Archive 4 checkpoints (1-4)
Browse files- paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fewshot_n5/draw3/lora/RUN.json +150 -0
- paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fewshot_n5/draw4/lora/RUN.json +150 -0
- paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fold0/real_lora/RUN.json +148 -0
- paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fold1/real_lora/RUN.json +148 -0
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fewshot_n5/draw3/lora/RUN.json
ADDED
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{
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"schema": "pbisc_sdd.ft_intradataset.run.v1",
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"source_checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
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| 4 |
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"source_checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
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| 5 |
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"dataset_dir": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis",
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| 6 |
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"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/conditions_raw_fixed.npz",
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"condition_npz_sha256": "ce8b61d7dcd3e62b9e63d52189cfb5bba881f87a661384277a7949a629231cb4",
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"fold": 0,
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"mode": "lora",
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"trainable": {
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"mode": "lora",
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"lora_layers": [
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"time_encoder.0",
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"time_encoder.2",
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"condition_encoder.0",
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"condition_encoder.3",
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"down_blocks.0.input_projection",
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"down_blocks.1.context_projection.1",
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"down_blocks.2.input_projection",
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"down_blocks.2.context_projection.1",
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"down_blocks.3.input_projection",
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"down_blocks.3.context_projection.1",
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"up_blocks.0.input_projection",
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"up_blocks.0.context_projection.1",
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"up_blocks.1.input_projection",
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"up_blocks.1.context_projection.1",
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"up_blocks.2.input_projection",
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"up_blocks.2.context_projection.1",
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"output_trunk.0",
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"value_head",
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"active_head"
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],
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"lora_rank": 16,
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| 37 |
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"lora_alpha": 16.0,
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| 38 |
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"n_trainable": 1296224,
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| 39 |
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"n_total_base": 54185184,
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"trainable_tensors": 44
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},
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| 42 |
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"lr": 0.0005,
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"warmup": 200,
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"batch_size": 256,
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"max_steps": 3000,
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"steps_run": 3000,
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"eval_every": 250,
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| 49 |
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"patience": 8,
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"train_subset": null,
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| 51 |
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"train_donors_file": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/fewshot_n5/draw3/train_donors.txt",
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"fixed_steps": 3000,
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"selected_step": 3000,
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"selected_inner_val_loss": NaN,
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"pretrained_inner_val_loss": NaN,
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"Abd-S57",
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"PHC05",
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],
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"inner_val_rows": [],
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"test_rows_never_loaded_for_training": [
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"Abd-PS07",
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"IC16",
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"Skin-S46",
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| 149 |
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"reload_forward_max_abs_diff": 0.0
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| 150 |
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}
|
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fewshot_n5/draw4/lora/RUN.json
ADDED
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| 1 |
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{
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| 2 |
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"schema": "pbisc_sdd.ft_intradataset.run.v1",
|
| 3 |
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"source_checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
|
| 4 |
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"source_checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
|
| 5 |
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"dataset_dir": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis",
|
| 6 |
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"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/conditions_raw_fixed.npz",
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| 7 |
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"condition_npz_sha256": "ce8b61d7dcd3e62b9e63d52189cfb5bba881f87a661384277a7949a629231cb4",
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| 8 |
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"fold": 0,
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| 9 |
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"mode": "lora",
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"trainable": {
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"mode": "lora",
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| 12 |
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| 13 |
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| 15 |
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| 16 |
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| 17 |
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| 18 |
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| 19 |
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| 20 |
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"down_blocks.1.input_projection",
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| 21 |
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| 22 |
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| 23 |
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"down_blocks.2.context_projection.1",
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| 24 |
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"down_blocks.3.input_projection",
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| 25 |
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"down_blocks.3.context_projection.1",
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| 26 |
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"up_blocks.0.input_projection",
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| 27 |
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"up_blocks.0.context_projection.1",
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| 28 |
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"up_blocks.1.input_projection",
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| 29 |
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"up_blocks.1.context_projection.1",
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| 30 |
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"up_blocks.2.input_projection",
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| 31 |
