WSI_Packets / scripts /packets /build-patch-sets.sh

Add files using upload-large-folder tool

6e15b0d verified 3 days ago

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#!/bin/bash
cd "$(dirname "$0")/../../.."
OUT=data/packets/patch/sets
PY=/home/than-minh/.local/bin/python
mkdir -p $OUT/logs
for enc in conch_v1 keep musk; do
  nice -n 19 $PY -u experiments/miscellaneous/packets/patch_sets.py --encoder $enc --datasets BRAIN_SUBTYPE_5 BRAIN_SUBTYPE_6 BRACS_fine BRACS_coarse --out-dir $OUT --threads 2 > $OUT/logs/$enc.log 2>&1 || echo "FAILED $enc" >> $OUT/logs/failed.txt
done
echo done > $OUT/logs/done.flag

	#!/bin/bash
	cd "$(dirname "$0")/../../.."
	OUT=data/packets/patch/sets
	PY=/home/than-minh/.local/bin/python
	mkdir -p $OUT/logs
	for enc in conch_v1 keep musk; do
	nice -n 19 $PY -u experiments/miscellaneous/packets/patch_sets.py --encoder $enc --datasets BRAIN_SUBTYPE_5 BRAIN_SUBTYPE_6 BRACS_fine BRACS_coarse --out-dir $OUT --threads 2 > $OUT/logs/$enc.log 2>&1 \|\| echo "FAILED $enc" >> $OUT/logs/failed.txt
	done
	echo done > $OUT/logs/done.flag