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public String getOntClassId() { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_ontClassId == null) jcasType.jcas.throwFeatMissing("ontClassId", "de.julielab.jules.types.OntClassMention"); return jcasType.ll_cas.ll_getStringValue(addr, ((OntClassMention_Type)jcasType).casFea...
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public void setOntClassId(String v) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_ontClassId == null) jcasType.jcas.throwFeatMissing("ontClassId", "de.julielab.jules.types.OntClassMention"); jcasType.ll_cas.ll_setStringValue(addr, ((OntClassMention_Type)jcasType).casFeat...
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public StringArray getSemanticTypes() { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_semanticTypes == null) jcasType.jcas.throwFeatMissing("semanticTypes", "de.julielab.jules.types.OntClassMention"); return (StringArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_g...
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public void setSemanticTypes(StringArray v) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_semanticTypes == null) jcasType.jcas.throwFeatMissing("semanticTypes", "de.julielab.jules.types.OntClassMention"); jcasType.ll_cas.ll_setRefValue(addr, ((OntClassMention_Type)jcasTy...
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public String getSemanticTypes(int i) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_semanticTypes == null) jcasType.jcas.throwFeatMissing("semanticTypes", "de.julielab.jules.types.OntClassMention"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((On...
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public void setSemanticTypes(int i, String v) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_semanticTypes == null) jcasType.jcas.throwFeatMissing("semanticTypes", "de.julielab.jules.types.OntClassMention"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(a...
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public String getPreferredTerm() { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_preferredTerm == null) jcasType.jcas.throwFeatMissing("preferredTerm", "de.julielab.jules.types.OntClassMention"); return jcasType.ll_cas.ll_getStringValue(addr, ((OntClassMention_Type)jcasTyp...
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public void setPreferredTerm(String v) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_preferredTerm == null) jcasType.jcas.throwFeatMissing("preferredTerm", "de.julielab.jules.types.OntClassMention"); jcasType.ll_cas.ll_setStringValue(addr, ((OntClassMention_Type)jcasType...
java
public Token getMatchedTokens(int i) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_matchedTokens == null) jcasType.jcas.throwFeatMissing("matchedTokens", "de.julielab.jules.types.OntClassMention"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((Ont...
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public void setMatchedTokens(int i, Token v) { if (OntClassMention_Type.featOkTst && ((OntClassMention_Type)jcasType).casFeat_matchedTokens == null) jcasType.jcas.throwFeatMissing("matchedTokens", "de.julielab.jules.types.OntClassMention"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(ad...
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public String generateDrop(String table) { StringBuffer result = new StringBuffer(); result.append("DROP TABLE "); result.append(table); result.append(";\n"); return result.toString(); }
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public Collection<String> listTables() throws SQLException { Collection<String> result = new ArrayList<String>(); DatabaseMetaData dbm = connection.getMetaData(); String types[] = { "TABLE" }; ResultSet rs = dbm.getTables(null, null, "", types); while (rs.next()) { String str = rs.getString("TABLE_NAME"); ...
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public Collection<String> listColumns(String table) throws SQLException { Collection<String> result = new ArrayList<String>(); DatabaseMetaData dbm = connection.getMetaData(); ResultSet rs = dbm.getColumns(null, null, table, null); while (rs.next()) { result.add(rs.getString("COLUMN_NAME")); } return result;...
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public void startUsingModel () { if (replacementThread != null) { try { replacementThread.join(); } catch (InterruptedException e) {} } replacementCanProceed = false; users++; }
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public synchronized void replaceModel (MaxentModel model) { replacementThread = Thread.currentThread(); while (!replacementCanProceed) Thread.yield(); setter.setModel(model); replacementThread = null; }
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public void toIdFile(OutputStream os) throws IOException { BufferedWriter writer = new BufferedWriter(new OutputStreamWriter(os)); for (TrieNodeData<T> child : root.children.values()) { child.writeIds(writer, new char[0]);// recursive } writer.close(); }
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public java.util.List<Glossary> getGlossary() { if (glossary == null) { glossary = new ArrayList<Glossary>(); } return this.glossary; }
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public String getDescriptorName() { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_descriptorName == null) jcasType.jcas.throwFeatMissing("descriptorName", "de.julielab.jules.types.MeshHeading"); return jcasType.ll_cas.ll_getStringValue(addr, ((MeshHeading_Type)jcasType).casFeatCod...
