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Datasets:
rlacombe
/
candycrunch-v2-benchmark
Like
0
Tasks:
Other
Size:
100K<n<1M
Tags:
glycomics
mass-spectrometry
msms
glycans
bioinformatics
chemistry
+ 1
License:
cc-by-4.0
Dataset card
Files
Files and versions
xet
Community
main
candycrunch-v2-benchmark
8.91 GB
Ctrl+K
Ctrl+K
1 contributor
History:
31 commits
rlacombe
Publish CandyCrunch v2 Benchmark dataset card and clean schema (NeurIPS 2026)
2a40313
verified
about 8 hours ago
.gitattributes
Safe
2.56 kB
Initial: canonical-CABSEL aligned split v1 (497,751 rows; 378,880 train / 42,097 val / 76,774 test; 0 filenames in train∩test)
6 months ago
README.md
Safe
15.6 kB
Publish CandyCrunch v2 Benchmark dataset card and clean schema (NeurIPS 2026)
about 8 hours ago
X_test.pkl
pickle
Detected Pickle imports (3)
"numpy.ndarray"
,
"numpy.dtype"
,
"numpy.core.multiarray._reconstruct"
What is a pickle import?
1.27 GB
xet
Add X_test.pkl (numerical format, v2-aligned split)
6 months ago
X_train.pkl
6.25 GB
xet
Add X_train.pkl (numerical format, v2-aligned split)
6 months ago
X_val.pkl
pickle
Detected Pickle imports (3)
"numpy.ndarray"
,
"numpy.dtype"
,
"numpy.core.multiarray._reconstruct"
What is a pickle import?
694 MB
xet
Add X_val.pkl (numerical format, v2-aligned split)
6 months ago
glycotrans.tar.gz
142 kB
xet
Add glycotrans.tar.gz: cloned CABSEL/glycotrans v0.1.2 package source for offline import (H200 image lacks git)
6 months ago
reducing_mass.npz
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
1.99 MB
xet
Add reducing_mass.npz: per-split precursor masses aligned to sentences pkl order, for mass-aware eval post-processing
6 months ago
row_manifest.csv
62.1 MB
xet
Initial: canonical-CABSEL aligned split v1 (497,751 rows; 378,880 train / 42,097 val / 76,774 test; 0 filenames in train∩test)
6 months ago
sentences_benchmark.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
411 MB
xet
Publish CandyCrunch v2 Benchmark dataset card and clean schema (NeurIPS 2026)
about 8 hours ago
spectrum_metadata.npz
pickle
Detected Pickle imports (18)
"numpy.dtype"
,
"numpy.ndarray"
,
"numpy.core.multiarray._reconstruct"
,
"numpy.dtype"
,
"numpy.ndarray"
,
"numpy.core.multiarray._reconstruct"
,
"numpy.dtype"
,
"numpy.ndarray"
,
"numpy.core.multiarray._reconstruct"
,
"numpy.dtype"
,
"numpy.ndarray"
,
"numpy.core.multiarray._reconstruct"
,
"numpy.dtype"
,
"numpy.ndarray"
,
"numpy.core.multiarray._reconstruct"
,
"numpy.dtype"
,
"numpy.ndarray"
,
"numpy.core.multiarray._reconstruct"
What is a pickle import?
3.99 MB
xet
Add mode + modification per spectrum (in addition to reducing_mass) for CABSEL-recipe mass check
6 months ago
test_peak_d.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
224 MB
xet
test_peak_d.pkl: per-spectrum peak_d dicts for the v2-aligned test set, needed for fragment-pattern matching in post-processing
6 months ago
vocab_glycobart.txt
Safe
69.1 kB
Initial: canonical-CABSEL aligned split v1 (497,751 rows; 378,880 train / 42,097 val / 76,774 test; 0 filenames in train∩test)
6 months ago
y_test.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
423 kB
xet
Add y_test.pkl (numerical format, v2-aligned split)
6 months ago
y_train.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
2.13 MB
xet
Add y_train.pkl (numerical format, v2-aligned split)
6 months ago
y_val.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
467 kB
xet
Add y_val.pkl (numerical format, v2-aligned split)
6 months ago
