Archive 4 checkpoints (1-4)
Browse files- paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n40/lora/scoring_support.json +69 -0
- paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/receipts/score.json +61 -0
- paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/per_donor.csv +22 -0
- paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/summary.json +214 -0
paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold0/n40/lora/scoring_support.json
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{
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"schema": "pbisc.paper.strict-score-binding.v1",
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"support_sha256": "2418da2d8050f3ec761109aa5c1e5da234d88bc8bd7ed5f540dc44c10d046252",
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"cohort": "immicro",
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"unit": "fold0_n40",
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"test_sample_ids": [
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"HS3",
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"HS6",
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"HS7",
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"HS13",
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"HS18",
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"HS31",
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"HS34",
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"HS37",
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"HS38",
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"HS52",
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"HS58",
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"HS60",
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"HS66",
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"HS81",
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"HS82",
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"HS83",
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"HS85",
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"HS86",
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"HS95",
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"HS98",
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"HS101",
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"HS107"
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],
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"test_donor_ids": [
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"HS3",
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"HS6",
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"HS7",
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"HS13",
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"HS18",
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"HS31",
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"HS34",
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"HS37",
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"HS38",
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"HS52",
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"HS58",
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"HS60",
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"HS66",
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"HS81",
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"HS82",
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"HS83",
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"HS85",
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"HS86",
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"HS95",
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"HS98",
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"HS101",
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"HS107"
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],
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"arm_bindings": {
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"lora": {
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"arm": "lora",
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"npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold0/n40/lora.npz",
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"npz_sha256": "d7b1c36d6d67159955f871cc61fbd8731f89f2fe3286921a259c281c949971ae",