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public void setDescriptorName(String v) { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_descriptorName == null) jcasType.jcas.throwFeatMissing("descriptorName", "de.julielab.jules.types.MeshHeading"); jcasType.ll_cas.ll_setStringValue(addr, ((MeshHeading_Type)jcasType).casFeatCode...
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public String getQualifierName() { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_qualifierName == null) jcasType.jcas.throwFeatMissing("qualifierName", "de.julielab.jules.types.MeshHeading"); return jcasType.ll_cas.ll_getStringValue(addr, ((MeshHeading_Type)jcasType).casFeatCode_q...
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public void setQualifierName(String v) { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_qualifierName == null) jcasType.jcas.throwFeatMissing("qualifierName", "de.julielab.jules.types.MeshHeading"); jcasType.ll_cas.ll_setStringValue(addr, ((MeshHeading_Type)jcasType).casFeatCode_qu...
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public boolean getDescriptorNameMajorTopic() { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_descriptorNameMajorTopic == null) jcasType.jcas.throwFeatMissing("descriptorNameMajorTopic", "de.julielab.jules.types.MeshHeading"); return jcasType.ll_cas.ll_getBooleanValue(addr, ((MeshH...
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public void setDescriptorNameMajorTopic(boolean v) { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_descriptorNameMajorTopic == null) jcasType.jcas.throwFeatMissing("descriptorNameMajorTopic", "de.julielab.jules.types.MeshHeading"); jcasType.ll_cas.ll_setBooleanValue(addr, ((MeshHe...
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public boolean getQualifierNameMajorTopic() { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_qualifierNameMajorTopic == null) jcasType.jcas.throwFeatMissing("qualifierNameMajorTopic", "de.julielab.jules.types.MeshHeading"); return jcasType.ll_cas.ll_getBooleanValue(addr, ((MeshHead...
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public void setQualifierNameMajorTopic(boolean v) { if (MeshHeading_Type.featOkTst && ((MeshHeading_Type)jcasType).casFeat_qualifierNameMajorTopic == null) jcasType.jcas.throwFeatMissing("qualifierNameMajorTopic", "de.julielab.jules.types.MeshHeading"); jcasType.ll_cas.ll_setBooleanValue(addr, ((MeshHeadi...
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public String getRef_id() { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_ref_id == null) jcasType.jcas.throwFeatMissing("ref_id", "ch.epfl.bbp.uima.types.BioVerb"); return jcasType.ll_cas.ll_getStringValue(addr, ((BioVerb_Type)jcasType).casFeatCode_ref_id);}
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public void setRef_id(String v) { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_ref_id == null) jcasType.jcas.throwFeatMissing("ref_id", "ch.epfl.bbp.uima.types.BioVerb"); jcasType.ll_cas.ll_setStringValue(addr, ((BioVerb_Type)jcasType).casFeatCode_ref_id, v);}
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public String getCanonical() { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_canonical == null) jcasType.jcas.throwFeatMissing("canonical", "ch.epfl.bbp.uima.types.BioVerb"); return jcasType.ll_cas.ll_getStringValue(addr, ((BioVerb_Type)jcasType).casFeatCode_canonical);}
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public void setCanonical(String v) { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_canonical == null) jcasType.jcas.throwFeatMissing("canonical", "ch.epfl.bbp.uima.types.BioVerb"); jcasType.ll_cas.ll_setStringValue(addr, ((BioVerb_Type)jcasType).casFeatCode_canonical, v);}
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public String getMatchedText() { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_matchedText == null) jcasType.jcas.throwFeatMissing("matchedText", "ch.epfl.bbp.uima.types.BioVerb"); return jcasType.ll_cas.ll_getStringValue(addr, ((BioVerb_Type)jcasType).casFeatCode_matchedText);}
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public void setMatchedText(String v) { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_matchedText == null) jcasType.jcas.throwFeatMissing("matchedText", "ch.epfl.bbp.uima.types.BioVerb"); jcasType.ll_cas.ll_setStringValue(addr, ((BioVerb_Type)jcasType).casFeatCode_matchedText, v);}
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public FSArray getMatchedTokens() { if (BioVerb_Type.featOkTst && ((BioVerb_Type)jcasType).casFeat_matchedTokens == null) jcasType.jcas.throwFeatMissing("matchedTokens", "ch.epfl.bbp.uima.types.BioVerb"); return (FSArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((BioVerb_Type)j...
