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long-context
needle-in-a-haystack
multi-hop-reasoning
graph-reasoning
citation-graph
benchmark
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| pretty_name: GraphNIAH | |
| # TODO: choose a license that is compatible with the redistributed text (see "Licensing" below). | |
| license: other | |
| language: | |
| - en | |
| task_categories: | |
| - question-answering | |
| - text-classification | |
| tags: | |
| - long-context | |
| - needle-in-a-haystack | |
| - multi-hop-reasoning | |
| - graph-reasoning | |
| - citation-graph | |
| - benchmark | |
| size_categories: | |
| - 1K<n<10K | |
| configs: | |
| - config_name: default | |
| data_files: | |
| - split: test | |
| path: examples.jsonl | |
| <div align="center"> | |
| # GraphNIAH: A Benchmark for Long-Context Reasoning over Real-World Graphs | |
| **Minh-Nam Tran, Abulhair Saparov** | |
| [](https://arxiv.org/abs/2610.41704) | |
| [](https://github.com/trminhnam/GraphNIAH) | |
| [](https://trminhnam.github.io/projects/graphniah/) | |
| [](#citation) | |
| </div> | |
| GraphNIAH is a **needle-in-a-haystack (NIAH) benchmark for long-context, | |
| non-linear reasoning over real citation graphs**. Each example writes a | |
| subgraph of the [Semantic Scholar](https://www.semanticscholar.org/product/api) | |
| citation graph as text, hides it among distracting content in a | |
| 200k–922k-token prompt, and asks whether (or how many) papers are | |
| **reachable** from a source paper through `cites` / `cited_by` relationships. | |
| - **Real data, no contamination:** every paper on the sampled citation paths | |
| was published on or after **April 1, 2026**, after the evaluated models' | |
| knowledge cutoffs. | |
| - **Non-linear reasoning:** the model must _search_ many possible paths, not | |
| just follow one obvious chain. To answer NO, it must check every paper | |
| that is reachable from the source. | |
| - **Verifiable answers:** every answer is computed directly from the subgraph. | |
| There is no human or LLM annotation. | |
| - **Updatable:** the [code](https://github.com/trminhnam/GraphNIAH) builds new examples automatically as new | |
| papers are published. | |
| <p align="center"> | |
| <img src="assets/overview.png" width="420" alt="Three kinds of NIAH tests: single-hop NIAH, linear multi-hop NIAH, and GraphNIAH."> | |
| </p> | |
| ## Tasks | |
| <p align="center"> | |
| <img src="assets/question_types.png" width="860" alt="Examples of the YES/NO, counting, and multiple-choice reachability tasks."> | |
| </p> | |
| Each subgraph has several connected components that share no paper. | |
| Reachability is defined **only by the relationships written in the context**, | |
| not by the full Semantic Scholar graph. | |
| | `reachability_task` | Question | `answer` | | |
| | ------------------- | ------------------------------------------------------------------------------------- | ------------------------------------ | | |
| | `yes-no` | Is target paper _t_ reachable from source paper _s_? | `"YES"` or `"NO"` (balanced) | | |
| | `multiple-choice` | Which of the options is reachable from _s_? Exactly one of four options is reachable. | `"A"`–`"D"` (balanced) | | |
| | `counting` | How many distinct papers are reachable from _s_, not counting _s_? | An integer as a string, e.g. `"169"` | | |
| The appended-"None" variant of multiple choice adds a fifth option, | |
| `E. None of these targets is reachable from the source.`, which is **never** | |
| correct. | |
| ## Dataset structure | |
| ### Files | |
| | File | Content | | |
| | ----------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------ | | |
| | `examples.jsonl` | **8,686 unique examples** (the `test` split), one JSON object per line. Each example is listed once, even when several experiments use it. | | |
| | `pipeline_outputs/experiments.v1_data.2026-04-01.zip` | Full experiment outputs for reproduction (about 4.7 GB). Not part of the `test` split. See [Raw experiment files](#raw-experiment-files). | | |
| GraphNIAH is an evaluation benchmark. It has **no training or validation split**. | |
| ### Fields | |
| | Field | Type | Description | | |
| | ------------------- | ----------------------- | --------------------------------------------------------------------------------------------------------------------------------------------- | | |
