Archive 4 checkpoints (1-4)

paper-releases/pbisc-diffusion/updates/20261004T051658Z-behcet-c1q-lora3/diffusion/dataset/server_1/model8/plans/behcet_c1q_lora3_20261004/out/rules_groups/per_sample_group_metrics.csv

@@ -0,0 +1,120 @@
+arm,sample_id,n_cells,n_monocytes,n_other_label,monocyte_fraction_all_cells,monocyte_fraction_pbmc5_cells,group,subtype,c1q_high_fraction_D,n_c1q_high_D,c1q_high_fraction_A,n_c1q_high_A,c1q_high_fraction_B,n_c1q_high_B,c1q_high_fraction_C,n_c1q_high_C,meta_age,meta_condition,meta_gsm,meta_sex,meta_subtype,meta_Age,meta_CNS_involvement,meta_Erythema_nodule,meta_Gastrointestinal_involvement,meta_Genital_ulcer,meta_Ocular_involvement,meta_Oral_ulcer,meta_Sex,meta_Vascular_involvement
+zs_raw_s13,BDU1,5000,1331,100,0.2662,0.27163265306122447,BD,BDU,0.018782870022539443,25,0.018782870022539443,25,0.0007513148009015778,1,0.003756574004507889,5,24,BD patients,GSM5951808,male,BDU,,,,,,,,,
+zs_raw_s13,BDU2,5000,987,103,0.1974,0.20155197059424138,BD,BDU,0.02127659574468085,21,0.02127659574468085,21,0.0,0,0.004052684903748734,4,30,BD patients,GSM5951809,male,BDU,,,,,,,,,
+zs_raw_s13,BDU3,5000,1618,132,0.3236,0.3323746918652424,BD,BDU,0.01792336217552534,29,0.01792336217552534,29,0.0012360939431396785,2,0.004326328800988875,7,25,BD patients,GSM5951810,male,BDU,,,,,,,,,
+zs_raw_s13,BDV1,5000,1885,225,0.377,0.3947643979057592,BD,BDV,0.019628647214854113,37,0.019628647214854113,37,0.0015915119363395225,3,0.005305039787798408,10,46,BD patients,GSM5951802,male,BDV,,,,,,,,,
+zs_raw_s13,BDV2,5000,1907,146,0.3814,0.39287185826122784,BD,BDV,0.02779234399580493,53,0.02779234399580493,53,0.0015731515469323545,3,0.006292606187729418,12,24,BD patients,GSM5951803,male,BDV,,,,,,,,,
+zs_raw_s13,BDV3,5000,1328,161,0.2656,0.27443686712130605,BD,BDV,0.024096385542168676,32,0.024096385542168676,32,0.0015060240963855422,2,0.00677710843373494,9,42,BD patients,GSM5951804,male,BDV,,,,,,,,,
+zs_raw_s13,BDV4,5000,1150,105,0.23,0.23493360572012256,BD,BDV,0.02782608695652174,32,0.02782608695652174,32,0.0,0,0.00608695652173913,7,31,BD patients,GSM5951805,male,BDV,,,,,,,,,
+zs_raw_s13,BDV5,5000,2200,291,0.44,0.4671904863028244,BD,BDV,0.012727272727272728,28,0.012727272727272728,28,0.0013636363636363637,3,0.004090909090909091,9,58,BD patients,GSM5951806,male,BDV,,,,,,,,,
+zs_raw_s13,BDV6,5000,2219,143,0.4438,0.4568663784228948,BD,BDV,0.020730058584948176,46,0.020730058584948176,46,0.0009013068949977468,2,0.004957187922487607,11,41,BD patients,GSM5951807,male,BDV,,,,,,,,,
+zs_raw_s13,HC1,5000,1530,57,0.306,0.30952862634027917,HC,HC,0.026143790849673203,40,0.026143790849673203,40,0.00065359477124183,1,0.00784313725490196,12,18,healthy control,GSM5951811,male,HC,,,,,,,,,
+zs_raw_s13,HC10,5000,1139,68,0.2278,0.23094079480940793,HC,HC,0.0228270412642669,26,0.0228270412642669,26,0.001755926251097454,2,0.0052677787532923615,6,48,healthy control,GSM5951820,male,HC,,,,,,,,,
+zs_raw_s13,HC2,5000,1120,67,0.224,0.22704236772754915,HC,HC,0.017857142857142856,20,0.017857142857142856,20,0.0,0,0.0,0,47,healthy control,GSM5951812,male,HC,,,,,,,,,
+zs_raw_s13,HC3,5000,779,64,0.1558,0.1578200972447326,HC,HC,0.029525032092426188,23,0.029525032092426188,23,0.0025673940949935813,2,0.006418485237483954,5,18,healthy control,GSM5951813,male,HC,,,,,,,,,
+zs_raw_s13,HC4,5000,1561,102,0.3122,0.31870151082074316,HC,HC,0.03587443946188341,56,0.03587443946188341,56,0.004484304932735426,7,0.008968609865470852,14,53,healthy control,GSM5951814,male,HC,,,,,,,,,
+zs_raw_s13,HC5,5000,898,22,0.1796,0.1803937324226597,HC,HC,0.035634743875278395,32,0.035634743875278395,32,0.0022271714922048997,2,0.0077951002227171495,7,58,healthy control,GSM5951815,male,HC,,,,,,,,,
+zs_raw_s13,HC6,5000,367,60,0.0734,0.0742914979757085,HC,HC,0.0326975476839237,12,0.0326975476839237,12,0.0027247956403269754,1,0.008174386920980926,3,18,healthy control,GSM5951816,male,HC,,,,,,,,,
+zs_raw_s13,HC7,5000,968,81,0.1936,0.1967879650335434,HC,HC,0.028925619834710745,28,0.028925619834710745,28,0.0010330578512396695,1,0.007231404958677686,7,41,healthy control,GSM5951817,male,HC,,,,,,,,,
+zs_raw_s13,HC8,5000,1115,79,0.223,0.22657996342206868,HC,HC,0.036771300448430494,41,0.036771300448430494,41,0.0008968609865470852,1,0.013452914798206279,15,36,healthy control,GSM5951818,male,HC,,,,,,,,,
+zs_raw_s13,HC9,5000,551,53,0.1102,0.11138063472811806,HC,HC,0.043557168784029036,24,0.043557168784029036,24,0.003629764065335753,2,0.014519056261343012,8,36,healthy control,GSM5951819,male,HC,,,,,,,,,