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public String getDegree() { if (AdjectiveFeats_Type.featOkTst && ((AdjectiveFeats_Type)jcasType).casFeat_degree == null) jcasType.jcas.throwFeatMissing("degree", "de.julielab.jules.types.AdjectiveFeats"); return jcasType.ll_cas.ll_getStringValue(addr, ((AdjectiveFeats_Type)jcasType).casFeatCode_degree);}
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public void setDegree(String v) { if (AdjectiveFeats_Type.featOkTst && ((AdjectiveFeats_Type)jcasType).casFeat_degree == null) jcasType.jcas.throwFeatMissing("degree", "de.julielab.jules.types.AdjectiveFeats"); jcasType.ll_cas.ll_setStringValue(addr, ((AdjectiveFeats_Type)jcasType).casFeatCode_degree, v);...
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public SourcedToken[] sourcedTokenize(String input,String source) { Token[] tokens = tokenize(input); SourcedToken[] sourcedTokens = new SourcedToken[tokens.length]; for (int i=0; i<tokens.length; i++) { String key = tokens[i].getValue()+"@"+source; if (tokMap.get(ke...
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void setWeight(Token tok, double d) { Double oldWeight = (Double)weightMap.get(tok); totalWeight += oldWeight==null ? d : (d - oldWeight.doubleValue()); weightMap.put(tok,new Double(d)); }
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public StringArray getAcList() { if (DBInfo_Type.featOkTst && ((DBInfo_Type)jcasType).casFeat_acList == null) jcasType.jcas.throwFeatMissing("acList", "de.julielab.jules.types.DBInfo"); return (StringArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((DBInfo_Type)jcasType).casFeat...
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public void setAcList(StringArray v) { if (DBInfo_Type.featOkTst && ((DBInfo_Type)jcasType).casFeat_acList == null) jcasType.jcas.throwFeatMissing("acList", "de.julielab.jules.types.DBInfo"); jcasType.ll_cas.ll_setRefValue(addr, ((DBInfo_Type)jcasType).casFeatCode_acList, jcasType.ll_cas.ll_getFSRef(v));}
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public String getAcList(int i) { if (DBInfo_Type.featOkTst && ((DBInfo_Type)jcasType).casFeat_acList == null) jcasType.jcas.throwFeatMissing("acList", "de.julielab.jules.types.DBInfo"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((DBInfo_Type)jcasType).casFeatCode_acList), i); ...
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public void setAcList(int i, String v) { if (DBInfo_Type.featOkTst && ((DBInfo_Type)jcasType).casFeat_acList == null) jcasType.jcas.throwFeatMissing("acList", "de.julielab.jules.types.DBInfo"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((DBInfo_Type)jcasType).casFeatCode_acList)...
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public int getDay() { if (Date_Type.featOkTst && ((Date_Type)jcasType).casFeat_day == null) jcasType.jcas.throwFeatMissing("day", "de.julielab.jules.types.Date"); return jcasType.ll_cas.ll_getIntValue(addr, ((Date_Type)jcasType).casFeatCode_day);}
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public void setDay(int v) { if (Date_Type.featOkTst && ((Date_Type)jcasType).casFeat_day == null) jcasType.jcas.throwFeatMissing("day", "de.julielab.jules.types.Date"); jcasType.ll_cas.ll_setIntValue(addr, ((Date_Type)jcasType).casFeatCode_day, v);}
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public int getMonth() { if (Date_Type.featOkTst && ((Date_Type)jcasType).casFeat_month == null) jcasType.jcas.throwFeatMissing("month", "de.julielab.jules.types.Date"); return jcasType.ll_cas.ll_getIntValue(addr, ((Date_Type)jcasType).casFeatCode_month);}
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public void setMonth(int v) { if (Date_Type.featOkTst && ((Date_Type)jcasType).casFeat_month == null) jcasType.jcas.throwFeatMissing("month", "de.julielab.jules.types.Date"); jcasType.ll_cas.ll_setIntValue(addr, ((Date_Type)jcasType).casFeatCode_month, v);}
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public Double averagePrecision() { double n = 0; double sumPrecision = 0; for (int i=0; i<pairs.length; i++) { if (correctPair(i)) { n++; double precisionAtRankI = n/(i+1.0); sumPrecision += precisionAtRankI; } ...