| | `qid` | string | Unique example ID (SHA-256 hex). | | |
| | `reachability_task` | string | `yes-no`, `multiple-choice`, or `counting`. | | |
| | `system_prompt` | string | System message sent to the model. | | |
| | `user_prompt` | string | Full user message: question, context (papers + distractors), and answer-format instructions. This is the long field (about 0.2M–0.9M tokens). | | |
| | `question` | string | The question alone, including the options for multiple choice. | | |
| | `answer` | string | Ground-truth answer (see the table above). | | |
| | `question_type` | string | Internal task name: `reachability-yesno`, `reachability-multiple`, `reachability-counting`. | | |
| | `answer_type` | string | Internal answer type, e.g. `REACHABILITY_COUNTING`. | | |
| | `options` | list of `{label, text}` | Multiple-choice options. **Present only for multiple-choice examples.** | | |
| | `config` | object | Settings used to build the example (see below). | | |
| | `token_counts` | object | Prompt length in tokens for each tokenizer: `gpt-5.4` (`o200k_base`), `qwen3.5-397b-a17b`, `gemma-4-31b`. | | |
| | `generator_version` | string | Generator identifier, `create_dataset.v1:4`. | | |
| | `experiments` | list of objects | The experiments that use this example (see below). | | |
| Main `config` keys: | |
| | Key | Meaning | Values | | |
| | ---------------------- | ------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------- | | |
| | `question_depth` | Papers on the true path from source to target (including both ends) | 4, 8, 16, 32 | | |
| | `component_node_count` | Papers in each connected component | 100–250 | | |
| | `question_format` | Task | `reachability-yesno`, `reachability-multiple`, `reachability-counting` | | |
| | `distractor_type` | Distracting content | `code`, `essays`, `books`, `wikipedia`, `disjoint-tree` (called `disjoint-component` in the paper) | | |
| | `context_length` | Target prompt length in tokens | 200000, 500000, 922000 | | |
| | `answer_condition` | Planned label (YES/NO or option letter) | Not set for counting | | |
| | `none_option` | 1 if the "None" option was appended | 0 or 1 | | |
| | `source_qid` | Original example of a converted "None" example | Only when `none_option` is 1 | | |
| | `alpha` | Preferential-attachment parameter of subgraph growth | 0.1 | | |
| | `cutoff_date` | Earliest publication date of the path papers | `2026-04-01` | | |
| The other `config` keys (`traversal_mode`, `needle_type`, `needle_order`, | |
| `num_options`, `yes_ratio`, ...) are fixed construction settings. | |
| Each item of `experiments` has: | |
| | Key | Meaning | | |
| | ---------------- | -------------------------------------------------------------------- | | |
| | `name` | Experiment name (see the next table). | | |
| | `context_length` | Target context length of that experiment. | | |
| | `random_seed` | Seed of that experiment (1). | | |
| | `slot` | Position of the example in that experiment's ordered list (0-based). | | |
| | `path` | The experiment file inside the zip archive (repo-relative path). | | |
| ### Experiments | |
| Each experiment varies **one** variable. All other variables are drawn at | |
| random for each example. | |
| | `experiments[].name` | Context | Varied values | Examples in the list | Evaluated in the paper | | |
| | ---------------------------------------------------------------- | ------- | ----------------------------------- | --------------------: | ---------------------: | | |
| | `question-depth` | 200k | depth 4, 8, 16, 32 | 2,000 (500 per value) | 100 per value | | |
| | `node-count` | 200k | component size 100, 150, 200, 250 | 2,000 (500 per value) | 100 per value | | |
| | `question-format` | 200k | YES/NO, multiple choice, counting | 1,500 (500 per value) | 100 per value | | |
| | `distractor-type` | 200k | 5 distractor types | 2,500 (500 per value) | 100 per value | | |
| | `reasoning_effort` | 200k | low / medium / high (same examples) | 500 | 100 | | |
| | `context_length` | 500k | – | 500 | 50 | | |
| | `context_length` | 922k | – | 500 | 50 | | |
| | `question-format/none-option/reasoning_effort=low/model=<model>` | 200k | appended "None" option | 100 per model | 100 | | |
| The 200k context-length point in the paper reuses the `reasoning_effort` | |