+zs_cal_s13,BDU1,5000,632,62,0.1264,0.1279870392871608,BD,BDU,0.02689873417721519,17,0.02689873417721519,17,0.0,0,0.00949367088607595,6,24,BD patients,GSM5951808,male,BDU,,,,,,,,,
+zs_cal_s13,BDU2,5000,330,49,0.066,0.06665320137345991,BD,BDU,0.048484848484848485,16,0.048484848484848485,16,0.006060606060606061,2,0.015151515151515152,5,30,BD patients,GSM5951809,male,BDU,,,,,,,,,
+zs_cal_s13,BDU3,5000,592,68,0.1184,0.12003244120032441,BD,BDU,0.04560810810810811,27,0.04560810810810811,27,0.0016891891891891893,1,0.006756756756756757,4,25,BD patients,GSM5951810,male,BDU,,,,,,,,,
+zs_cal_s13,BDV1,5000,901,92,0.1802,0.18357783211083945,BD,BDV,0.05438401775804662,49,0.05438401775804662,49,0.006659267480577136,6,0.01553829078801332,14,46,BD patients,GSM5951802,male,BDV,,,,,,,,,
+zs_cal_s13,BDV2,5000,565,47,0.113,0.11407227942661013,BD,BDV,0.061946902654867256,35,0.061946902654867256,35,0.0035398230088495575,2,0.017699115044247787,10,24,BD patients,GSM5951803,male,BDV,,,,,,,,,
+zs_cal_s13,BDV3,5000,1026,138,0.2052,0.21102426984779926,BD,BDV,0.03508771929824561,36,0.03508771929824561,36,0.0029239766081871343,3,0.011695906432748537,12,42,BD patients,GSM5951804,male,BDV,,,,,,,,,
+zs_cal_s13,BDV4,5000,678,53,0.1356,0.13705275924802912,BD,BDV,0.02359882005899705,16,0.02359882005899705,16,0.0029498525073746312,2,0.004424778761061947,3,31,BD patients,GSM5951805,male,BDV,,,,,,,,,
+zs_cal_s13,BDV5,5000,1008,175,0.2016,0.2089119170984456,BD,BDV,0.04563492063492063,46,0.04563492063492063,46,0.003968253968253968,4,0.01488095238095238,15,58,BD patients,GSM5951806,male,BDV,,,,,,,,,
+zs_cal_s13,BDV6,5000,1121,105,0.2242,0.22900919305413686,BD,BDV,0.04460303300624442,50,0.04460303300624442,50,0.001784121320249777,2,0.01159678858162355,13,41,BD patients,GSM5951807,male,BDV,,,,,,,,,
+zs_cal_s13,HC1,5000,907,91,0.1814,0.18476268079038502,HC,HC,0.04851157662624035,44,0.04851157662624035,44,0.002205071664829107,2,0.012127894156560088,11,18,healthy control,GSM5951811,male,HC,,,,,,,,,
+zs_cal_s13,HC10,5000,575,80,0.115,0.11686991869918699,HC,HC,0.02434782608695652,14,0.02434782608695652,14,0.0017391304347826088,1,0.010434782608695653,6,48,healthy control,GSM5951820,male,HC,,,,,,,,,
+zs_cal_s13,HC2,5000,548,57,0.1096,0.11086384786566862,HC,HC,0.025547445255474453,14,0.025547445255474453,14,0.0018248175182481751,1,0.0036496350364963502,2,47,healthy control,GSM5951812,male,HC,,,,,,,,,
+zs_cal_s13,HC3,5000,461,52,0.0922,0.09316895715440582,HC,HC,0.019522776572668113,9,0.019522776572668113,9,0.0,0,0.0021691973969631237,1,18,healthy control,GSM5951813,male,HC,,,,,,,,,
+zs_cal_s13,HC4,5000,828,100,0.1656,0.1689795918367347,HC,HC,0.051932367149758456,43,0.051932367149758456,43,0.0036231884057971015,3,0.012077294685990338,10,53,healthy control,GSM5951814,male,HC,,,,,,,,,
+zs_cal_s13,HC5,5000,255,26,0.051,0.05126658624849216,HC,HC,0.06274509803921569,16,0.06274509803921569,16,0.00784313725490196,2,0.023529411764705882,6,58,healthy control,GSM5951815,male,HC,,,,,,,,,
+zs_cal_s13,HC6,5000,256,40,0.0512,0.05161290322580645,HC,HC,0.01953125,5,0.01953125,5,0.0,0,0.0,0,18,healthy control,GSM5951816,male,HC,,,,,,,,,
+zs_cal_s13,HC7,5000,718,53,0.1436,0.14513846775823733,HC,HC,0.027855153203342618,20,0.027855153203342618,20,0.005571030640668524,4,0.006963788300835654,5,41,healthy control,GSM5951817,male,HC,,,,,,,,,
+zs_cal_s13,HC8,5000,531,62,0.1062,0.10753341433778858,HC,HC,0.02071563088512241,11,0.02071563088512241,11,0.005649717514124294,3,0.011299435028248588,6,36,healthy control,GSM5951818,male,HC,,,,,,,,,
+zs_cal_s13,HC9,5000,430,68,0.086,0.08718572587185726,HC,HC,0.04186046511627907,18,0.04186046511627907,18,0.002325581395348837,1,0.0069767441860465115,3,36,healthy control,GSM5951819,male,HC,,,,,,,,,
+lora3_raw_s13,BDU1,5000,808,37,0.1616,0.16280475518839413,BD,BDU,0.034653465346534656,28,0.034653465346534656,28,0.0024752475247524753,2,0.011138613861386138,9,24,BD patients,GSM5951808,male,BDU,,,,,,,,,
+lora3_raw_s13,BDU2,5000,560,13,0.112,0.11229195909364348,BD,BDU,0.03214285714285714,18,0.03214285714285714,18,0.0,0,0.008928571428571428,5,30,BD patients,GSM5951809,male,BDU,,,,,,,,,
+lora3_raw_s13,BDU3,5000,841,41,0.1682,0.1695906432748538,BD,BDU,0.04518430439952437,38,0.04518430439952437,38,0.005945303210463734,5,0.020214030915576695,17,25,BD patients,GSM5951810,male,BDU,,,,,,,,,
+lora3_raw_s13,BDV1,5000,930,29,0.186,0.18708509354254677,BD,BDV,0.06881720430107527,64,0.06881720430107527,64,0.002150537634408602,2,0.01935483870967742,18,46,BD patients,GSM5951802,male,BDV,,,,,,,,,
