| { |
| "entities": [ |
| { |
| "label": "anatomical system", |
| "description": "A connected anatomical system made up of multiple organs or structures." |
| }, |
| { |
| "label": "cell", |
| "description": "A cell or cell population mentioned in the text." |
| }, |
| { |
| "label": "cellular component", |
| "description": "A component or structure within a cell." |
| }, |
| { |
| "label": "developing anatomical structure", |
| "description": "An anatomical structure described during development." |
| }, |
| { |
| "label": "dna domain or region", |
| "description": "A named or described domain or region of DNA." |
| }, |
| { |
| "label": "drug or compound", |
| "description": "A drug, chemical compound, or other administered substance." |
| }, |
| { |
| "label": "gene or gene product", |
| "description": "A gene, RNA, protein, or gene product mention." |
| }, |
| { |
| "label": "immaterial anatomical entity", |
| "description": "A non-material anatomical feature such as a boundary or space." |
| }, |
| { |
| "label": "multi-tissue structure", |
| "description": "An anatomical structure composed of more than one tissue type." |
| }, |
| { |
| "label": "organ", |
| "description": "A distinct anatomical organ." |
| }, |
| { |
| "label": "organism", |
| "description": "An organism or organism population." |
| }, |
| { |
| "label": "organism subdivision", |
| "description": "A subdivision or region of an organism." |
| }, |
| { |
| "label": "organism substance", |
| "description": "A naturally occurring substance produced by or found in an organism." |
| }, |
| { |
| "label": "pathological formation", |
| "description": "A pathological anatomical formation, lesion, or disease-associated structure." |
| }, |
| { |
| "label": "protein domain or region", |
| "description": "A domain, region, or site within a protein." |
| }, |
| { |
| "label": "tissue", |
| "description": "A tissue or tissue population." |
| } |
| ], |
| "json_structures": [ |
| { |
| "label": "Acetylation", |
| "description": "Addition of an acetyl group to a biological molecule.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Binding", |
| "description": "Association of two or more biological participants.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| }, |
| { |
| "label": "Theme2", |
| "description": "The primary participant or event affected by the event; Theme2 distinguishes an additional filler of the same role." |
| } |
| ] |
| }, |
| { |
| "label": "Blood_vessel_development", |
| "description": "Formation or development of blood vessels.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "AtLoc", |
| "description": "The location at which the event or its theme is situated." |
| }, |
| { |
| "label": "FromLoc", |
| "description": "The source location from which a participant moves." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Breakdown", |
| "description": "Breakdown or disassembly of a biological structure or material.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Catabolism", |
| "description": "Catabolic processing or degradation of a biological participant.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Cell_division", |
| "description": "Division of a cell into daughter cells.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Cell_proliferation", |
| "description": "Increase in the number of cells through proliferation.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "DNA_methylation", |
| "description": "Addition of methyl groups to DNA.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Death", |
| "description": "Death of a cell, tissue, organism, or other biological participant.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Dephosphorylation", |
| "description": "Removal of a phosphate group from a biological molecule.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Development", |
| "description": "Development or maturation of a biological structure or organism.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Dissociation", |
| "description": "Separation of previously associated biological participants.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Gene_expression", |
| "description": "Expression or production of a gene product.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Growth", |
| "description": "Increase in size or extent of a biological participant.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Localization", |
| "description": "Presence or movement of a biological participant at or to a location.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "AtLoc", |
| "description": "The location at which the event or its theme is situated." |
| }, |
| { |
| "label": "FromLoc", |
| "description": "The source location from which a participant moves." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| }, |
| { |
| "label": "ToLoc", |
| "description": "The destination location to which a participant moves." |
| } |
| ] |
| }, |
| { |
| "label": "Metabolism", |
| "description": "A metabolic process involving biological material.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Negative_regulation", |
| "description": "Regulation that decreases, suppresses, or prevents its theme.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "CSite", |
| "description": "The site on the cause that participates in a regulatory event." |
| }, |
| { |
| "label": "Cause", |
| "description": "The participant or event responsible for causing or regulating the event." |
| }, |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Pathway", |
| "description": "A biological pathway or linked sequence of processes.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Participant", |
| "description": "A participant involved in the event." |
| }, |
| { |
| "label": "Participant2", |
| "description": "A participant involved in the event; Participant2 distinguishes an additional filler of the same role." |
| }, |
| { |
| "label": "Participant3", |
| "description": "A participant involved in the event; Participant3 distinguishes an additional filler of the same role." |
| }, |
| { |
| "label": "Participant4", |
| "description": "A participant involved in the event; Participant4 distinguishes an additional filler of the same role." |
| } |
| ] |
| }, |
| { |
| "label": "Phosphorylation", |
| "description": "Addition of a phosphate group to a biological molecule.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Planned_process", |
| "description": "An experimentally or clinically planned biological process.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Instrument", |
| "description": "An instrument, treatment, or means used in the event." |
| }, |
| { |
| "label": "Instrument2", |
| "description": "An instrument, treatment, or means used in the event; Instrument2 distinguishes an additional filler of the same role." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| }, |
| { |
| "label": "Theme2", |
| "description": "The primary participant or event affected by the event; Theme2 distinguishes an additional filler of the same role." |
| } |
| ] |
| }, |
| { |
| "label": "Positive_regulation", |
| "description": "Regulation that increases, promotes, or enables its theme.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "CSite", |
| "description": "The site on the cause that participates in a regulatory event." |
| }, |
| { |
| "label": "Cause", |
| "description": "The participant or event responsible for causing or regulating the event." |
| }, |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| }, |
| { |
| "label": "Theme2", |
| "description": "The primary participant or event affected by the event; Theme2 distinguishes an additional filler of the same role." |
| } |
| ] |
| }, |
| { |
| "label": "Protein_processing", |
| "description": "Processing or maturation of a protein product.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Regulation", |
| "description": "Regulation whose positive or negative direction is not specified.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "CSite", |
| "description": "The site on the cause that participates in a regulatory event." |
| }, |
| { |
| "label": "Cause", |
| "description": "The participant or event responsible for causing or regulating the event." |
| }, |
| { |
| "label": "Site", |
| "description": "The site on the theme where the event occurs." |
| }, |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Remodeling", |
| "description": "Remodeling or structural reorganization of biological material.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Reproduction", |
| "description": "A reproductive biological process.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Synthesis", |
| "description": "Synthesis or production of a biological participant.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Transcription", |
| "description": "Transcription of a gene or DNA template into RNA.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Translation", |
| "description": "Translation of RNA into a protein product.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| }, |
| { |
| "label": "Ubiquitination", |
| "description": "Addition of ubiquitin to a protein or other biological molecule.", |
| "anchor": "trigger", |
| "anchor_description": "The word or phrase that expresses the event.", |
| "roles": [ |
| { |
| "label": "Theme", |
| "description": "The primary participant or event affected by the event." |
| } |
| ] |
| } |
| ] |
| } |
|
|