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"receipt": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold0/n40/lora.log",
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"receipt_sha256": "c9b3649a588c9227f77d5d53a1ba0724ae5247cb086e76d63f1c5291535fc67f",
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| 61 |
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"source_binding": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold0/n40/lora/RUN.json",
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| 62 |
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"source_binding_sha256": "3e4b3dcd38fefcc2828203c86d0a4476eb9928e1a20e6e2bb9375719ef578e84",
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| 63 |
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"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold0/n40/test_raw.npz",
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| 64 |
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"condition_sha256": "51ad5b8f668b55d80d2f8d275a3a2a9b56f7daa768d6b607dcea4b7379465f60",
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| 65 |
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"checkpoint_sha256": "5b19457e31d75884885163931736e092e586a9f16259362d622f78a957721cea",
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| 66 |
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"support_sha256": "2418da2d8050f3ec761109aa5c1e5da234d88bc8bd7ed5f540dc44c10d046252"
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}
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}
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}
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paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/receipts/score.json
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{
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"state": "completed",
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"stage": "score",
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"at": "2026-10-15T11:42:19.988496+00:00",
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"outputs": [
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/arms/lora/generated_cells.parquet",
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"sha256": "b56725d984faec09580b00a3989cd772f28c9b3eaec9d224e39948c33a7f7ed2",
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"bytes": 277240
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/arms/lora/labels/labels.manifest.json",
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"sha256": "e0e3a138f8dca6be7db035751bb5f9ea2a37ae539438aea7ef76560fd375561a",
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"bytes": 5058
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/arms/lora/labels/labels.parquet",
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"sha256": "23a037211a08c1b027f7226acc8e225f24d696658af5c8458f088dbaf03b2483",
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"bytes": 782545
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/per_donor.csv",
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"sha256": "65ffc7c8424d20f2e11c2a99de3c970fc4e3f0d6e7c973b10545c3af9d9f80ae",
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"bytes": 8466
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/summary.json",
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"sha256": "18b0693dfd7eb7409afc00ae1fd469ea1f2e0d91afa82384a97ac47ab254fef9",
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"bytes": 8496
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{
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/scoring_support.json",
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"sha256": "861cf3ae9d2a6030d36473475531834086a608bdaccdf57e62215b58645e9afc",
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"bytes": 2076
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],
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"support_sha256": "ae96bceb313de5c71379681084098d5d1288078b47cc602f229d39829510d522",
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| 38 |
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"binding": {
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| 39 |
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"arm": "lora",
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| 40 |
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"npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold3/n20/lora.npz",