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public Double maxF1() { double maxF1 = -Double.MAX_VALUE; double n = 0; for (int i=0; i<pairs.length; i++) { if (correctPair(i)) { n++; double precisionAtRankI = n/(i+1.0); double recallAtRankI = n/numCorrectPairs; ...
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public Double blockerRecall() { double n = 0; for (int i=0; i<pairs.length; i++) { if (correctPair(i)) { n++; } } return new Double(n/numCorrectPairs); }
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public double[] interpolated11PointPrecision() { double[] interpolatedPrecision = new double[11]; int numCorrectAtRankI = 0; for (int i=0; i<pairs.length; i++) { if (correctPair(i)) ++numCorrectAtRankI; double recall = numCorrectAtRankI/((double)numCorrectPairs); ...
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public void graphPrecisionRecall(PrintStream out) throws IOException { /** find interpolated precision - max precision at any rank point after i */ double[] interpolatedPrecision = new double[pairs.length]; double n = numCorrectPairs; double maxPrecision = n/pairs.length; fo...
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public void displayResults(boolean showMismatches,PrintStream out) throws IOException { PrintfFormat fmt = new PrintfFormat("%s %3d %7.2f | %30s | %30s\n"); for (int i=0; i<pairs.length; i++) { if (pairs[i]!=null) { String label = pairs[i].isCorrect() ? "+" : "-"; ...
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public void dumpResults(PrintStream out) throws IOException { PrintfFormat fmt = new PrintfFormat("%7.2f\t%s\t%s\n"); for (int i=0; i<pairs.length; i++) { if (pairs[i]!=null) { String aText = (pairs[i].getA()==null) ? "***" : pairs[i].getA().unwrap(); Str...
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public static void main(String[] args) throws IOException { ch.epfl.bbp.shaded.opennlp.maxent.GISModel m = new SuffixSensitiveGISModelReader(new File(args[0])).getModel(); new SuffixSensitiveGISModelWriter(m, new File(args[1])).persist(); }
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private boolean unknownByPDFExtractor(ArrayList<ArrayList<TextPiece>> wordsByPage) { ArrayList<TextPiece> wordsOfPageOne = wordsByPage.get(0); boolean isUnknownCode = false; int i = 0; float codeSize = 0.0f; while (i<wordsOfPageOne.size()) { codeSize = codeSize + Math.max(wordsOfPa...
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private Vector getDistinctSortedY(Vector distinctY, Vector piecesEachY, ArrayList<TextPiece> wordsOfAPage, TableCandidate tc) { int pieceNumThisPage = wordsOfAPage.size(); float x_columnToGetYs = m_docInfo.getMinX(); float endX_columnToGetYs = m_docInfo.getMiddleX(); if ( (tc.isWideTable()...
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private String getMatchedTabledKeyword(String line) { for (String keyword : Config.TABLE_KEYWORDS) { if (line.startsWith(keyword)) { return keyword; } } return null; }
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private String getMatchedFigureKeyword(String line) { for (String keyword : Config.FIGURE_KEYWORDS) { if (line.startsWith(keyword)) { return keyword; } } return null; }
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private void findFootnoteBeginRow(TableCandidate tc) { for (int i = 0; i < tc.getRows().size(); i++) { TableRow row = tc.getRows().get(i); TextPiece firstCell = row.getCells().get(0); String text = firstCell.getText(); if (text.startsWith("*") || text.startsWith("t ") || ...
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private void determineFootnoteHeading(TableCandidate tc) { /* * Gets the maximal column number based on all table rows before footnote */ int maxColumnNum = 0; for (int i = 0; i < tc.getFootnoteBeginRow(); i++) { TableRow row = tc.getRows().get(i); if (row.getCells().size(...