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"up_blocks.2.context_projection.1",
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| 32 |
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"output_trunk.0",
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| 33 |
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"value_head",
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| 34 |
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"active_head"
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| 35 |
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],
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| 36 |
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"lora_rank": 16,
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"lora_alpha": 16.0,
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| 42 |
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"lr": 0.0005,
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| 43 |
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| 51 |
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"train_donors_file": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/fewshot_n5/draw4/train_donors.txt",
|
| 52 |
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"fixed_steps": 3000,
|
| 53 |
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"selected_step": 3000,
|
| 54 |
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"selected_inner_val_loss": NaN,
|
| 55 |
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"pretrained_inner_val_loss": NaN,
|
| 56 |
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"train_rows": [
|
| 57 |
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"Abd-S102",
|
| 58 |
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"IC23",
|
| 59 |
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"Res-PS22",
|
| 60 |
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"Skin-S142",
|
| 61 |
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"Skin-S46"
|
| 62 |
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|
| 63 |
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"inner_val_rows": [],
|
| 64 |
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"test_rows_never_loaded_for_training": [
|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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"Abd-PS19",
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| 69 |
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| 70 |
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| 71 |
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| 72 |
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| 73 |
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| 74 |
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| 75 |
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| 80 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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|
| 90 |
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| 91 |
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| 92 |
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| 93 |
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|
| 94 |
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| 95 |
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| 96 |
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|
| 97 |
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| 98 |
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|
| 99 |
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|
| 100 |
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| 101 |
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| 102 |
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| 103 |
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| 104 |
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| 105 |
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| 106 |
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|
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|
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|
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| 112 |
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| 113 |
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| 114 |
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|
| 115 |
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| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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| 122 |
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| 123 |
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| 124 |
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|
| 125 |
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| 126 |
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|
| 127 |
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|
| 128 |
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"Res-S40",
|
| 129 |
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"Res-S77",
|
| 130 |
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"Res-S87",
|
| 131 |
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"Skin-S140",
|
| 132 |
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"Skin-S152",
|
| 133 |
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"Skin-S38",
|
| 134 |
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"Skin-S43",
|
| 135 |
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"Skin-S52",
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| 136 |
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"Skin-S74",
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| 137 |
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"Uri-S134",
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| 138 |
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"Uri-S147",
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| 139 |
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|
| 140 |
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| 141 |
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|
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|
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|
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|
| 147 |
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|
| 148 |
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|
| 149 |
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|
| 150 |
+
}
|
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fold0/real_lora/RUN.json
ADDED
|
@@ -0,0 +1,148 @@
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|
| 1 |
+
{
|
| 2 |
+
"schema": "pbisc_sdd.ft_intradataset.run.v1",
|
| 3 |
+
"source_checkpoint": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/runs/f01_6k_1x_seed20260627/checkpoint_epoch_016.pt",
|
| 4 |
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"source_checkpoint_sha256": "8c7cd0e83e2bc19fe03dfcbc084919a1e2f61be8cc8bc12f4caf543dfda91633",
|
| 5 |
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"dataset_dir": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis",
|
| 6 |
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"condition_npz": "/home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/data/ye2026_sepsis/conditions_raw_fixed.npz",
|
| 7 |
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"condition_npz_sha256": "ce8b61d7dcd3e62b9e63d52189cfb5bba881f87a661384277a7949a629231cb4",
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| 8 |
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|
| 9 |
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"mode": "lora",
|
| 10 |
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"trainable": {
|
| 11 |
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"mode": "lora",
|
| 12 |
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"lora_layers": [
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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"down_blocks.2.context_projection.1",
|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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"output_trunk.0",
|
| 33 |
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|
| 34 |
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"active_head"
|
| 35 |
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],
|
| 36 |
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"lora_rank": 16,
|
| 37 |
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|
| 38 |
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|
| 39 |
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|
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|
| 41 |
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| 42 |
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|
| 43 |
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| 44 |
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|
| 45 |
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| 46 |
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| 47 |
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| 48 |
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| 51 |
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}
|
paper-releases/pbisc-diffusion/updates/20261013T144247Z-f01-trunk4x-campaign-launch/diffusion/dataset/server_1/model8/plans/f01_trunk4x_complete_20261013/baseline_records/ye2026_sepsis/fold1/real_lora/RUN.json
ADDED
|
@@ -0,0 +1,148 @@
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