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| 41 |
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"npz_sha256": "023c79e955d16f9b0276de836bfdf729f3b431fafa0923b0fdc8b65076366501",
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| 42 |
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"receipt": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold3/n20/lora.log",
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| 43 |
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"receipt_sha256": "3ebca6a1e17bccc4e1f1d7a49b3c5afc780073c7e2586ac30922e9a72daa3df5",
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| 44 |
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"source_binding": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold3/n20/lora/RUN.json",
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| 45 |
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"source_binding_sha256": "7488489b3fd805658231a45b4f1bc2874d03ca50cd1dd3858ff142fa1c3b3ae9",
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| 46 |
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"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold3/n20/test_raw.npz",
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| 47 |
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"condition_sha256": "dce8858d52803f436b448466b5619f696cb6df84bb2051772a78d792f089669b",
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| 48 |
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"checkpoint_sha256": "634c54e58b7885342ced223182f8c0bc90add95bd0b40379cdf8602ba3147bfc",
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| 49 |
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"support_sha256": "ae96bceb313de5c71379681084098d5d1288078b47cc602f229d39829510d522"
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| 50 |
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},
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| 51 |
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"reuse": {
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| 52 |
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"source_summary": {
|
| 53 |
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"path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/all_width_results_20261015/immicro/healthy/fold3/n20/score/summary.json",
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| 54 |
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"sha256": "9335fe5e60333b4f7bb76d991e033e815c781ab8c358f8af639f8dc01b9cd461",
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| 55 |
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"bytes": 7665
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| 56 |
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},
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| 57 |
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"source_arm": "lora",
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| 58 |
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"validated_support_sha256": "ae96bceb313de5c71379681084098d5d1288078b47cc602f229d39829510d522",
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| 59 |
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"annotation_reexecuted": false
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| 60 |
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}
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| 61 |
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}
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paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/per_donor.csv
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| 1 |
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arm,donor,group,n_generated_cells,n_observed_cells,n_reference_cells,gen_T cell,obs_T cell,gen_B cell,obs_B cell,gen_Monocyte,obs_Monocyte,gen_NK cell,obs_NK cell,gen_DC,obs_DC,gen_Other,obs_Other,comp_l1,comp_l1_obs_loo_null,pb_r,pb_own_rank,pb_top1,precision,coverage,precision_depth_matched,coverage_depth_matched,mono_pct_gen,mono_pct_obs,median_umi_gen,median_umi_obs
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| 2 |
