,not significant,-0.653987,0.453865,not significant
83
+ V1_lib_all,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.427789,-0.728892,-0.170075,scratch closer,-0.744265,-0.180377,scratch closer
84
+ V1_lib_all,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.297674,-0.690003,-0.00261677,scratch closer,-0.669998,0.0107489,not significant
85
+ V1_lib_all,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.345304,-0.652595,0.147696,not significant,-0.774589,-0.0077009,scratch closer
86
+ V2_msum_trained,5 pairs: scratch vs LoRA,13 rare,0.26151,-0.0760098,0.4899,not significant,-0.0118361,0.532682,not significant
87
+ V2_msum_trained,5 pairs: scratch vs LoRA,11 marker states (no label states),0.45437,0.0059427,0.74689,pretrained closer,0.0951343,0.808812,pretrained closer
88
+ V2_msum_trained,5 pairs: scratch vs LoRA,T/NK states (5),0.307171,-0.215558,0.777998,not significant,-0.182588,0.810557,not significant
89
+ V2_msum_trained,58 pairs: scratch vs LoRA,13 rare,-0.0109321,-0.380571,0.331915,not significant,-0.37168,0.338836,not significant
90
+ V2_msum_trained,58 pairs: scratch vs LoRA,11 marker states (no label states),0.158397,-0.260948,0.468735,not significant,-0.181717,0.542156,not significant
91
+ V2_msum_trained,58 pairs: scratch vs LoRA,T/NK states (5),0.642997,0.184368,1.11305,pretrained closer,0.232102,1.19168,pretrained closer
92
+ V2_msum_trained,58 pairs: scratch vs full FT,13 rare,0.0572318,-0.204036,0.372814,not significant,-0.228603,0.335021,not significant
93
+ V2_msum_trained,58 pairs: scratch vs full FT,11 marker states (no label states),0.259425,-0.0580292,0.572689,not significant,-0.0612075,0.569263,not significant
94
+ V2_msum_trained,58 pairs: scratch vs full FT,T/NK states (5),0.471305,-0.0427385,1.06833,not significant,-0.0483012,1.05296,not significant
95
+ V2_msum_trained,58 pairs + recipes: scratch vs LoRA,13 rare,-0.0477069,-0.35889,0.252724,not significant,-0.369022,0.234552,not significant
96
+ V2_msum_trained,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),0.103366,-0.267394,0.394548,not significant,-0.218541,0.430198,not significant
97
+ V2_msum_trained,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.487349,0.075501,0.921543,pretrained closer,0.0661266,0.913346,pretrained closer
98
+ V2_msum_trained,ref: scratch 5 pairs vs zero-shot,13 rare,-0.405429,-0.815144,-0.103365,scratch closer,-0.807601,-0.0995541,scratch closer
99
+ V2_msum_trained,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),-0.304272,-0.821121,0.0802208,not significant,-0.797284,0.0924027,not significant
100
+ V2_msum_trained,ref: scratch 5 pairs vs zero-shot,T/NK states (5),0.235626,-0.245299,0.827491,not significant,-0.274168,0.796948,not significant
101
+ V2_msum_trained,ref: scratch 58 pairs vs zero-shot,13 rare,-0.586621,-0.96758,-0.31117,scratch closer,-0.928282,-0.287948,scratch closer
102
+ V2_msum_trained,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.506054,-0.986373,-0.131134,scratch closer,-0.938677,-0.101817,scratch closer
103
+ V2_msum_trained,ref: scratch 58 pairs vs zero-shot,T/NK states (5),0.0575473,-0.425929,0.674429,not significant,-0.473623,0.594757,not significant
104
+ V2_msum_trained,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.730781,-1.09772,-0.441045,scratch closer,-1.12966,-0.456616,scratch closer
105
+ V2_msum_trained,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.655755,-1.13895,-0.281291,scratch closer,-1.1135,-0.266799,scratch closer
106
+ V2_msum_trained,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.0956973,-0.440181,0.366148,not significant,-0.505053,0.29005,not significant
107
+ V2_msum_all,5 pairs: scratch vs LoRA,13 rare,0.258762,-0.088391,0.493503,not significant,-0.00928511,0.5493,not significant
108
+ V2_msum_all,5 pairs: scratch vs LoRA,11 marker states (no label states),0.451122,-0.00239164,0.747675,not significant,0.100832,0.819533,pretrained closer
109
+ V2_msum_all,5 pairs: scratch vs LoRA,T/NK states (5),0.295158,-0.232484,0.764676,not significant,-0.193502,0.799035,not significant
110
+ V2_msum_all,58 pairs: scratch vs LoRA,13 rare,-0.0201186,-0.394959,0.318608,not significant,-0.386044,0.321836,not significant
111
+ V2_msum_all,58 pairs: scratch vs LoRA,11 marker states (no label states),0.14754,-0.274593,0.451783,not significant,-0.19961,0.523028,not significant
112
+ V2_msum_all,58 pairs: scratch vs LoRA,T/NK states (5),0.640106,0.160443,1.11011,pretrained closer,0.2201,1.19338,pretrained closer
113
+ V2_msum_all,58 pairs: scratch vs full FT,13 rare,0.0223938,-0.25056,0.35724,not significant,-0.282398,0.309155,not significant
114
+ V2_msum_all,58 pairs: scratch vs full FT,11 marker states (no label states),0.218253,-0.117669,0.550009,not significant,-0.124321,0.542903,not significant
115
+ V2_msum_all,58 pairs: scratch vs full FT,T/NK states (5),0.43505,-0.0680876,1.0496,not significant,-0.0872014,1.00967,not significant
116
