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thesis-data / CONTRACT.md
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Data layout v4 (2026-10-01), read-only; fixes ship as a new version

Same content and rules as release v3.1 (old layout, /run/media/than-minh/Thesis/Thesis-datasets/releases/2026-10-01-v3.1/CONTRACT.md, which carries the v2 and v3 text). Changes in v4:

  1. Layout: <dataset>/{runtime,scorer,latents}; no dev/, final/, main/ view folders. Meta release=v4.
  2. BRACS: one catalog on the final protocol (bank 460 = train+val, query 87 = test) plus table split_info and bracs/slides.csv. The dev protocol (bank train 395, query val 65) is derived by masking val; the old dev catalogs are in the archived v3.1.
  3. latents_index.path is relative to the dataset folder (latents/<slide>.pt); sha256 is filled (tensor-file hash).
  4. Not carried over (archived): GDC report PDFs and OCR text (the report text is in the TCGA bank catalog as path_report_full / path_report_diagnosis), logs, staged knowledge work and scripts, the latents manifest.
  5. Everything under <dataset>/scorer/ is scorer/owner only.