| { | |
| "architecture": "odesign", | |
| "constraint_embeddings": { | |
| "dropout": 0.25, | |
| "hidden_size": 64, | |
| "max_distance": 50.75, | |
| "min_distance": 3.25, | |
| "num_blocks": 2, | |
| "num_distogram_bins": 39 | |
| }, | |
| "denoiser": { | |
| "atom_hidden_size": 128, | |
| "atom_pair_hidden_size": 16, | |
| "num_atom_decoder_attention_heads": 4, | |
| "num_atom_decoder_blocks": 3, | |
| "num_atom_encoder_attention_heads": 4, | |
| "num_atom_encoder_blocks": 3, | |
| "num_key_atoms": 128, | |
| "num_query_atoms": 32, | |
| "num_token_encoder_attention_heads": 16, | |
| "num_token_encoder_blocks": 24, | |
| "sigma_data": 16.0, | |
| "token_hidden_size": 768 | |
| }, | |
| "max_relative_chain": 2, | |
| "max_relative_residue": 32, | |
| "pair_size": 128, | |
| "pairwise": { | |
| "bond_hidden_size": 128, | |
| "num_distogram_bins": 64 | |
| }, | |
| "single_size": 384, | |
| "trunk": { | |
| "msa_dropout": 0.15, | |
| "num_msa_stages": 4, | |
| "num_pairformer_blocks": 48, | |
| "pair_dropout": 0.25, | |
| "pairformer_dropout": 0.25 | |
| } | |
| } | |