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https://huggingface.co/datasets/tjtrans/FORESEE/resolve/main/tools/data_tools.py
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12.1 kB
| import numpy as np | |
| from sklearn.preprocessing import StandardScaler | |
| import torch | |
| from Dataset import STDataset,TrafficDataset | |
| import os | |
| # from Dataset import Auxility_dataset | |
| import numpy as np | |
| from torch.utils.data import Dataset, DataLoader,SubsetRandomSampler | |
| from datetime import datetime | |
| import matplotlib.pyplot as plt | |
| from sklearn.metrics import mean_absolute_error, mean_squared_error | |
| import yaml,logging | |
| # # from models.GWNET import gwnet | |
| # from models.MTGNN import MTGNN | |
| # from models import TGCN,ASTGCNCommon,CCRNN,STGCN,AGCRN,STTN,DCRNN | |
| import copy | |
| class CustomStandardScaler: | |
| def __init__(self, axis=None): | |
| self.axis = axis | |
| self.mean = None | |
| self.std = None | |
| def fit(self, data): | |
| if self.axis is None: | |
| # If axis is not specified, calculate mean and std over the entire data | |
| self.mean = np.mean(data) | |
| self.std = np.std(data) | |
| else: | |
| # Calculate mean and std along the specified axis | |
| self.mean = np.mean(data, axis=self.axis) | |
| self.std = np.std(data, axis=self.axis) | |
| def transform(self, data): | |
| if self.mean is None or self.std is None: | |
| raise ValueError("Scaler has not been fitted. Call 'fit' method first.") | |
| # Standardize the data using the calculated mean and std | |
| standardized_data = (data - self.mean) / self.std | |
| return standardized_data | |
| def inverse_transform(self, standardized_data): | |
| if self.mean is None or self.std is None: | |
| raise ValueError("Scaler has not been fitted. Call 'fit' method first.") | |
| # Reverse the standardization process | |
| original_data = standardized_data * self.std + self.mean | |
| return original_data | |
| def to_node_day_hour(arr): | |
| """Normalize raw npy to (nodes, days, 24, feat). Hour-first 3D is (hours, nodes, feat).""" | |
| if arr.ndim == 4: | |
| return arr | |
| if arr.ndim != 3: | |
| raise ValueError(f"Expected 3D or 4D array, got shape {arr.shape}") | |
| hours = (arr.shape[0] // 24) * 24 | |
| arr = arr[:hours] | |
| n_nodes = arr.shape[1] | |
| return arr.transpose(1, 0, 2).reshape(n_nodes, -1, 24, arr.shape[2]) | |
| def paper_valid_grid(train_data): | |
| """Paper Sec 5.1.1: drop zones whose training-period mean demand is <= 2.""" | |
| train4 = to_node_day_hour(train_data) | |
| return np.where(train4.mean(axis=(1, 2, 3)) > 2)[0] | |
| _PKG_ROOT = os.path.abspath(os.path.join(os.path.dirname(__file__), '..')) | |
| PAPER_DATASET_ROOT = os.path.join(_PKG_ROOT, 'dataset') | |
| PAPER_MODEL_ROOT = os.path.join(_PKG_ROOT, 'saved_models') | |
| def resolve_dataset_dir(config): | |
| """Prefer the original paper dump when present; otherwise ./dataset/<name>.""" | |
| name = config['dataset_name'] | |
| if config.get('dataset_root'): | |
| return os.path.join(config['dataset_root'], name) | |
| paper_dir = os.path.join(PAPER_DATASET_ROOT, name) | |
| if os.path.isfile(os.path.join(paper_dir, 'train.npy')): | |
| return paper_dir | |
| return os.path.join('dataset', name) | |
| def load_paper_adj(config, valid_grid): | |
| ds_dir = config.get('resolved_dataset_dir') or resolve_dataset_dir(config) | |
| adj = np.load(os.path.join(ds_dir, 'adj_mx.npy')).astype(np.float32) | |
| n = int(np.max(valid_grid)) + 1 | |
| if adj.shape[0] < n: | |
| padded = np.zeros((n, n), dtype=np.float32) | |
| padded[: adj.shape[0], : adj.shape[1]] = adj | |
| adj = padded | |
| return adj[valid_grid][:, valid_grid] | |
| def resolve_model_path(model_name, dataset_name, config=None): | |
| if config and config.get('model_path'): | |
| return config['model_path'] | |
| paper = os.path.join(PAPER_MODEL_ROOT, f'{model_name}_{dataset_name}_final_model.pth') | |