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lora,HS1,DB1,1500,4384,150,0.7,0.6332116788321168,0.0793333333333333,0.0586222627737226,0.0786666666666666,0.1382299270072992,0.0953333333333333,0.1439324817518248,0.038,0.0184762773722627,0.0086666666666666,0.0075273722627737,0.2163248175182481,0.1477341288426135,0.9089834836460318,3,False,0.9933333333333332,0.98,0.9933333333333332,0.9866666666666668,7.866666666666666,13.822992700729928,2623.0,1738.0
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| 3 |
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lora,HS4,DB4,1500,4167,150,0.6486666666666666,0.54307655387569,0.0746666666666666,0.0453563714902807,0.1813333333333333,0.2371010319174466,0.06,0.142548596112311,0.0226666666666666,0.0242380609551235,0.0126666666666666,0.007679385649148,0.2797753779697624,0.2034821822143433,0.9063103741435028,18,False,0.9866666666666668,0.92,0.9933333333333332,0.9866666666666668,18.133333333333333,23.71010319174466,2843.0,2111.0
|
| 4 |
+
lora,HS10,DB4,1500,4115,150,0.646,0.5244228432563791,0.162,0.1834750911300121,0.1186666666666666,0.1300121506682867,0.0413333333333333,0.1375455650060753,0.022,0.0213851761846901,0.01,0.0031591737545565,0.2580656136087485,0.3134557004122763,0.9064988738842774,11,False,0.9666666666666668,0.9533333333333334,0.9666666666666668,0.9866666666666668,11.866666666666667,13.001215066828674,2867.5,2063.0
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| 5 |
+
lora,HS15,DB4,1500,4592,150,0.49,0.4697299651567944,0.0933333333333333,0.0463850174216027,0.3253333333333333,0.3728222996515679,0.05,0.0877613240418118,0.034,0.0195993031358885,0.0073333333333333,0.0037020905923344,0.1705005807200929,0.3877779459374335,0.9183668627065558,3,False,0.9866666666666668,0.9133333333333332,0.9933333333333332,0.9933333333333332,32.53333333333333,37.2822299651568,2805.0,2302.0
|
| 6 |
+
lora,HS23,DB6,1500,1680,150,0.62,0.5630952380952381,0.0906666666666666,0.0994047619047619,0.2193333333333333,0.2386904761904762,0.046,0.069047619047619,0.02,0.025,0.004,0.0047619047619047,0.1138095238095238,0.1625760901354886,0.9170575357395748,4,False,0.9866666666666668,0.9733333333333334,0.9933333333333332,0.9933333333333332,21.933333333333334,23.86904761904762,2873.0,2296.0
|
| 7 |
+
lora,HS29,DB5,1500,4285,150,0.6433333333333333,0.6550758459743291,0.068,0.0366394399066511,0.198,0.198833138856476,0.0526666666666666,0.0823803967327888,0.0273333333333333,0.0228704784130688,0.0106666666666666,0.0042007001166861,0.0845787631271879,0.1141214498312325,0.9107201326198944,7,False,0.98,0.9466666666666668,0.9866666666666668,1.0,19.8,19.88331388564761,2861.0,2230.0
|
| 8 |
+
lora,HS30,DB3,1500,6447,150,0.6506666666666666,0.5667752442996743,0.0586666666666666,0.0812781138514037,0.198,0.2647743136342484,0.0313333333333333,0.0493252675663099,0.0513333333333333,0.0348999534667287,0.01,0.0029471071816348,0.2147553901039242,0.2000760901354885,0.9061181897903688,1,True,0.9866666666666668,0.98,1.0,1.0,19.8,26.47743136342485,2735.5,2410.0
|
| 9 |
+
lora,HS40,DB2,1500,3867,150,0.6413333333333333,0.6938194983191104,0.0453333333333333,0.0457719162141194,0.1533333333333333,0.1549004396172743,0.1046666666666666,0.0752521334367726,0.046,0.0263770364623739,0.0093333333333333,0.0038789759503491,0.1089837083010085,0.1789519520251484,0.9050492713191598,4,False,0.9933333333333332,1.0,0.9866666666666668,1.0,15.333333333333332,15.490043961727435,2358.0,1477.0
|
| 10 |
+
lora,HS49,DB3,1500,3893,150,0.732,0.6773696378114564,0.048,0.0272283585923452,0.1166666666666666,0.1857179553043925,0.0533333333333333,0.0734651939378371,0.0353333333333333,0.0305676855895196,0.0146666666666666,0.005651168764449,0.1783662984844593,0.1543723943517594,0.9017650065042264,2,False,0.98,0.98,0.9866666666666668,1.0,11.666666666666666,18.57179553043925,2829.5,2103.0
|
| 11 |
+
lora,HS53,DB7,1500,1544,150,0.708,0.7506476683937824,0.0826666666666666,0.1023316062176165,0.1166666666666666,0.082901554404145,0.0466666666666666,0.0408031088082901,0.0326666666666666,0.0187823834196891,0.0133333333333333,0.0045336787564766,0.1246252158894646,0.352065151201056,0.8918119683999897,12,False,0.98,0.98,0.9933333333333332,1.0,11.666666666666666,8.290155440414509,2684.0,2239.5
|
| 12 |
+
lora,HS61,DB7,1500,1607,150,0.454,0.4971997510889857,0.0906666666666666,0.1001866832607343,0.308,0.2986932171748599,0.1113333333333333,0.0709396390790292,0.0266666666666666,0.028624766645924,0.0093333333333333,0.0043559427504667,0.1093557353246214,0.2978358910066771,0.9204772134365397,4,False,0.98,0.9533333333333334,0.9866666666666668,1.0,30.8,29.869321717485995,2602.5,2387.0