+lora3_raw_s13,BDV2,5000,758,17,0.1516,0.15211719847481436,BD,BDV,0.06596306068601583,50,0.06596306068601583,50,0.0013192612137203166,1,0.013192612137203167,10,24,BD patients,GSM5951803,male,BDV,,,,,,,,,
+lora3_raw_s13,BDV3,5000,893,77,0.1786,0.18139345927280115,BD,BDV,0.04479283314669653,40,0.04479283314669653,40,0.0033594624860022394,3,0.011198208286674132,10,42,BD patients,GSM5951804,male,BDV,,,,,,,,,
+lora3_raw_s13,BDV4,5000,683,19,0.1366,0.1371210600281068,BD,BDV,0.05417276720351391,37,0.05417276720351391,37,0.010248901903367497,7,0.02342606149341142,16,31,BD patients,GSM5951805,male,BDV,,,,,,,,,
+lora3_raw_s13,BDV5,5000,962,91,0.1924,0.19596659197392544,BD,BDV,0.04781704781704782,46,0.04781704781704782,46,0.007276507276507277,7,0.018711018711018712,18,58,BD patients,GSM5951806,male,BDV,,,,,,,,,
+lora3_raw_s13,BDV6,5000,1011,108,0.2022,0.20666394112837286,BD,BDV,0.03560830860534125,36,0.03560830860534125,36,0.004945598417408506,5,0.011869436201780416,12,41,BD patients,GSM5951807,male,BDV,,,,,,,,,
+lora3_raw_s13,HC1,5000,912,71,0.1824,0.18502738892270237,HC,HC,0.023026315789473683,21,0.023026315789473683,21,0.0,0,0.006578947368421052,6,18,healthy control,GSM5951811,male,HC,,,,,,,,,
+lora3_raw_s13,HC10,5000,655,81,0.131,0.1331571457613336,HC,HC,0.03358778625954199,22,0.03358778625954199,22,0.0015267175572519084,1,0.013740458015267175,9,48,healthy control,GSM5951820,male,HC,,,,,,,,,
+lora3_raw_s13,HC2,5000,671,54,0.1342,0.13566518398706026,HC,HC,0.043219076005961254,29,0.043219076005961254,29,0.0029806259314456036,2,0.010432190760059613,7,47,healthy control,GSM5951812,male,HC,,,,,,,,,
+lora3_raw_s13,HC3,5000,494,31,0.0988,0.09941638156570738,HC,HC,0.032388663967611336,16,0.032388663967611336,16,0.004048582995951417,2,0.010121457489878543,5,18,healthy control,GSM5951813,male,HC,,,,,,,,,
+lora3_raw_s13,HC4,5000,795,89,0.159,0.16188149053145998,HC,HC,0.045283018867924525,36,0.045283018867924525,36,0.0037735849056603774,3,0.016352201257861635,13,53,healthy control,GSM5951814,male,HC,,,,,,,,,
+lora3_raw_s13,HC5,5000,341,26,0.0682,0.06855649376759147,HC,HC,0.07624633431085044,26,0.07624633431085044,26,0.002932551319648094,1,0.020527859237536656,7,58,healthy control,GSM5951815,male,HC,,,,,,,,,
+lora3_raw_s13,HC6,5000,347,22,0.0694,0.06970670952189634,HC,HC,0.03170028818443804,11,0.03170028818443804,11,0.0,0,0.008645533141210375,3,18,healthy control,GSM5951816,male,HC,,,,,,,,,
+lora3_raw_s13,HC7,5000,646,74,0.1292,0.1311408850994722,HC,HC,0.032507739938080496,21,0.032507739938080496,21,0.0030959752321981426,2,0.01238390092879257,8,41,healthy control,GSM5951817,male,HC,,,,,,,,,
+lora3_raw_s13,HC8,5000,578,47,0.1156,0.11669695134262063,HC,HC,0.03633217993079585,21,0.03633217993079585,21,0.0017301038062283738,1,0.005190311418685121,3,36,healthy control,GSM5951818,male,HC,,,,,,,,,
+lora3_raw_s13,HC9,5000,493,40,0.0986,0.09939516129032258,HC,HC,0.04056795131845842,20,0.04056795131845842,20,0.004056795131845842,2,0.008113590263691683,4,36,healthy control,GSM5951819,male,HC,,,,,,,,,
+lora3_raw_s04,BDU1,5000,814,32,0.1628,0.1638486312399356,BD,BDU,0.051597051597051594,42,0.051597051597051594,42,0.0085995085995086,7,0.019656019656019656,16,24,BD patients,GSM5951808,male,BDU,,,,,,,,,
+lora3_raw_s04,BDU2,5000,576,15,0.1152,0.11554663991975928,BD,BDU,0.03993055555555555,23,0.03993055555555555,23,0.003472222222222222,2,0.012152777777777778,7,30,BD patients,GSM5951809,male,BDU,,,,,,,,,
+lora3_raw_s04,BDU3,5000,850,52,0.17,0.17178658043654002,BD,BDU,0.04352941176470588,37,0.04352941176470588,37,0.002352941176470588,2,0.010588235294117647,9,25,BD patients,GSM5951810,male,BDU,,,,,,,,,
+lora3_raw_s04,BDV1,5000,943,33,0.1886,0.1898530299979867,BD,BDV,0.07635206786850478,72,0.07635206786850478,72,0.003181336161187699,3,0.02545068928950159,24,46,BD patients,GSM5951802,male,BDV,,,,,,,,,
+lora3_raw_s04,BDV2,5000,741,14,0.1482,0.1486161251504212,BD,BDV,0.06342780026990553,47,0.06342780026990553,47,0.001349527665317139,1,0.017543859649122806,13,24,BD patients,GSM5951803,male,BDV,,,,,,,,,
+lora3_raw_s04,BDV3,5000,888,73,0.1776,0.18023137812056017,BD,BDV,0.041666666666666664,37,0.041666666666666664,37,0.0033783783783783786,3,0.007882882882882882,7,42,BD patients,GSM5951804,male,BDV,,,,,,,,,
+lora3_raw_s04,BDV4,5000,696,21,0.1392,0.1397871058445471,BD,BDV,0.05316091954022988,37,0.05316091954022988,37,0.011494252873563218,8,0.02442528735632184,17,31,BD patients,GSM5951805,male,BDV,,,,,,,,,