| local = os.path.join('saved_models', f'{model_name}_{dataset_name}_final_model.pth') | |
| if os.path.isfile(paper): | |
| return paper | |
| return local | |
| def filter_data(data): | |
| daily_totals = np.sum(data, axis=(0,2, 3)) | |
| # 找到总数不为0的天的索引 | |
| valid_days_idx = np.where(daily_totals > 0)[0] | |
| # 根据索引创建新的data数组 | |
| return data[:,valid_days_idx] | |
| def time_add(data, week_start, interval=5, weekday_only=False, holiday_list=None, day_start=0, hour_of_day=24): | |
| # day and week | |
| if weekday_only: | |
| week_max = 5 | |
| else: | |
| week_max = 7 | |
| time_slot = hour_of_day * 60 // interval | |
| day_data = np.zeros_like(data) | |
| week_data = np.zeros_like(data) | |
| holiday_data = np.zeros_like(data) | |
| day_init = day_start | |
| week_init = week_start | |
| holiday_init = 1 | |
| for index in range(day_start//interval, data.shape[0]+day_start//interval): | |
| if (index) % time_slot == 0 and index!=0: | |
| day_init = 0 | |
| day_init = day_init + interval | |
| if (index) % time_slot == 0 and index !=0: | |
| week_init = week_init + 1 | |
| if week_init > week_max: | |
| week_init = 1 | |
| if day_init < 6: | |
| holiday_init = 1 | |
| else: | |
| holiday_init = 2 | |
| day_data[index:index + 1, :] = day_init | |
| week_data[index:index + 1, :] = week_init | |
| holiday_data[index:index + 1, :] = holiday_init | |
| if holiday_list is None: | |
| k = 1 | |
| else: | |
| for j in holiday_list : | |
| holiday_data[j-1 * time_slot:j * time_slot, :] = 2 | |
| return day_data, week_data, holiday_data | |
| def load_data( config): | |
| # List all the available files in the data directory | |
| # Sort the files by name to ensure chronological order | |
| # config=vars(config) | |
| ds_dir = resolve_dataset_dir(config) | |
| config['resolved_dataset_dir'] = ds_dir | |
| train_data = np.load(os.path.join(ds_dir, 'train.npy')) | |
| val_data = np.load(os.path.join(ds_dir, 'val.npy')) | |
| test_data = np.load(os.path.join(ds_dir, 'test.npy')) | |
| # print(train_data.shape) | |
| # Paper Sec 5.1.1: keep zones with training-period mean demand > 2. | |
| # Accept both hour-first 3D (hours, nodes, 2) and 4D (nodes, days, 24, 2). | |
| train_data = to_node_day_hour(train_data) | |
| val_data = to_node_day_hour(val_data) | |
| test_data = to_node_day_hour(test_data) | |
| valid_grid = paper_valid_grid(train_data) | |
| train_data, val_data, test_data = train_data[valid_grid], val_data[valid_grid], test_data[valid_grid] | |
| scaler = CustomStandardScaler() # Specify the axis over which to calculate mean and std | |
| scaler.fit(train_data) | |
| # Standardize the data | |
| train_data = scaler.transform(train_data) | |
| val_data = scaler.transform(val_data) | |
| test_data = scaler.transform(test_data) | |
| if 'tc_num_heads' in config.keys(): | |
| test_data=test_data.transpose(1,2,0,3) | |
| test_data=test_data.reshape(test_data.shape[0]*test_data.shape[1],-1) | |
| week_start = 3 | |
| interval = 5 | |
| week_day = 7 | |
| holiday_list = None | |
| interval = 60 | |
| day_data, week_data, holiday_data = time_add(test_data, week_start, interval=interval, weekday_only=False, holiday_list=holiday_list) | |
| test_data= np.expand_dims(test_data, axis=-1) | |
| day_data = np.expand_dims(day_data, axis=-1).astype(int) | |
| week_data = np.expand_dims(week_data, axis=-1).astype(int) | |
| # holiday_data = np.expand_dims(holiday_data, axis=-1).astype(int) | |
| test_data = np.concatenate([test_data, day_data, week_data], axis=-1) | |
| train_data=train_data.transpose(1,2,0,3) | |
| train_data=train_data.reshape(train_data.shape[0]*train_data.shape[1],-1) | |
| day_data, week_data, holiday_data = time_add(train_data, 2, interval=interval, weekday_only=False, holiday_list=holiday_list) | |
| train_data= np.expand_dims(train_data, axis=-1) | |
| day_data = np.expand_dims(day_data, axis=-1).astype(int) | |
