id large_stringlengths 23 28 | sequence large_stringlengths 8 15.3k | targets large listlengths 8.34k 8.34k | split large_stringclasses 1
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interpro_domain_train_0 | QVQLVQSGGGLVQHGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSGISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNRLRAEDTAVYYCARDNGWELTDWYFDLWGRGTMVTVSSGGGGSGGGGSGGGGSDIQMTQSPSTLSASIGDRVTITCRASEGIYHWLAWYQQKPGKAPKLLIYKASSLASGAPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQYSNYPLTFGGGTKLEIK | [
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interpro_domain_train_1 | MDMRVPAQLLGLLLLWLSGARCDIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | [
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interpro_domain_train_2 | MDMRVPAQLLGLLLLWLSGARCDIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | [
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interpro_domain_train_3 | MDMRVPAQLLGLLLLWLRGARCDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | [
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interpro_domain_train_4 | MDMRVPAQLLGLLLLWLPGAKCDIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | [
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interpro_domain_train_5 | MEFGLSWLFLVAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | [
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interpro_domain_train_6 | MDMRVPAQLLGLLLLWFPGARCDIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | [
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interpro_domain_train_7 | MDMRVLAQLLGLLLLCFPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | [
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interpro_domain_train_8 | MDMMVPAQLLGLLLLWFPGSRCDIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | [
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interpro_domain_train_9 | MEAPAQLLFLLLLWLPDTTGEIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | [
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interpro_domain_train_10 | MELGLCWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | [
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End of preview. Expand in Data Studio
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Check out the documentation for more information.
interpro_domain
Protein-level multi-label dataset sourced from InterPro entry metadata and UniProtKB protein-to-InterPro cross-references.
Intended use
Protein domain annotation prediction from sequence. This evaluates recovery of curated InterPro classifications, not an experimental assay result.
Source and labels
- InterPro metadata:
https://ftp.ebi.ac.uk/pub/databases/interpro/current_release/entry.list - UniProt REST API:
https://rest.uniprot.org/uniprotkb/stream - Card generated (UTC):
2026-09-25 - UniProt query:
(organism_id:9606) - UniProt TSV fields:
accession,sequence,xref_interpro - InterPro entry type:
Domain - Keep entries observed in at least 2 proteins.
targetsis a multi-hot vector ordered by InterPro accession. Accession, display name, and type are recorded inlabel_vocabulary.json.- Proteins without a retained entry for this category are dropped.
Splits
Whole MMseqs2 easy-linclust clusters are assigned to splits targeting
{'train': 0.8, 'validation': 0.1, 'test': 0.1}, with minimum identity
0.3, minimum coverage
0.8, and
1 thread(s). Seed: 1957723.
The optional maximum sequence length is None and is
applied after splitting.
Split sizes
test: 14544 rowstrain: 116347 rowsvalidation: 14544 rows
Vocabulary size: 8343.
Dataset statistics
stats.json at the dataset root contains row counts by split,
columns, and SeqKit sequence-length metrics.
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