+lora3_raw_s04,BDV5,5000,946,77,0.1892,0.19215925248832014,BD,BDV,0.05391120507399577,51,0.05391120507399577,51,0.005285412262156448,5,0.017970401691331923,17,58,BD patients,GSM5951806,male,BDV,,,,,,,,,
+lora3_raw_s04,BDV6,5000,1016,125,0.2032,0.2084102564102564,BD,BDV,0.0344488188976378,35,0.0344488188976378,35,0.000984251968503937,1,0.005905511811023622,6,41,BD patients,GSM5951807,male,BDV,,,,,,,,,
+lora3_raw_s04,HC1,5000,908,62,0.1816,0.18388011340623733,HC,HC,0.02643171806167401,24,0.02643171806167401,24,0.0,0,0.00881057268722467,8,18,healthy control,GSM5951811,male,HC,,,,,,,,,
+lora3_raw_s04,HC10,5000,650,82,0.13,0.1321675477836519,HC,HC,0.027692307692307693,18,0.027692307692307693,18,0.004615384615384616,3,0.012307692307692308,8,48,healthy control,GSM5951820,male,HC,,,,,,,,,
+lora3_raw_s04,HC2,5000,676,51,0.1352,0.1365932511618509,HC,HC,0.034023668639053255,23,0.034023668639053255,23,0.0014792899408284023,1,0.004437869822485207,3,47,healthy control,GSM5951812,male,HC,,,,,,,,,
+lora3_raw_s04,HC3,5000,500,27,0.1,0.10054293183189222,HC,HC,0.02,10,0.02,10,0.002,1,0.01,5,18,healthy control,GSM5951813,male,HC,,,,,,,,,
+lora3_raw_s04,HC4,5000,801,91,0.1602,0.16316968832756162,HC,HC,0.039950062421972535,32,0.039950062421972535,32,0.004993757802746567,4,0.011235955056179775,9,53,healthy control,GSM5951814,male,HC,,,,,,,,,
+lora3_raw_s04,HC5,5000,347,24,0.0694,0.06973472668810289,HC,HC,0.05475504322766571,19,0.05475504322766571,19,0.002881844380403458,1,0.01440922190201729,5,58,healthy control,GSM5951815,male,HC,,,,,,,,,
+lora3_raw_s04,HC6,5000,351,18,0.0702,0.0704536330790847,HC,HC,0.03133903133903134,11,0.03133903133903134,11,0.005698005698005698,2,0.011396011396011397,4,18,healthy control,GSM5951816,male,HC,,,,,,,,,
+lora3_raw_s04,HC7,5000,653,62,0.1306,0.1322397731875253,HC,HC,0.03215926493108729,21,0.03215926493108729,21,0.004594180704441042,3,0.010719754977029096,7,41,healthy control,GSM5951817,male,HC,,,,,,,,,
+lora3_raw_s04,HC8,5000,576,43,0.1152,0.11619931410127093,HC,HC,0.04861111111111111,28,0.04861111111111111,28,0.006944444444444444,4,0.017361111111111112,10,36,healthy control,GSM5951818,male,HC,,,,,,,,,
+lora3_raw_s04,HC9,5000,495,36,0.099,0.09971796937953263,HC,HC,0.04040404040404041,20,0.04040404040404041,20,0.00202020202020202,1,0.01818181818181818,9,36,healthy control,GSM5951819,male,HC,,,,,,,,,
+zs_raw_s04,BDU1,5000,1310,113,0.262,0.26805811336198077,BD,BDU,0.0183206106870229,24,0.0183206106870229,24,0.0,0,0.0015267175572519084,2,24,BD patients,GSM5951808,male,BDU,,,,,,,,,
+zs_raw_s04,BDU2,5000,997,99,0.1994,0.20342787186288513,BD,BDU,0.031093279839518557,31,0.031093279839518557,31,0.0020060180541624875,2,0.007021063189568706,7,30,BD patients,GSM5951809,male,BDU,,,,,,,,,
+zs_raw_s04,BDU3,5000,1619,122,0.3238,0.33189831898318983,BD,BDU,0.025941939468807906,42,0.025941939468807906,42,0.0018529956763434219,3,0.006176652254478073,10,25,BD patients,GSM5951810,male,BDU,,,,,,,,,
+zs_raw_s04,BDV1,5000,1909,216,0.3818,0.39903846153846156,BD,BDV,0.016238868517548456,31,0.016238868517548456,31,0.0005238344683080147,1,0.0041906757464641176,8,46,BD patients,GSM5951802,male,BDV,,,,,,,,,
+zs_raw_s04,BDV2,5000,1904,145,0.3808,0.392173017507724,BD,BDV,0.019432773109243698,37,0.019432773109243698,37,0.0010504201680672268,2,0.0021008403361344537,4,24,BD patients,GSM5951803,male,BDV,,,,,,,,,
+zs_raw_s04,BDV3,5000,1331,157,0.2662,0.2748296510427421,BD,BDV,0.022539444027047332,30,0.022539444027047332,30,0.002253944402704733,3,0.007513148009015778,10,42,BD patients,GSM5951804,male,BDV,,,,,,,,,
+zs_raw_s04,BDV4,5000,1173,104,0.2346,0.23958333333333334,BD,BDV,0.027280477408354646,32,0.027280477408354646,32,0.0008525149190110827,1,0.005115089514066497,6,31,BD patients,GSM5951805,male,BDV,,,,,,,,,
+zs_raw_s04,BDV5,5000,2186,289,0.4372,0.4640203778391,BD,BDV,0.011893870082342177,26,0.011893870082342177,26,0.0,0,0.0022872827081427266,5,58,BD patients,GSM5951806,male,BDV,,,,,,,,,
+zs_raw_s04,BDV6,5000,2197,151,0.4394,0.45308310991957107,BD,BDV,0.018661811561219845,41,0.018661811561219845,41,0.0009103322712790169,2,0.0031861629494765588,7,41,BD patients,GSM5951807,male,BDV,,,,,,,,,
+zs_raw_s04,HC1,5000,1527,60,0.3054,0.3091093117408907,HC,HC,0.03470857891290111,53,0.03470857891290111,53,0.0026195153896529143,4,0.008513425016371971,13,18,healthy control,GSM5951811,male,HC,,,,,,,,,