|
| 13 |
+
lora,HS62,DB3,1500,4121,150,0.7446666666666667,0.6699830138315943,0.0666666666666666,0.0778937151176898,0.096,0.1400145595729192,0.054,0.0888133948070856,0.0306666666666666,0.0206260616355253,0.008,0.0026692550351856,0.1801100056620561,0.1313498053106149,0.9027186555392682,1,True,0.9733333333333334,1.0,0.9866666666666668,1.0,9.6,14.00145595729192,2825.0,2159.0
|
| 14 |
+
lora,HS63,DB5,1500,4391,150,0.726,0.7214757458437714,0.0746666666666666,0.0546572534730129,0.0946666666666666,0.1505351856069232,0.0553333333333333,0.0530630835800501,0.034,0.0166249145980414,0.0153333333333333,0.0036438168982008,0.1117370378805131,0.2311605312893207,0.9009204193054682,9,False,0.9933333333333332,0.96,1.0,0.9866666666666668,9.466666666666669,15.053518560692323,2885.5,2196.0
|
| 15 |
+
lora,HS69,DB6,1500,1765,150,0.694,0.6957507082152975,0.082,0.0793201133144475,0.1453333333333333,0.1563739376770538,0.052,0.0464589235127478,0.0166666666666666,0.0203966005665722,0.01,0.001699716713881,0.0330424929178471,0.1884573997295827,0.9118641695354512,6,False,0.9933333333333332,0.98,1.0,1.0,14.533333333333337,15.63739376770538,2648.5,1982.0
|
| 16 |
+
lora,HS78,DB1,1500,4299,150,0.67,0.6366596882996045,0.128,0.087927424982554,0.0746666666666666,0.1228192602930914,0.0846666666666666,0.1139799953477553,0.0306666666666666,0.0281460804838334,0.012,0.0104675505931612,0.1549318446150268,0.1372284367153671,0.899879379424883,2,False,0.9933333333333332,1.0,1.0,1.0,7.466666666666668,12.28192602930914,2662.0,1732.0
|
| 17 |
+
lora,HS79,DB5,1500,4239,150,0.68,0.6161830620429346,0.1073333333333333,0.096485020051899,0.1386666666666666,0.158763859400802,0.0493333333333333,0.1118188251946213,0.0166666666666666,0.0141542816702052,0.008,0.0025949516395376,0.1651653691908469,0.0867962928517489,0.9115063342124776,9,False,1.0,0.8933333333333333,1.0,0.9933333333333332,13.866666666666664,15.876385940080208,2864.0,2188.0
|
| 18 |
+
lora,HS89,DB2,1500,3796,150,0.666,0.5795574288724974,0.042,0.0455742887249736,0.1593333333333333,0.1983667017913593,0.0826666666666666,0.1467334035827186,0.036,0.0221285563751317,0.014,0.0076396206533192,0.2133487881981032,0.1294669861737855,0.9049579314567808,4,False,0.9866666666666668,1.0,0.9933333333333332,1.0,15.933333333333334,19.836670179135933,2513.0,1510.0
|
| 19 |
+
lora,HS90,DB7,1500,1291,150,0.6966666666666667,0.6839659178931061,0.068,0.0658404337722695,0.1386666666666666,0.1363284275755228,0.0486666666666666,0.0844306738962045,0.0326666666666666,0.0240123934934159,0.0153333333333333,0.005422153369481,0.0715280144590756,0.1539775367919731,0.8826184864669774,14,False,0.98,0.9733333333333334,0.9866666666666668,1.0,13.866666666666664,13.632842757552286,2613.5,2183.0
|
| 20 |
+
lora,HS100,DB6,1500,1838,150,0.6486666666666666,0.6784548422198041,0.074,0.0500544069640914,0.192,0.1354733405875952,0.0393333333333333,0.1158868335146898,0.0306666666666666,0.0119695321001088,0.0153333333333333,0.0081610446137105,0.2126833514689881,0.1851796225957409,0.9095988815655108,7,False,1.0,0.9133333333333332,1.0,0.9933333333333332,19.2,13.547334058759525,2943.5,2221.0
|
| 21 |
+
lora,HS106,DB2,1500,3949,150,0.5533333333333333,0.4084578374271967,0.0646666666666666,0.0395036718156495,0.2513333333333333,0.2985565966067359,0.0846666666666666,0.2114459356799189,0.0333333333333333,0.0354520131678906,0.0126666666666666,0.0065839453026082,0.3522424242424242,0.4984721560729047,0.9181380380825904,2,False,1.0,0.98,0.9933333333333332,1.0,25.133333333333336,29.855659660673588,2545.5,1685.0
|
| 22 |
+
lora,HS110,DB1,1500,4176,150,0.596,0.5744731800766284,0.1766666666666666,0.1285919540229885,0.1246666666666666,0.1515804597701149,0.06,0.1087164750957854,0.034,0.0308908045977011,0.0086666666666666,0.0057471264367816,0.1512605363984673,0.1543747746352972,0.9090169323645896,3,False,0.9733333333333334,1.0,0.9866666666666668,1.0,12.466666666666669,15.158045977011495,2530.5,1704.5
|
paper-releases/pbisc-diffusion/updates/20261015T121654Z-x1-nine-core40-deck/diffusion/dataset/server_1/model8/plans/paper_figures_strictpairs_20261012/recoveries/x1_priority_completion_20261015/evaluation/units/immicro/healthy/fold3/n20/lora/score/summary.json
ADDED
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|
| 1 |
+
{
|
| 2 |
+
"schema": "paired_ft_scores.v1",
|
| 3 |
+