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public void getTableStructure (int cc, TableCandidate tc, ArrayList<TextPiece> wordsOfAPage) { float minGapBtwColumns = 1000.0f; float[] leftX_tableColumns = tc.getLeftX_tableColumns(); float[] rightX_tableColumns = tc.getRightX_tableColumns(); int YNum = tc.getRows().size(); for (int zz=1; zz<cc;...
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public void getRealHeadingBasedOnCells(int YNum, int cc, TableCandidate tc) { int footnoteLineIndex = tc.getFootnoteBeginRow(); String[][] cells = tc.getCells(); int i=0; while (i<footnoteLineIndex) { int j=0, nonNullCellNum = 0; while (j<cc) { if (cells[i][j]=="") { break; } ...
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public void getColumnHeading(TableCandidate tc) { int headings = tc.getHeadingLineNumber(); String[][] cells = tc.getCells(); String columnHeadings = ""; for (int i=0; i<=headings; i++) { int j = cells[i].length; for (int k=0; k<j; k++) { cells[i][k] = tc.replaceAllSpecia...
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private void addEvents(String sentence) { String[] parts = sentence.split(" "); String outcome = NameFinderME.OTHER; List toks = new ArrayList(); List outcomes = new ArrayList(); for (int pi = 0, pl = parts.length; pi < pl; pi++) { if (parts[pi].equals("<START>")) { outcome = NameFinde...
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public java.util.List<ObjectId> getObjectId() { if (objectId == null) { objectId = new ArrayList<ObjectId>(); } return this.objectId; }
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public java.util.List<Caption> getCaption() { if (caption == null) { caption = new ArrayList<Caption>(); } return this.caption; }
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public java.util.List<Object> getAltTextOrLongDescOrEmail() { if (altTextOrLongDescOrEmail == null) { altTextOrLongDescOrEmail = new ArrayList<Object>(); } return this.altTextOrLongDescOrEmail; }
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public java.util.List<Object> getDispFormulaOrDispFormulaGroupOrChemStructWrap() { if (dispFormulaOrDispFormulaGroupOrChemStructWrap == null) { dispFormulaOrDispFormulaGroupOrChemStructWrap = new ArrayList<Object>(); } return this.dispFormulaOrDispFormulaGroupOrChemStructWrap; }
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public java.util.List<Object> getAttribOrPermissions() { if (attribOrPermissions == null) { attribOrPermissions = new ArrayList<Object>(); } return this.attribOrPermissions; }
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public Constituent getParent() { if (Constituent_Type.featOkTst && ((Constituent_Type)jcasType).casFeat_parent == null) jcasType.jcas.throwFeatMissing("parent", "de.julielab.jules.types.Constituent"); return (Constituent)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((Constituent_Ty...
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public void setParent(Constituent v) { if (Constituent_Type.featOkTst && ((Constituent_Type)jcasType).casFeat_parent == null) jcasType.jcas.throwFeatMissing("parent", "de.julielab.jules.types.Constituent"); jcasType.ll_cas.ll_setRefValue(addr, ((Constituent_Type)jcasType).casFeatCode_parent, jcasType.ll_c...
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public boolean hasNextQuery() { for (int i=0; i<innerLearners.length; i++) { if (innerLearners[i].hasNextQuery()) return true; } return comboHasNextQuery(); }
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public DistanceInstance nextQuery() { // need to save out the i-th field, if it's been prepared. // poll sublearners in random order, to be fair // indices [0,innerLearners.length-1] are the inner learners, // index innerLearners.length is the comboLearner ArrayList indices = new ArrayList(innerLearners.lengt...
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public void addExample(DistanceInstance answeredQuery) { MyMultiDistanceInstance di = asMultiDistanceInstance( answeredQuery ); for (int i=0; i<innerLearners.length; i++) { innerLearners[i].addExample( di.get(i) ); } comboAddExample( di ); }
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public StringWrapperIterator prepare(StringWrapperIterator it) { List multiWrappers = asMultiStringWrapperList(it); if (multiWrappers.size()==0) return new BasicStringWrapperIterator( Collections.EMPTY_SET.iterator() ); MultiStringWrapper prototype = (MultiStringWrapper)multiWrappers.get(0); for (int i=0; i<p...