+zs_raw_s04,HC10,5000,1132,74,0.2264,0.2298010556232237,HC,HC,0.023851590106007067,27,0.023851590106007067,27,0.00265017667844523,3,0.006183745583038869,7,48,healthy control,GSM5951820,male,HC,,,,,,,,,
+zs_raw_s04,HC2,5000,1120,67,0.224,0.22704236772754915,HC,HC,0.017857142857142856,20,0.017857142857142856,20,0.0,0,0.0026785714285714286,3,47,healthy control,GSM5951812,male,HC,,,,,,,,,
+zs_raw_s04,HC3,5000,776,65,0.1552,0.15724417426545087,HC,HC,0.03221649484536082,25,0.03221649484536082,25,0.002577319587628866,2,0.010309278350515464,8,18,healthy control,GSM5951813,male,HC,,,,,,,,,
+zs_raw_s04,HC4,5000,1551,108,0.3102,0.31704824202780046,HC,HC,0.03417150225660864,53,0.03417150225660864,53,0.0025789813023855577,4,0.009026434558349452,14,53,healthy control,GSM5951814,male,HC,,,,,,,,,
+zs_raw_s04,HC5,5000,895,30,0.179,0.18008048289738432,HC,HC,0.035754189944134075,32,0.035754189944134075,32,0.0011173184357541898,1,0.0111731843575419,10,58,healthy control,GSM5951815,male,HC,,,,,,,,,
+zs_raw_s04,HC6,5000,366,45,0.0732,0.07386478304742684,HC,HC,0.02459016393442623,9,0.02459016393442623,9,0.0,0,0.01092896174863388,4,18,healthy control,GSM5951816,male,HC,,,,,,,,,
+zs_raw_s04,HC7,5000,971,85,0.1942,0.19755849440488302,HC,HC,0.02059732234809475,20,0.02059732234809475,20,0.003089598352214212,3,0.008238928939237899,8,41,healthy control,GSM5951817,male,HC,,,,,,,,,
+zs_raw_s04,HC8,5000,1124,73,0.2248,0.22813070834179014,HC,HC,0.03291814946619217,37,0.03291814946619217,37,0.0,0,0.006227758007117438,7,36,healthy control,GSM5951818,male,HC,,,,,,,,,
+zs_raw_s04,HC9,5000,550,55,0.11,0.11122345803842265,HC,HC,0.02909090909090909,16,0.02909090909090909,16,0.0,0,0.00909090909090909,5,36,healthy control,GSM5951819,male,HC,,,,,,,,,
+obs,PBMC_BD_1,4719,489,325,0.10362364907819453,0.1112881201638598,BD,BD,0.08588957055214724,42,0.10429447852760736,51,0.04294478527607362,21,0.07566462167689161,37,,,,,,30.0,0,0,0,1,0,1,male,1
+obs,PBMC_BD_2,6332,946,48,0.14939987365761212,0.15054105665181414,BD,BD,0.07188160676532769,68,0.08985200845665962,85,0.03805496828752643,36,0.06342494714587738,60,,,,,,31.0,0,1,0,1,0,1,male,1
+obs,PBMC_BD_3,3519,735,101,0.20886615515771526,0.21503803393797544,BD,BD,0.05442176870748299,40,0.08435374149659863,62,0.024489795918367346,18,0.050340136054421766,37,,,,,,58.0,0,1,0,1,0,1,male,1
+obs,PBMC_BD_4,6836,1402,147,0.2050906963136337,0.20959784721184033,BD,BD,0.04065620542082739,57,0.04778887303851641,67,0.015691868758915834,22,0.02781740370898716,39,,,,,,41.0,0,1,0,1,0,1,male,1
+obs,PBMC_HC_1,2504,272,198,0.10862619808306709,0.11795316565481354,HC,HC,0.07720588235294118,21,0.10661764705882353,29,0.04411764705882353,12,0.07352941176470588,20,,,,,,30.0,/,/,/,/,/,/,female,/
+obs,PBMC_HC_2,5749,743,155,0.12923986780309618,0.13282087951376476,HC,HC,0.02557200538358008,19,0.039030955585464336,29,0.013458950201884253,10,0.02288021534320323,17,,,,,,31.0,/,/,/,/,/,/,male,/
+obs,PBMC_HC_3,6546,1306,108,0.19951115184845708,0.20285803044423734,HC,HC,0.062021439509954056,81,0.08116385911179173,106,0.027565084226646247,36,0.05359877488514548,70,,,,,,58.0,/,/,/,/,/,/,male,/
+obs,PBMC_HC_4,5619,473,89,0.08417867948033458,0.08553345388788426,HC,HC,0.040169133192389,19,0.046511627906976744,22,0.012684989429175475,6,0.02536997885835095,12,,,,,,41.0,/,/,/,/,/,/,male,/
+obs_thin_zs,PBMC_BD_1,4719,489,325,0.10362364907819453,0.1112881201638598,BD,BD,0.06748466257668712,33,0.06748466257668712,33,0.028629856850715747,14,0.04294478527607362,21,,,,,,30.0,0,0,0,1,0,1,male,1
+obs_thin_zs,PBMC_BD_2,6332,946,48,0.14939987365761212,0.15054105665181414,BD,BD,0.06871035940803383,65,0.06871035940803383,65,0.02854122621564482,27,0.045454545454545456,43,,,,,,31.0,0,1,0,1,0,1,male,1
+obs_thin_zs,PBMC_BD_3,3519,735,101,0.20886615515771526,0.21503803393797544,BD,BD,0.058503401360544216,43,0.058503401360544216,43,0.013605442176870748,10,0.02040816326530612,15,,,,,,58.0,0,1,0,1,0,1,male,1
+obs_thin_zs,PBMC_BD_4,6836,1402,147,0.2050906963136337,0.20959784721184033,BD,BD,0.026390870185449358,37,0.026390870185449358,37,0.009985734664764621,14,0.016405135520684736,23,,,,,,41.0,0,1,0,1,0,1,male,1
+obs_thin_zs,PBMC_HC_1,2504,272,198,0.10862619808306709,0.11795316565481354,HC,HC,0.06985294117647059,19,0.06985294117647059,19,0.03676470588235294,10,0.051470588235294115,14,,,,,,30.0,/,/,/,/,/,/,female,/
+obs_thin_zs,PBMC_HC_2,5749,743,155,0.12923986780309618,0.13282087951376476,HC,HC,0.02557200538358008,19,0.02557200538358008,19,0.005383580080753701,4,0.012113055181695828,9,,,,,,31.0,/,/,/,/,/,/,male,/
