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2.97 kB
| # For reference on dataset card metadata, see the spec: https://github.com/huggingface/hub-docs/blob/main/datasetcard.md?plain=1 | |
| # Doc / guide: https://huggingface.co/docs/hub/datasets-cards | |
| {} | |
| # Dataset Card for Dataset Name | |
| This dataset is a collection of colour pointcloud sequences, captured from | |
| ## Dataset Details | |
| ### Dataset Description | |
| <!-- Provide a longer summary of what this dataset is. --> | |
| - **Curated by:** Connor Daly, Mechatronics in Medicine, Imperial College London | |
| - **License:** CC BY 4.0 (Creative Commons Attribution) | |
| ### Dataset Sources [optional] | |
| <!-- Provide the basic links for the dataset. --> | |
| - **Repository:** [SpineAlign](https://github.com/condog101/SpineAlign) | |
| - **Paper [optional]:** [Coming soon] | |
| ## Dataset Structure | |
| The test sequences as used in our MICCAI paper were: [3wdFkKgv_20241015_164758, 9hY9tyUS_20241016_140027, 4e5qD5n5_20241023_090919, 4rCfpioZ_20241129_093024] | |
| [More Information Needed] | |
| ## Dataset Creation | |
| ### Curation Rationale | |
| This dataset was created with the motivation of developing markerless tracking systems for spine surgery. | |
| [More Information Needed] | |
| ### Source Data | |
| The source of the data is lumbar spine surgeries taking place at Humanitas Research Hospital. | |
| #### Data Collection and Processing | |
| <!-- This section describes the data collection and processing process such as data selection criteria, filtering and normalization methods, tools and libraries used, etc. --> | |
| [More Information Needed] | |
| #### Who are the source data producers? | |
| The dataset was produced from the caseload of several neuro-surgeons working at Humanitas Research Hopsital (Rozzano). The cases are lumbar surgeries. | |
| The .pcd files were captured by an Azure Kinect camera. | |
| ### Annotations [optional] | |
| Further annotations are contained within the CT_DATA folder of the accompanying code repository. | |
| #### Annotation process | |
| The annotations were created in a multi-step process, first coarsely by the operating surgeon. | |
| This was used to roughly align a preoperative CT/MRI mesh with a reference frame for a particular sequence. | |
| We then use the SpineAlign process, described in the paper, to iteratively deform and transform the mesh to better align with | |
| the reference frame. Then points in the sequence are labelled positive (1) if within 50 mm of the registered mesh, otherwise negative (0). | |
| Following the reference frame alignment, this is repeated for other frames, using ICP to keep the deformed mesh aligned. | |
| #### Who are the annotators? | |
| The annotators are surgeons of Humanitas Research hospital in Milan, alongside researchers at the Hamlyn Centre, of Imperial College London. | |
| #### Personal and Sensitive Information | |
| No personal identifying information is contained in this dataset | |
| ## Citation [optional] | |
| If using this dataset, please cite the original paper ("Towards Markerless Intraoperative Tracking of Deformable Spine Tissue") | |
| **BibTeX:** | |
| ## Dataset Card Contact | |
| cd1723@ic.ac.uk |