"dataset": "immicro",
|
| 4 |
+
"written_utc": "2026-10-15T09:51:30.356912+00:00",
|
| 5 |
+
"command": [
|
| 6 |
+
"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/tools/score_ft.py",
|
| 7 |
+
"--dataset",
|
| 8 |
+
"immicro",
|
| 9 |
+
"--out",
|
| 10 |
+
"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/all_width_results_20261015/immicro/healthy/fold3/n20/score",
|
| 11 |
+
"--arm",
|
| 12 |
+
"lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold3/n20/lora.npz",
|
| 13 |
+
"--condition",
|
| 14 |
+
"lora=/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold3/n20/test_raw.npz",
|
| 15 |
+
"--donors",
|
| 16 |
+
"/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/recoveries/all_width_results_20261015/immicro/healthy/fold3/n20/test_samples.txt",
|
| 17 |
+
"--threads",
|
| 18 |
+
"2",
|
| 19 |
+
"--no-contrast",
|
| 20 |
+
"--no-deg"
|
| 21 |
+
],
|
| 22 |
+
"arms": [
|
| 23 |
+
"lora"
|
| 24 |
+
],
|
| 25 |
+
"donors": [
|
| 26 |
+
"HS1",
|
| 27 |
+
"HS4",
|
| 28 |
+
"HS10",
|
| 29 |
+
"HS15",
|
| 30 |
+
"HS23",
|
| 31 |
+
"HS29",
|
| 32 |
+
"HS30",
|
| 33 |
+
"HS40",
|
| 34 |
+
"HS49",
|
| 35 |
+
"HS53",
|
| 36 |
+
"HS61",
|
| 37 |
+
"HS62",
|
| 38 |
+
"HS63",
|
| 39 |
+
"HS69",
|
| 40 |
+
"HS78",
|
| 41 |
+
"HS79",
|
| 42 |
+
"HS89",
|
| 43 |
+
"HS90",
|
| 44 |
+
"HS100",
|
| 45 |
+
"HS106",
|
| 46 |
+
"HS110"
|
| 47 |
+
],
|
| 48 |
+
"n_donors": 21,
|
| 49 |
+
"reference": {
|
| 50 |
+
"cache": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scoring_cache/immicro",
|
| 51 |
+
"reference_sha256": "c5e2547be3ec3b12cb0c0b404a49e14a046ae59d40be70427f98f083a76bce17",
|
| 52 |
+
"features_sha256": "735255066ce7ebbac13a1fdfd058e26f31edd60314cc02fd589b0a292dbbc838",
|
| 53 |
+
"n_r1_cells": 3150,
|
| 54 |
+
"pca": {
|
| 55 |
+
"n_components": 50,
|
| 56 |
+
"explained_variance_ratio_sum": 0.3122588098049164,
|
| 57 |
+
"n_fit_cells": 3150
|
| 58 |
+
},
|
| 59 |
+
"r2_control": {
|
| 60 |
+
"precision": 0.993968253968254,
|
| 61 |
+
"coverage": 1.0,
|
| 62 |
+
"density": 2.678,
|
| 63 |
+
"n_query": 3150,
|
| 64 |
+
"depth_matched": {
|
| 65 |
+
"precision": 0.9926984126984127,
|
| 66 |
+
"coverage": 1.0,
|
| 67 |
+
"density": 2.6237142857142857
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"observed_l1_loo_null_mean": 0.20994821515523107
|
| 71 |
+
},
|
| 72 |
+
"contrast_definition": {
|
| 73 |
+
"enabled": false,
|
| 74 |
+
"reason": "--no-contrast"
|
| 75 |
+
},
|
| 76 |
+
"deg_definition": {
|
| 77 |
+
"enabled": false,
|
| 78 |
+
"reason": "--no-deg"
|
| 79 |
+
},
|
| 80 |
+
"headline": {
|
| 81 |
+
"lora": {
|
| 82 |
+
"comp_l1": 0.16691385189954241,
|
| 83 |
+
"comp_l1_obs_loo_null": 0.20994821515523107,
|
| 84 |
+
"precision": 0.9863492063492063,
|
| 85 |
+
"coverage": 0.9657142857142857,
|
| 86 |
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"precision_dm": 0.9917460317460317,
|
| 87 |
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"coverage_dm": 0.9961904761904762,
|
| 88 |
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"pb_r_median": 0.9064988738842774,
|
| 89 |
+
"pb_top1": 0.09523809523809523,
|
| 90 |
+
"mono_pct_gen": 16.330158730158733,
|
| 91 |
+
"mono_pct_obs": 18.816613491945674,
|
| 92 |
+
"median_umi_gen": 2717.0,
|
| 93 |
+
"median_umi_obs": 2016.0,
|
| 94 |
+
"seconds": 8.4
|
| 95 |
+
}
|
| 96 |
+
},
|
| 97 |
+
"per_arm": {
|
| 98 |
+
"lora": {
|
| 99 |
+
"arm": "lora",
|
| 100 |
+
"npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/generated/immicro/healthy/fold3/n20/lora.npz",
|
| 101 |
+
"npz_sha256": "023c79e955d16f9b0276de836bfdf729f3b431fafa0923b0fdc8b65076366501",
|
| 102 |
+
"receipt_verified": true,
|
| 103 |
+
"generation": {
|
| 104 |
+
"checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/runs/immicro/healthy/fold3/n20/lora/checkpoint_ft.pt",
|
| 105 |
+
"checkpoint_sha256": "634c54e58b7885342ced223182f8c0bc90add95bd0b40379cdf8602ba3147bfc",
|
| 106 |
+
"input_condition_path": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paper_figures_strictpairs_20261012/data/immicro/healthy/fold3/n20/test_raw.npz",
|
| 107 |
+
"input_condition_sha256": "dce8858d52803f436b448466b5619f696cb6df84bb2051772a78d792f089669b",
|
| 108 |
+
"seed": 20260928,
|
| 109 |
+
"steps": 50,
|
| 110 |
+
"support_readout": "bernoulli",
|
| 111 |
+
"weights": "ema"
|
| 112 |
+
},
|
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