+obs_thin_zs,PBMC_HC_3,6546,1306,108,0.19951115184845708,0.20285803044423734,HC,HC,0.05053598774885146,66,0.05053598774885146,66,0.01454823889739663,19,0.027565084226646247,36,,,,,,58.0,/,/,/,/,/,/,male,/
+obs_thin_zs,PBMC_HC_4,5619,473,89,0.08417867948033458,0.08553345388788426,HC,HC,0.021141649048625793,10,0.021141649048625793,10,0.004228329809725159,2,0.008456659619450317,4,,,,,,41.0,/,/,/,/,/,/,male,/
+obs_thin_lora3,PBMC_BD_1,4719,489,325,0.10362364907819453,0.1112881201638598,BD,BD,0.08588957055214724,42,0.10429447852760736,51,0.04294478527607362,21,0.07157464212678936,35,,,,,,30.0,0,0,0,1,0,1,male,1
+obs_thin_lora3,PBMC_BD_2,6332,946,48,0.14939987365761212,0.15054105665181414,BD,BD,0.0708245243128964,67,0.08562367864693446,81,0.03699788583509514,35,0.06025369978858351,57,,,,,,31.0,0,1,0,1,0,1,male,1
+obs_thin_lora3,PBMC_BD_3,3519,735,101,0.20886615515771526,0.21503803393797544,BD,BD,0.05170068027210884,38,0.08299319727891157,61,0.02040816326530612,15,0.047619047619047616,35,,,,,,58.0,0,1,0,1,0,1,male,1
+obs_thin_lora3,PBMC_BD_4,6836,1402,147,0.2050906963136337,0.20959784721184033,BD,BD,0.04136947218259629,58,0.0456490727532097,64,0.014978601997146932,21,0.026390870185449358,37,,,,,,41.0,0,1,0,1,0,1,male,1
+obs_thin_lora3,PBMC_HC_1,2504,272,198,0.10862619808306709,0.11795316565481354,HC,HC,0.08088235294117647,22,0.10661764705882353,29,0.04411764705882353,12,0.06985294117647059,19,,,,,,30.0,/,/,/,/,/,/,female,/
+obs_thin_lora3,PBMC_HC_2,5749,743,155,0.12923986780309618,0.13282087951376476,HC,HC,0.02288021534320323,17,0.039030955585464336,29,0.013458950201884253,10,0.020188425302826378,15,,,,,,31.0,/,/,/,/,/,/,male,/
+obs_thin_lora3,PBMC_HC_3,6546,1306,108,0.19951115184845708,0.20285803044423734,HC,HC,0.06355283307810107,83,0.0781010719754977,102,0.026033690658499236,34,0.05206738131699847,68,,,,,,58.0,/,/,/,/,/,/,male,/
+obs_thin_lora3,PBMC_HC_4,5619,473,89,0.08417867948033458,0.08553345388788426,HC,HC,0.03805496828752643,18,0.04439746300211417,21,0.012684989429175475,6,0.021141649048625793,10,,,,,,41.0,/,/,/,/,/,/,male,/

paper-releases/pbisc-diffusion/updates/20261004T051658Z-behcet-c1q-lora3/diffusion/dataset/server_1/model8/plans/behcet_c1q_lora3_20261004/out/rules_groups/rule_summary.csv

@@ -0,0 +1,33 @@
+arm,rule,definition,n_monocytes,n_high,fraction_high_pooled_HC,fraction_high_pooled_BD,samples_lt20_high,hc_ties_at_threshold,library_ratio_high_over_other,ifng_response_BD_mean,ifng_response_BD_npos,ifng_response_HC_mean,ifng_response_HC_npos,proinflammatory_BD_mean,proinflammatory_BD_npos,proinflammatory_HC_mean,proinflammatory_HC_npos,phagocytosis_antigen_BD_mean,phagocytosis_antigen_BD_npos,phagocytosis_antigen_HC_mean,phagocytosis_antigen_HC_npos,phagocytosis_antigen_mhcii_fcgr_BD_mean,phagocytosis_antigen_mhcii_fcgr_BD_npos,phagocytosis_antigen_mhcii_fcgr_HC_mean,phagocytosis_antigen_mhcii_fcgr_HC_npos
+zs_raw_s13,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.000000),24653,605,0.030115676106900677,0.020717948717948718,1/19,9726.0,1.2049796985396573,0.10519026393891284,7/9,0.11186269677270366,8/10,-0.2335682169945147,1/9,-0.25325165413968564,0/10,0.12661721428923306,7/9,0.0645566089817994,8/10,1.4729434659904532,9/9,1.0384686030209267,10/10
+zs_raw_s13,A,>= 1 of 3 C1Q genes detected,24653,605,0.030115676106900677,0.020717948717948718,1/19,,1.2049796985396573,0.10519026393891284,7/9,0.11186269677270366,8/10,-0.2335682169945147,1/9,-0.25325165413968564,0/10,0.12661721428923306,7/9,0.0645566089817994,8/10,1.4729434659904532,9/9,1.0384686030209267,10/10
+zs_raw_s13,B,>= 2 of 3 C1Q genes detected,24653,35,0.0018946948544076585,0.001094017094017094,19/19,,1.2743495154155373,0.4230085829212529,6/7,0.043262846702618665,4/9,-0.07490667348023008,3/7,-0.25778304088753196,1/9,0.6191139607072186,7/7,0.271699585861783,8/9,3.455237488131393,7/7,1.579951797427982,9/9
+zs_raw_s13,C,summed C1Q UMI >= 2.0,24653,151,0.0076785001994415635,0.00505982905982906,19/19,,1.2948097750338547,0.23350825629536442,7/9,0.06521076720823693,6/9,-0.21439629405582047,1/9,-0.3249475496929074,0/9,0.20371072978553573,8/9,0.02964541433580465,5/9,1.7389054471797345,9/9,1.176498483233884,8/9
+zs_cal_s13,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.000000),12362,486,0.03521510255944817,0.04260907631694148,10/19,5315.0,1.3979631587643602,0.2744891169813907,9/9,0.3380356100967875,7/10,-0.04048590649607219,2/9,0.06188966686420648,7/10,0.20545966569189092,8/9,0.2461793864876715,10/10,0.9841566803157412,9/9,1.1482484627026388,10/10