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public DistanceInstanceIterator prepare(DistanceInstanceIterator it) { List multiDistances = asMultiDistanceInstanceList(it); return new BasicDistanceInstanceIterator( multiDistances.iterator() ); }
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private StringWrapper prepareForLearner(StringWrapper w,StringDistanceLearner learner) { StringWrapperIterator it = new BasicStringWrapperIterator( Collections.singleton(w).iterator() ); return learner.prepare(it).nextStringWrapper(); }
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protected StringDistance[] getInnerDistances() { StringDistance[] innerDistances = new StringDistance[ innerLearners.length ]; for (int j=0; j<innerLearners.length; j++) { innerDistances[j] = innerLearners[j].getDistance(); } return innerDistances; }
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public String getOntologyId() { if (Developmental_Type.featOkTst && ((Developmental_Type)jcasType).casFeat_ontologyId == null) jcasType.jcas.throwFeatMissing("ontologyId", "neuroner.NeuroNER.Developmental"); return jcasType.ll_cas.ll_getStringValue(addr, ((Developmental_Type)jcasType).casFeatCode_ontology...
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private static void showUsage() { System.out.println("BatchExtractor <pdf-dir-path> <output-dir-path> <parser>"); System.out.println("BatchExtractor <pdf-dir-path> <output-dir-path> <parser> --debug"); System.out.println("BatchExtractor <pdf-dir-path> <output-dir-path> <parser> --small"); System.out.printl...
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public List<java.lang.Object> getYearOrMonthOrDayOrSeasonOrMedlineDate() { if (yearOrMonthOrDayOrSeasonOrMedlineDate == null) { yearOrMonthOrDayOrSeasonOrMedlineDate = new ArrayList<java.lang.Object>(); } return this.yearOrMonthOrDayOrSeasonOrMedlineDate; }
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public NGram createNGram(List words) { int[] nums = new int[words.size()]; //ngram needs it own copy of this array so keep making a unique one for each instance. for (int wi=0;wi<nums.length;wi++) { nums[wi] = wordMap.getIndex(words.get(wi)); if (nums[wi] == -1) { return null; } } ...
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private static boolean shouldDehyphenate(String w1, String w2) { boolean dehyphenate = true; String rule = "DH"; // choice by default, dehyphenate if (w1.length() <= 1) { // w1 has only one char dehyphenate = false; rule = "N11"; } else if (w2.length...
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public <R> void visit(String key, Visitor<T, R> visitor) { if (root != null) { visit(key, visitor, null, root); } }
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private <R> void visit(String prefix, Visitor<T, R> visitor, RadixTreeNode<T> parent, RadixTreeNode<T> node) { int numberOfMatchingCharacters = node.getNumberOfMatchingCharacters(prefix); // if the node key and prefix match, we found a match! if (numberOfMatchingCharacte...
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private void formatNodeTo(Formatter f, int level, RadixTreeNode<T> node) { for (int i = 0; i < level; i++) { f.format(" "); } f.format("|"); for (int i = 0; i < level; i++) { f.format("-"); } if (node.isReal() == true) f.format("%s...
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@Override public void formatTo(Formatter formatter, int flags, int width, int precision) { formatNodeTo(formatter, 0, root); }
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private ValueUnitWrapper normalizeSpecialCases(double value, String unit) throws UnknownUnitException { if (unit.equals("mol/dm3")) { return new ValueUnitWrapper(value, MOLAR_NORMALIZED_UNIT); } else { throw new UnknownUnitException(unit); } }
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private ValueUnitWrapper normalizeMassUnit(final double value, final String unit) throws UnknownUnitException { Matcher matcher = mMassUnitPatter.matcher(unit); if (matcher.find()) { double normalizationFactor = 1.0; String numeratorSIPrefix = matcher.group(1); ...
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private ValueUnitWrapper normalizeMolarUnit(final double value, final String unit) throws UnknownUnitException { Matcher matcher = mMolarUnitPattern.matcher(unit); if (matcher.find()) { String siPrefix = matcher.group(1); Double convFactor = getSIFactor(siPrefix); ...