+ V2_msum_all,58 pairs + recipes: scratch vs LoRA,13 rare,-0.0368172,-0.340251,0.258598,not significant,-0.358249,0.236406,not significant
117
+ V2_msum_all,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),0.116236,-0.247355,0.39224,not significant,-0.196627,0.442146,not significant
118
+ V2_msum_all,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.493456,0.0799308,0.928562,pretrained closer,0.0574526,0.918424,pretrained closer
119
+ V2_msum_all,ref: scratch 5 pairs vs zero-shot,13 rare,-0.383395,-0.791731,-0.0928275,scratch closer,-0.787636,-0.0888931,scratch closer
120
+ V2_msum_all,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),-0.278231,-0.784657,0.102523,not significant,-0.770215,0.112547,not significant
121
+ V2_msum_all,ref: scratch 5 pairs vs zero-shot,T/NK states (5),0.297354,-0.17671,0.871595,not significant,-0.208359,0.841704,not significant
122
+ V2_msum_all,ref: scratch 58 pairs vs zero-shot,13 rare,-0.578302,-0.94752,-0.308034,scratch closer,-0.933124,-0.299968,scratch closer
123
+ V2_msum_all,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.496222,-0.969362,-0.127994,scratch closer,-0.922652,-0.0925302,scratch closer
124
+ V2_msum_all,ref: scratch 58 pairs vs zero-shot,T/NK states (5),0.0898651,-0.387031,0.708217,not significant,-0.446107,0.607819,not significant
125
+ V2_msum_all,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.695407,-1.05736,-0.423804,scratch closer,-1.09133,-0.437892,scratch closer
126
+ V2_msum_all,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.613949,-1.09576,-0.261819,scratch closer,-1.06026,-0.235761,scratch closer
127
+ V2_msum_all,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.0259306,-0.359646,0.432162,not significant,-0.434534,0.339837,not significant
128
+ composition_std,5 pairs: scratch vs LoRA,13 rare,-0.00418341,-0.230722,0.169829,not significant,-0.189894,0.202285,not significant
129
+ composition_std,5 pairs: scratch vs LoRA,11 marker states (no label states),0.0986766,-0.205293,0.336139,not significant,-0.170873,0.37262,not significant
130
+ composition_std,5 pairs: scratch vs LoRA,T/NK states (5),0.166158,-0.262785,0.502833,not significant,-0.257696,0.503327,not significant
131
+ composition_std,58 pairs: scratch vs LoRA,13 rare,-0.0237164,-0.30954,0.170416,not significant,-0.260313,0.209697,not significant
132
+ composition_std,58 pairs: scratch vs LoRA,11 marker states (no label states),0.147077,-0.185987,0.30974,not significant,-0.0277934,0.438507,not significant
133
+ composition_std,58 pairs: scratch vs LoRA,T/NK states (5),0.419729,0.0821871,0.682875,pretrained closer,0.165488,0.797253,pretrained closer
134
+ composition_std,58 pairs: scratch vs full FT,13 rare,0.132605,-0.0743921,0.32053,not significant,-0.0909979,0.315077,not significant
135
+ composition_std,58 pairs: scratch vs full FT,11 marker states (no label states),0.343743,0.0646457,0.525057,pretrained closer,0.149759,0.603249,pretrained closer
136
+ composition_std,58 pairs: scratch vs full FT,T/NK states (5),0.445577,0.0110629,0.772777,pretrained closer,0.0959333,0.877836,pretrained closer
137
+ composition_std,58 pairs + recipes: scratch vs LoRA,13 rare,-0.206124,-0.438051,0.0582884,not significant,-0.496975,0.00908851,not significant
138
+ composition_std,58 pairs + recipes: scratch vs LoRA,11 marker states (no label states),-0.0997938,-0.41151,0.141277,not significant,-0.389012,0.164498,not significant
139
+ composition_std,58 pairs + recipes: scratch vs LoRA,T/NK states (5),0.139676,-0.198115,0.497533,not significant,-0.253782,0.452916,not significant
140
+ composition_std,ref: scratch 5 pairs vs zero-shot,13 rare,-0.320718,-0.627958,-0.130569,scratch closer,-0.605729,-0.117356,scratch closer
141
+ composition_std,ref: scratch 5 pairs vs zero-shot,11 marker states (no label states),-0.259172,-0.58881,-0.0177221,scratch closer,-0.582883,-0.0160882,scratch closer
142
+ composition_std,ref: scratch 5 pairs vs zero-shot,T/NK states (5),0.0295654,-0.306783,0.440954,not significant,-0.387432,0.361571,not significant
143
+ composition_std,ref: scratch 58 pairs vs zero-shot,13 rare,-0.439718,-0.754305,-0.215758,scratch closer,-0.774469,-0.224287,scratch closer
144
+ composition_std,ref: scratch 58 pairs vs zero-shot,11 marker states (no label states),-0.315147,-0.715033,-0.0295457,scratch closer,-0.702984,-0.0131069,scratch closer
145
+ composition_std,ref: scratch 58 pairs vs zero-shot,T/NK states (5),-0.0639031,-0.469428,0.342191,not significant,-0.504941,0.303391,not significant
146
+ composition_std,ref: scratch 58 + recipes vs zero-shot,13 rare,-0.575271,-0.880851,-0.336879,scratch closer,-0.901307,-0.353352,scratch closer
147
+ composition_std,ref: scratch 58 + recipes vs zero-shot,11 marker states (no label states),-0.467814,-0.858757,-0.178751,scratch closer,-0.826704,-0.170415,scratch closer
148
+ composition_std,ref: scratch 58 + recipes vs zero-shot,T/NK states (5),-0.243542,-0.594966,0.22422,not significant,-0.721833,0.136383,not significant