| examples. The three "None"-option lists (`gpt-5.6-luna`, `qwen3.5-35b-a3b`, | |
| `gemini-3.8-flash`) contain the same 100 converted examples. | |
| Some examples appear in more than one list, because identical settings | |
| produce the same example. This is why the 9,800 list entries contain only | |
| 8,686 unique examples. | |
| **Getting the evaluated subset.** Within an experiment, examples are ordered | |
| round-robin over the varied values (slot 0 = value 1, slot 1 = value 2, ...). | |
| So the first _N_ examples of every value are the slots | |
| `0 … N × (number of values) − 1`. The paper evaluated 1,760 distinct examples | |
| in total. | |
| ## Usage | |
| ```python | |
| from datasets import load_dataset | |
| ds = load_dataset("minhnam/GraphNIAH", split="test") | |
| # Number of varied values per experiment, and examples evaluated per value in the paper. | |
| EVALUATED = { | |
| ("question-depth", 200_000): (4, 100), | |
| ("node-count", 200_000): (4, 100), | |
| ("question-format", 200_000): (3, 100), | |
| ("distractor-type", 200_000): (5, 100), | |
| ("reasoning_effort", 200_000): (1, 100), | |
| ("context_length", 500_000): (1, 50), | |
| ("context_length", 922_000): (1, 50), | |
| } | |
| def in_paper_subset(example, name, context_length=200_000): | |
| values, per_value = EVALUATED[(name, context_length)] | |
| return any( | |
| e["name"] == name | |
| and e["context_length"] == context_length | |
| and e["slot"] < values * per_value | |
| for e in example["experiments"] | |
| ) | |
| depth = ds.filter(lambda ex: in_paper_subset(ex, "question-depth")) | |
| print(len(depth)) # 400 | |
| example = depth[0] | |
| messages = [ | |
| {"role": "system", "content": example["system_prompt"]}, | |
| {"role": "user", "content": example["user_prompt"]}, | |
| ] | |
| ``` | |
| **Scoring.** Each prompt asks the model to end with one line | |
| `\answer{...}`. The paper reads the answer as follows and compares it with | |
| `answer`, after light normalization of both sides (for example, whitespace, | |
| Markdown or LaTeX emphasis, trailing punctuation, and letter case): | |
| - YES/NO and counting: the **last** `\answer{}` block. If there is none, the | |
| end of the response (last 100 characters for YES/NO, last 30 for counting) | |
| counts only when it is exactly a label or an integer. | |
| - Multiple choice: one option letter, taken from the whole response (e.g. | |
| `C`, `C.`, `Option C`), from the `\answer{}` block, or from the last | |
| non-empty line. | |
| Responses without a readable answer count as wrong. A simplified version | |
| that reads only the `\answer{}` block: | |
| ```python | |
| import re | |
| def extract_answer(response: str) -> str | None: | |
| matches = re.findall(r"\\answer\{([^{}]*)\}", response) | |
| return matches[-1].strip() if matches else None | |
| correct = extract_answer(model_response) == example["answer"] | |
| ``` | |
| The full scorer, with confidence intervals and per-label breakdowns, is | |
| `run_eval.py` in the [code repository](https://github.com/trminhnam/GraphNIAH). | |
| > [!NOTE] | |
| > The prompts are very long. Most examples need a model with a context | |
| > window of at least 200k tokens; the `context_length` examples need about | |
| > 500k and 922k tokens. Check `token_counts` for your tokenizer before sending | |
| > a request. | |
| ## Raw experiment files | |
| `pipeline_outputs/experiments.v1_data.2026-04-01.zip` holds the complete | |
| outputs behind the paper. Download it and unzip it in the root of the | |
| [code repository](https://github.com/trminhnam/GraphNIAH) to restore the | |
| original folder structure: | |
| ```bash | |
| hf download minhnam/GraphNIAH pipeline_outputs/experiments.v1_data.2026-04-01.zip \ | |
| --repo-type=dataset --local-dir . | |
| unzip pipeline_outputs/experiments.v1_data.2026-04-01.zip | |
| ``` | |
| The archive contains: | |
| ```text | |
| output/data.2026-04-01/hops=<10|22|46|94>/papers-only/ | |
| sampled_paths.json # sampled citation paths (path lengths count papers) | |
| disjoint_path_groups.json # path groups used to build disjoint components | |
| output/experiments.v1/ | |
| pool.jsonl # every built example, with full metadata | |
| inference_pool*.jsonl # cached model responses | |
| cutoff_date=2026-04-01/hops=10-22-46-94/context_length=<200k|500k|922k>/seed=1/alpha=0.1/ | |
