Card: baseline model was trained on most of these scans
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README.md
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@@ -93,6 +93,14 @@ baseline model fails on (for example Dice 0) are kept: a real cohort contains th
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`total` task) on each CT and applied the same measurement and 30 mm rule to its aorta
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mask. Null means the model gave no answer. `_ref` columns use the ground-truth masks,
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`_pred` columns the model's.
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- **Features:** scanner and acquisition fields come from the TotalSegmentator metadata
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(v3.0.0 adds slice thickness). Contrast phase is predicted. `study_description` and
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`protocol_name` are **synthetic**: the source has none, so they are drawn from a
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`total` task) on each CT and applied the same measurement and 30 mm rule to its aorta
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mask. Null means the model gave no answer. `_ref` columns use the ground-truth masks,
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`_pred` columns the model's.
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- **The baseline model has seen most of these scans.** TotalSegmentator was trained on
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this dataset: of the 567 scans, its own split (`totalsegmentator_split` in
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`tables/cases.parquet`) marks 491 as training, 21 as validation and 55 as test. So
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`_pred` results are not an independent test of the model. Here it scores about the same
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on its test scans as on its training scans (aorta Dice 0.968 vs 0.967; AAA agreement 98%
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vs 99%), but the test scans include only 4 AAA cases, too few to rule out a difference.
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For a fair baseline, use the `test` scans; if you train your own model on part of this
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data, compare it with TotalSegmentator on scans neither model was trained on.
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- **Features:** scanner and acquisition fields come from the TotalSegmentator metadata
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(v3.0.0 adds slice thickness). Contrast phase is predicted. `study_description` and
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`protocol_name` are **synthetic**: the source has none, so they are drawn from a
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