| week_data = np.expand_dims(week_data, axis=-1).astype(int) | |
| # holiday_data = np.expand_dims(holiday_data, axis=-1).astype(int) | |
| train_data = np.concatenate([train_data, day_data, week_data], axis=-1) | |
| return train_data, val_data, test_data, scaler,valid_grid | |
| def get_datasets( config): | |
| # Load and preprocess the data using load_data function | |
| train_data, val_data, test_data, scaler,valid_gird = load_data( config) | |
| # if config.model=='iVAE': | |
| # train_dataset=iVAE.iVAEDataset(train_data,config) | |
| # val_dataset=iVAE.iVAEDataset(val_data,config) | |
| # test_dataset=iVAE.iVAEDataset(test_data,config) | |
| # return train_dataset, val_dataset, test_dataset, scaler,valid_gird | |
| # Create datasets using the STDataset class | |
| train_dataset = STDataset(train_data, config) | |
| val_dataset = STDataset(val_data, config,if_train=False,index=len(train_dataset)//(30*24)) | |
| if 'tc_num_heads' in config.keys(): | |
| test_dataset=TrafficDataset(test_data,batch_size=1) | |
| train_dataset=TrafficDataset(train_data,batch_size=1) | |
| else: | |
| test_dataset = STDataset(test_data, config,if_train=False,index=len(train_dataset)//(30*24)) | |
| return train_dataset, val_dataset, test_dataset, scaler,valid_gird | |
| def expand_adjacency_matrix(adj_matrix, m): | |
| n = adj_matrix.shape[0] | |
| if m < n: | |
| m=n | |
| expanded_adj_matrix = np.zeros((m, m), dtype=int) | |
| expanded_adj_matrix[:n, :n] = adj_matrix | |
| # Add self-loops | |
| np.fill_diagonal(expanded_adj_matrix, 1) | |
| return expanded_adj_matrix-np.eye(len(expanded_adj_matrix)) | |
| from typing import Union | |
| class Dataset_Recent(Dataset): | |
| def __init__(self, dataset, gap: Union[int, tuple, list], recent_num=1, take_post=0, strength=0, **kwargs): | |
| super().__init__() | |
| self.more = gap - recent_num + 1 | |
| self.dataset = dataset | |
| self.gap = gap | |
| self.recent_num = recent_num | |
| if strength: | |
| print("Modify time series with strength =", strength) | |
| for i in range(3, len(self.dataset.data_y)): | |
| self.dataset.data_x[i] *= 1 + 0.1 * (i // 24 % strength) | |
| def _stack(self, data): | |
| if isinstance(data[0], np.ndarray): | |
| return np.vstack(data) | |
| else: | |
| return torch.stack(data, 0) | |
| def __getitem__(self, index): | |
| if self.recent_num == 1: | |
| return self.dataset[index], self.dataset[index + self.gap] | |
| else: | |
| current_data = self.dataset[index + self.gap + self.recent_num - 1] | |
| if not isinstance(current_data, tuple): | |
| recent_data = tuple(self.dataset[index + n] for n in range(self.recent_num)) | |
| recent_data = self._stack(recent_data) | |
| return current_data, recent_data | |
| else: | |
| recent_data = tuple([] for _ in range(len(current_data))) | |
| for past in range(self.recent_num): | |
| for j, past_data in enumerate(self.dataset[index + past]): | |
| recent_data[j].append(past_data) | |
| recent_data = tuple(self._stack(recent_d) for recent_d in recent_data) | |
| return recent_data, current_data | |
| def __len__(self): | |
| return len(self.dataset) - self.more | |
| # def align_data(data): | |
| # # align data to have the same mean and variance of data[:,:360,:,:] | |
| # #data (node_number,day_number,24,2) | |
| # target_mean = data[:,-365:].mean() | |
| # target_std = data[:,:-365:].std() | |
| # day_number=data.shape[1] | |
| # for i in range(day_number//365): | |
| # this_mean = data[:,i*365:(i+1)*365,:,:].mean() | |
| # this_std = data[:,i*365:(i+1)*365,:,:].std() | |
| # data[:,i*365:(i+1)*365,:,:] = (data[:,i*365:(i+1)*365,:,:]-this_mean)/this_std*target_std+target_mean | |
| # return data | |
| # if __name__ == '__main__': | |
| # # Test the functions | |
| # with open('models\config2.yaml', 'r') as f: | |
| # config = yaml.safe_load(f) | |
| # train_data, val_data, test_data, scaler,valid_grid=load_data(config['data_dir'],config) | |
| # align_data(train_data) |