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public StringArray getTokens() { if (FeatureTokens_Type.featOkTst && ((FeatureTokens_Type)jcasType).casFeat_tokens == null) jcasType.jcas.throwFeatMissing("tokens", "ch.epfl.bbp.uima.types.FeatureTokens"); return (StringArray)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr, ((FeatureTo...
java
public void setTokens(StringArray v) { if (FeatureTokens_Type.featOkTst && ((FeatureTokens_Type)jcasType).casFeat_tokens == null) jcasType.jcas.throwFeatMissing("tokens", "ch.epfl.bbp.uima.types.FeatureTokens"); jcasType.ll_cas.ll_setRefValue(addr, ((FeatureTokens_Type)jcasType).casFeatCode_tokens, jcasTy...
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public String getTokens(int i) { if (FeatureTokens_Type.featOkTst && ((FeatureTokens_Type)jcasType).casFeat_tokens == null) jcasType.jcas.throwFeatMissing("tokens", "ch.epfl.bbp.uima.types.FeatureTokens"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((FeatureTokens_Type)jcasType).c...
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public void setTokens(int i, String v) { if (FeatureTokens_Type.featOkTst && ((FeatureTokens_Type)jcasType).casFeat_tokens == null) jcasType.jcas.throwFeatMissing("tokens", "ch.epfl.bbp.uima.types.FeatureTokens"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((FeatureTokens_Type)jc...
java
public String getDictCanon() { if (DictTerm_Type.featOkTst && ((DictTerm_Type)jcasType).casFeat_DictCanon == null) jcasType.jcas.throwFeatMissing("DictCanon", "org.apache.uima.conceptMapper.DictTerm"); return jcasType.ll_cas.ll_getStringValue(addr, ((DictTerm_Type)jcasType).casFeatCode_DictCanon);}
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public void setDictCanon(String v) { if (DictTerm_Type.featOkTst && ((DictTerm_Type)jcasType).casFeat_DictCanon == null) jcasType.jcas.throwFeatMissing("DictCanon", "org.apache.uima.conceptMapper.DictTerm"); jcasType.ll_cas.ll_setStringValue(addr, ((DictTerm_Type)jcasType).casFeatCode_DictCanon, v);}
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public void setMatchedTokens(FSArray v) { if (DictTerm_Type.featOkTst && ((DictTerm_Type)jcasType).casFeat_matchedTokens == null) jcasType.jcas.throwFeatMissing("matchedTokens", "org.apache.uima.conceptMapper.DictTerm"); jcasType.ll_cas.ll_setRefValue(addr, ((DictTerm_Type)jcasType).casFeatCode_matchedTok...
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public TOP getMatchedTokens(int i) { if (DictTerm_Type.featOkTst && ((DictTerm_Type)jcasType).casFeat_matchedTokens == null) jcasType.jcas.throwFeatMissing("matchedTokens", "org.apache.uima.conceptMapper.DictTerm"); jcasType.jcas.checkArrayBounds(jcasType.ll_cas.ll_getRefValue(addr, ((DictTerm_Type)jcasTy...
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public void setCount(Object o,int c) { int[] nums = (int[]) cset.get(o); if (nums != null) { nums[0] = c; } else { cset.put(o,new int[]{c,1}); } }
java
protected Context[] getParameters (int[][] outcomePatterns) throws java.io.IOException { Context[] params = new Context[NUM_PREDS]; int pid=0; for (int i=0; i<outcomePatterns.length; i++) { //construct outcome pattern int[] outcomePattern = new int[outcomePatterns[i].length-1]; ...
java
public Annotation getEnclosingAnnot() { if (TopicToken_Type.featOkTst && ((TopicToken_Type)jcasType).casFeat_enclosingAnnot == null) jcasType.jcas.throwFeatMissing("enclosingAnnot", "ch.epfl.bbp.uima.types.TopicToken"); return (Annotation)(jcasType.ll_cas.ll_getFSForRef(jcasType.ll_cas.ll_getRefValue(addr...
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public void setEnclosingAnnot(Annotation v) { if (TopicToken_Type.featOkTst && ((TopicToken_Type)jcasType).casFeat_enclosingAnnot == null) jcasType.jcas.throwFeatMissing("enclosingAnnot", "ch.epfl.bbp.uima.types.TopicToken"); jcasType.ll_cas.ll_setRefValue(addr, ((TopicToken_Type)jcasType).casFeatCode_enc...
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