+zs_cal_s13,A,>= 1 of 3 C1Q genes detected,12362,486,0.03521510255944817,0.04260907631694148,10/19,,1.3979631587643602,0.2744891169813907,9/9,0.3380356100967875,7/10,-0.04048590649607219,2/9,0.06188966686420648,7/10,0.20545966569189092,8/9,0.2461793864876715,10/10,0.9841566803157412,9/9,1.1482484627026388,10/10
+zs_cal_s13,B,>= 2 of 3 C1Q genes detected,12362,39,0.0030858595026320565,0.0032102728731942215,19/19,,1.3695531718967744,0.12802048528060964,5/8,0.04315671133447388,4/8,-0.0840514117692662,3/8,-0.06794184118607738,2/8,0.4269441124336034,8/8,0.3919972011200598,8/8,1.2336566273818717,7/8,1.9779255910026357,8/8
+zs_cal_s13,C,summed C1Q UMI >= 2.0,12362,132,0.009076057360682519,0.01196556252736028,19/19,,1.416986970011587,0.3142084230782729,9/9,0.21128163586902904,6/9,-0.02698211098306346,2/9,-0.044327791249231634,5/9,0.29062370870397297,8/9,0.45899008055018164,9/9,1.1156931746674361,9/9,1.7802831711871139,9/9
+lora3_raw_s13,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.000000),13378,580,0.03759271746459879,0.04794520547945205,3/19,5709.0,1.342127847733809,0.21907696834421114,8/9,0.34206393343754476,10/10,0.0033740977088800353,6/9,0.0954069138799052,10/10,0.17796739583249332,9/9,0.2978975160164779,10/10,0.9867719207748765,9/9,1.3584727657386955,10/10
+lora3_raw_s13,A,>= 1 of 3 C1Q genes detected,13378,580,0.03759271746459879,0.04794520547945205,3/19,,1.342127847733809,0.21907696834421114,8/9,0.34206393343754476,10/10,0.0033740977088800353,6/9,0.0954069138799052,10/10,0.17796739583249332,9/9,0.2978975160164779,10/10,0.9867719207748765,9/9,1.3584727657386955,10/10
+lora3_raw_s13,B,>= 2 of 3 C1Q genes detected,13378,46,0.0023600809170600135,0.0042976094547408005,19/19,,1.40851518739851,0.1888553779782404,6/8,0.017096764320833614,4/8,-0.015964431094705935,5/8,-0.23457305662224082,2/8,0.39345259374625907,8/8,0.27463451911486697,7/8,1.3075044658225499,8/8,2.4189703649471683,8/8
+lora3_raw_s13,C,summed C1Q UMI >= 2.0,13378,180,0.01095751854349292,0.015444533977974751,19/19,,1.4218143342346101,0.18543774431851662,6/9,0.2711195239834569,8/10,0.016351336620741157,6/9,0.038969145762568436,5/10,0.32652549432974703,9/9,0.39655116909576804,10/10,1.286958713396211,9/9,1.5629874737065872,10/10
+lora3_raw_s04,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.000000),13427,587,0.03458116501594762,0.05100401606425703,4/19,5751.0,1.340011342723447,0.13449173418006097,8/9,0.23423654039133002,9/10,0.00389818722015166,4/9,0.10374312841866953,8/10,0.2167993821068199,9/9,0.3136983604483259,10/10,0.9192462852996037,9/9,1.4658146567766766,10/10
+lora3_raw_s04,A,>= 1 of 3 C1Q genes detected,13427,587,0.03458116501594762,0.05100401606425703,4/19,,1.340011342723447,0.13449173418006097,8/9,0.23423654039133002,9/10,0.00389818722015166,4/9,0.10374312841866953,8/10,0.2167993821068199,9/9,0.3136983604483259,10/10,0.9192462852996037,9/9,1.4658146567766766,10/10
+lora3_raw_s04,B,>= 2 of 3 C1Q genes detected,13427,52,0.0033573946617424877,0.00428380187416332,19/19,,1.4053920616315194,0.22677297476210873,8/9,-0.022829168412476255,3/9,-0.01858704347221649,3/9,-0.028008220941172144,3/9,0.25150742651107005,8/9,0.3744187516172136,9/9,1.352862077532832,9/9,2.2253444895857295,9/9
+lora3_raw_s04,C,summed C1Q UMI >= 2.0,13427,184,0.011415141849924459,0.015528781793842034,18/19,,1.3547524223907816,0.23962640881519023,9/9,0.19256806613897287,9/10,0.0079336004319813,5/9,0.07848969343214447,8/10,0.2586458930683221,9/9,0.4718348014802892,10/10,1.1794719307875157,9/9,1.837393129157686,10/10
+zs_raw_s04,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.000000),24638,586,0.029165001997602878,0.020101189662245316,2/19,9720.0,1.2128082734443284,0.23401998752260406,8/9,0.14487564159592853,6/10,-0.17384543332460098,1/9,-0.3101525181687741,0/10,0.16841426211930158,8/9,0.01615584915595302,6/10,1.4407985369789216,9/9,1.1393173050803171,10/10
+zs_raw_s04,A,>= 1 of 3 C1Q genes detected,24638,586,0.029165001997602878,0.020101189662245316,2/19,,1.2128082734443284,0.23401998752260406,8/9,0.14487564159592853,6/10,-0.17384543332460098,1/9,-0.3101525181687741,0/10,0.16841426211930158,8/9,0.01615584915595302,6/10,1.4407985369789216,9/9,1.1393173050803171,10/10
+zs_raw_s04,B,>= 2 of 3 C1Q genes detected,24638,31,0.0016979624450659209,0.0009571995077259674,19/19,,1.2778648947660503,0.1294306544745201,4/7,0.17400371809882356,3/6,-0.1436462677179521,3/7,-0.18315607148721483,1/6,0.5106579212715837,7/7,0.23330682785301693,5/6,2.089998841317617,7/7,1.4925625611522626,6/6