| vary=<experiment>/experiment.jsonl # ordered list of qids | |
| vary=<experiment>/experiment.jsonl.settings.json # experiment settings | |
| vary=<experiment>/inference/reasoning_effort=<effort>/model=<model>.json # model responses | |
| vary=<experiment>/eval/reasoning_effort=<effort>/model=<model>.json # scores | |
| ``` | |
| `pool.jsonl` has more fields than `examples.jsonl`. For example, it contains | |
| the rendered needles, the paper IDs of each component, the visible citation | |
| graph, and the source of every distractor. The zip also has results for | |
| `gemini-3.7-flash`, which is not reported in the paper. The alpha-search | |
| pools are not included. | |
| ## How the examples are built | |
| 1. **Backbone:** sample a real undirected citation path of `3k − 2` papers | |
| (all published on or after 2026-04-01). Split it into a distractor path, | |
| the true path from _s_ to _t_ (_k_ papers), and another distractor path. | |
| So at least _k − 1_ search steps are needed from either end. | |
| 2. **Subgraph growth:** add real neighboring papers with a | |
| preferential-attachment rule (α = 0.1), which mimics the scale-free degree | |
| distribution of citation graphs. Every component stays a tree. | |
| 3. **Rendering:** write each paper that cites another paper in its component | |
| as a text block (title, authors, publication information) with an | |
| APA-style reference list. | |
| 4. **Distractors and packing:** add distractors until the target context | |
| length is full, then shuffle all blocks. The distractor types are: | |
| Linux kernel source files (`code`), Paul Graham essays (`essays`), PG-19 | |
| books (`books`), Wikipedia passages (`wikipedia`), or extra citation | |
| components (`disjoint-tree`). | |
| YES-label and NO-label examples differ only in where _t_ is placed, and all | |
| components of an example are sampled in the same way. This prevents | |
| shortcuts such as guessing from topic similarity. | |
| ## Limitations | |
| - The examples cover citation graphs of papers from one Semantic Scholar | |
| release (2026-10-06 download recipe) and one cutoff date (2026-04-01). | |
| Models trained on later data may have seen these papers. | |
| - Paper metadata (titles, authors, venues) comes from Semantic Scholar and | |
| may contain errors. Answers are still correct by construction, because | |
| they are computed from the relationships written in the prompt. | |
| - The paper evaluated 100 examples per value (50 for 500k/922k), so small | |
| accuracy differences are not statistically significant. | |
| - `token_counts` were measured with three tokenizers. Other tokenizers may | |
| give different prompt lengths. | |
| ## Licensing | |
| <!-- TODO: confirm the license terms below before making the dataset public. --> | |
| The prompts contain text from third-party sources, each under its own terms: | |
| | Source | Used for | Terms | | |
| | ------------------------------------------------------------------------------ | ---------------------------- | ----------------------------------------------------------------- | | |
| | [Semantic Scholar Academic Graph](https://www.semanticscholar.org/product/api) | Paper metadata and citations | ODC-BY 1.0 (attribution required) | | |
| | [Linux kernel](https://github.com/torvalds/linux) | `code` distractors | GPL-2.0 | | |
| | [Paul Graham essays](https://www.paulgraham.com) (`sgoel9/paul_graham_essays`) | `essays` distractors | Copyright of the author | | |
| | [PG-19](https://huggingface.co/datasets/emozilla/pg19) | `books` distractors | Public-domain books (Project Gutenberg); dataset under Apache-2.0 | | |
| | [Wikipedia](https://www.wikipedia.org) (`wikipedia-dpr-100w`, Pyserini) | `wikipedia` distractors | CC BY-SA 4.0 | | |
| ## Citation | |
| ```bibtex | |
| @article{tran2026graphniah, | |
| title = {{GraphNIAH}: A Benchmark for Long-Context Reasoning over Real-World Graphs}, | |
| author = {Tran, Minh-Nam and Saparov, Abulhair}, | |
| journal = {arXiv preprint arXiv:2610.41704}, | |
| year = {2026}, | |
| url = {https://arxiv.org/abs/2610.41704} | |
| } | |
| ``` | |
| ## Contact | |
| Please open a discussion on this dataset page or an issue in the | |
| [code repository](https://github.com/trminhnam/GraphNIAH), or contact Minh-Nam Tran (`tran555@purdue.edu`). | |