ulmshare: align the data card with GitHub
#95
by tristan-deep - opened
- ulmshare/README.md +4 -4
ulmshare/README.md
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@@ -7,7 +7,7 @@ task_categories:
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tags:
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- ultrasound
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- iq
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- ulm
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- super-resolution
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- microbubbles
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<p align="center">
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<img width="500"
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src="https://huggingface.co/datasets/nvidia/
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alt="Ultrasound localization microscopy of the mouse brain." />
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<em style="color: #888;">
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ULM super-resolution reconstruction of a mouse brain.
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## Processing the Dataset
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The acquisitions can be processed with the `reconstruct.py` [script](https://github.com/open-h/
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## Dataset Format
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## Dataset Quantification
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**Current
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- **Acquisitions:** 99, from 61 mice — one zea HDF5 file per acquisition.
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- **Stored HDF5 size:** 20.74 TB (20,735,658,275,478 bytes).
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tags:
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- ultrasound
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- iq
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- open-h-rf
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- ulm
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- super-resolution
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- microbubbles
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<p align="center">
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<img width="500"
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src="https://huggingface.co/datasets/nvidia/Open-H-RF/resolve/main/ulmshare/assets/hero.gif"
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alt="Ultrasound localization microscopy of the mouse brain." />
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<em style="color: #888;">
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ULM super-resolution reconstruction of a mouse brain.
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## Processing the Dataset
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The acquisitions can be processed with the `reconstruct.py` [script](https://github.com/open-h/Open-H-RF/blob/main/datasets/ulmshare/reconstruct.py) as provided in the [Open-H-RF GitHub repository](https://github.com/open-h/Open-H-RF), together with the `pipeline_bmode.yaml` and `pipeline_tissue_suppression.yaml` definitions in this folder and the [zea library](https://github.com/tue-bmd/zea). The script streams the data from the Hugging Face Hub and writes a B-mode, a power-Doppler image and movie, and a ULM density map (the ULM steps live in [`ulm.py`](https://github.com/open-h/Open-H-RF/blob/main/datasets/ulmshare/ulm.py): per 400-frame buffer, buffers with tissue motion are skipped, microbubbles are localized against a per-depth noise floor, linked into tracks with a Hungarian tracker, and the tracks are drawn into a super-resolved density map).
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## Dataset Format
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## Dataset Quantification
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**Current Open-H-RF release:** 103 HDF5 files; 20.74 TB (20,735,658,275,478 bytes) stored; root `zea_version` **0.1.4**. Sizes include all HDF5 contents and use decimal units (MB = 10^6 bytes, GB = 10^9 bytes, TB = 10^12 bytes), not decoded-array memory or original-source download sizes.
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- **Acquisitions:** 99, from 61 mice — one zea HDF5 file per acquisition.
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- **Stored HDF5 size:** 20.74 TB (20,735,658,275,478 bytes).
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