+zs_raw_s04,C,summed C1Q UMI >= 2.0,24638,138,0.007890531362365161,0.0040339122111308625,19/19,,1.2923753982991795,0.21564243336462613,8/9,0.1474520541105644,8/10,-0.22239946491193915,2/9,-0.358395264599172,1/10,0.23223930427532188,6/9,0.07616652374967374,6/10,1.193990414220998,7/9,0.847871122874764,10/10
+obs,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.553161),6366,347,0.05010737294201861,0.05795072788353863,2/8,0.0,1.418190544491423,0.16993906368608175,4/4,0.21477053616162597,4/4,-0.10508480869148146,0/4,-0.19730733255337246,1/4,0.19248709802285283,4/4,0.08722185861134196,3/4,0.9111779420577537,4/4,0.6630080339583182,4/4
+obs,A,>= 1 of 3 C1Q genes detected,6366,451,0.06657122405153901,0.07418812989921612,0/8,,1.5186499015550035,0.1518249998569311,4/4,0.1708025670542706,4/4,-0.0981192454885574,0/4,-0.1819969415038049,1/4,0.165468081182499,4/4,0.08785292732519934,3/4,0.8747509840956689,4/4,0.649563440387698,4/4
+obs,B,>= 2 of 3 C1Q genes detected,6366,161,0.02290622763063708,0.02715565509518477,4/8,,1.6635700142059984,0.13036220225372416,4/4,0.18362538748309049,3/4,-0.05401180381775738,2/4,-0.15174057004100533,1/4,0.23127231122823175,4/4,0.010971722998060525,1/4,0.8552477895592911,4/4,0.5794678229797893,4/4
+obs,C,summed C1Q UMI >= 2.0,6366,292,0.04259126700071582,0.048432250839865625,2/8,,1.5971419080684228,0.18268462465457486,4/4,0.20708614197411723,4/4,-0.1166332110719507,0/4,-0.17727823944845528,1/4,0.1877075352141816,4/4,0.0741718853425958,3/4,0.9578773840053443,4/4,0.6250217552569585,4/4
+obs_thin_zs,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.000000),6366,292,0.0408017179670723,0.04983202687569989,3/8,2680.0,1.6277981490407252,0.19549150030335266,4/4,0.36226684948499754,4/4,-0.06103546887716758,1/4,-0.10061051772187934,1/4,0.17491916718708855,4/4,0.17543072662108866,3/4,0.9330363994198372,4/4,0.7657385588232786,4/4
+obs_thin_zs,A,>= 1 of 3 C1Q genes detected,6366,292,0.0408017179670723,0.04983202687569989,3/8,,1.6277981490407252,0.19549150030335266,4/4,0.36226684948499754,4/4,-0.06103546887716758,1/4,-0.10061051772187934,1/4,0.17491916718708855,4/4,0.17543072662108866,3/4,0.9330363994198372,4/4,0.7657385588232786,4/4
+obs_thin_zs,B,>= 2 of 3 C1Q genes detected,6366,100,0.012526843235504653,0.018197088465845463,7/8,,1.7552284094846247,0.28017764632561515,4/4,0.19105692356895138,3/4,-0.132592182047946,0/4,-0.10837675022888213,1/4,0.25405666619533335,4/4,0.1990584368223864,3/4,1.4242925492007446,4/4,0.7604800959377334,4/4
+obs_thin_zs,C,summed C1Q UMI >= 2.0,6366,165,0.022548317823908374,0.02855543113101904,4/8,,1.6941383931589413,0.29604768407578885,4/4,0.1258582254193909,3/4,-0.09451151991238606,2/4,-0.09772330509040408,1/4,0.16044747131880424,4/4,0.1293197184742341,3/4,1.0551402434509094,4/4,0.7001293147085004,4/4
+obs_thin_lora3,D,c1q_core score > 95th pct of pooled HC monocytes (= 0.576178),6366,345,0.05010737294201861,0.05739081746920493,2/8,0.0,1.4199167945965958,0.2039489279247289,4/4,0.242982044054937,4/4,-0.09637537835159463,0/4,-0.1838736869294416,1/4,0.176999170806469,4/4,0.08707612035149032,3/4,0.9366171219981406,4/4,0.6966912127859222,4/4
+obs_thin_lora3,A,>= 1 of 3 C1Q genes detected,6366,438,0.06478167501789549,0.0719484882418813,0/8,,1.5203477616635033,0.17632113886765188,4/4,0.1541804804286107,3/4,-0.08104804614767275,0/4,-0.21112162189343886,1/4,0.16938458973576537,4/4,0.07925846403048017,3/4,0.9006095097581508,4/4,0.6513576973921814,4/4
+obs_thin_lora3,B,>= 2 of 3 C1Q genes detected,6366,154,0.02219040801717967,0.025755879059350503,4/8,,1.6689632186394785,0.18074949669962698,3/4,0.22861482035184516,3/4,-0.06532537931016257,1/4,-0.13387433879443134,1/4,0.20868411671970627,4/4,0.0295540970583703,1/4,0.9431202120918158,4/4,0.590589312355157,4/4
+obs_thin_lora3,C,summed C1Q UMI >= 2.0,6366,276,0.04008589835361489,0.04591265397536394,3/8,,1.62085191628856,0.20942889146407878,4/4,0.18855576826424086,4/4,-0.10261369037076176,0/4,-0.16510808915686284,1/4,0.20391531892370937,4/4,0.0764407734311867,3/4,0.9680624564644273,4/4,0.6325412771904462,4/4

paper-releases/pbisc-diffusion/updates/20261004T051658Z-behcet-c1q-lora3/diffusion/dataset/server_1/model8/plans/behcet_c1q_lora3_20261004/out/rules_groups/subtype_modules.csv

@@ -0,0 +1,337 @@
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