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Oct 16

A minimal model for rate-induced tipping to extinction

Rate-induced tipping ("R-tipping") in ecological modelling is characterised by too-rapid change of an environmental parameter causing collapse of a population without any bifurcation being crossed ("B-tipping"). A well-known example of a slow-fast predator-prey model in which R-tipping is observed [Vanselow, Wieczorek, Feudel, Journal of Theoretical Biology, 479, 64-72 (2019)] suffers from unecological "resurgence", whereby populations driven to functional extinction recover towards stable coexistence. We propose an analytically tractable model, incorporating a strong Allee effect into the prey dynamics in a slow-fast Lotka-Volterra-type predator-prey system, which induces bistability and thus renders the extinction state a genuine attractor. Applying geometric singular perturbation theory (GSPT), we describe the dynamics of the extended model that is obtained by "ramping" of the inverse prey carrying capacity. We show the presence of a parabolic-shaped, folded critical manifold which admits a folded saddle singularity, the strong canard of which separates solutions that track the moving coexistence state from those that tip to extinction. The analytical simplicity of our model allows us to derive explicit expressions for the critical rate that separates "tracking" from "tipping" dynamics. Finally, we argue that our system represents a minimal model for rate-induced tipping to extinction, in that it incorporates three essential ingredients: bistability, a folded critical manifold, and a folded-saddle-type canard.

  • 3 authors
·
Oct 7

Scalar field theory for (chiral) active Brownian particles: bottom-up derivation revisited

The active Brownian particle (ABP) model is one of the most widely used particle-based models in studies of scalar active fluids. A collection of interacting ABPs is known to exhibit intriguing phenomena that are absent in equilibrium counterparts. A prominent example is spontaneous phase separation, known as motility-induced phase separation (MIPS), which occurs even in the absence of explicit attractive interactions. In parallel, the large-scale behavior of scalar active fluids is often modeled using continuum descriptions, namely, scalar field theories. Such scalar active field theories are usually formulated in a top-down manner, and establishing their connections to particle-based models remains challenging, with these connections not yet fully understood. To advance the microscopic derivation of scalar active field theories, we revisit the connection between ABPs interacting via a two-body potential in two dimensions and scalar field theories that include all possible terms up to fourth order in spatial gradients. Our approach is based on a pressure expansion and the renormalization group (RG) method in the context of singular perturbation theory. The RG method provides a systematic way to eliminate fast variables and identify the dynamics on the slow invariant manifold. Within this framework, scalar field theories can be obtained as RG flow equations. We also apply this method to a chiral variant of the ABP model, the chiral ABP (cABP) model, in which a constant torque biases particle rotation to the left or right. We show that the scalar field theory corresponding to the cABP model contains two ``odd'' terms in addition to those present in the scalar field theory for ABPs. The method developed here may also be useful for deriving hydrodynamic descriptions of other types of active matter systems.

  • 2 authors
·
Sep 30

On the Dynamics of Acceleration in First order Gradient Methods

Ever since the original algorithm by Nesterov (1983), the true nature of the acceleration phenomenon has remained elusive, with various interpretations of why the method is actually faster. The diagnosis of the algorithm through the lens of Ordinary Differential Equations (ODEs) and the corresponding dynamical system formulation to explain the underlying dynamics has a rich history. In the literature, the ODEs that explain algorithms are typically derived by considering the limiting case of the algorithm maps themselves, that is, an ODE formulation follows the development of an algorithm. This obfuscates the underlying higher order principles and thus provides little evidence of the working of the algorithm. Such has been the case with Nesterov algorithm and the various analogies used to describe the acceleration phenomena, viz, momentum associated with the rolling of a Heavy-Ball down a slope, Hessian damping etc. The main focus of our work is to ideate the genesis of the Nesterov algorithm from the viewpoint of dynamical systems leading to demystifying the mathematical rigour behind the algorithm. Instead of reverse engineering ODEs from discrete algorithms, this work explores tools from the recently developed control paradigm titled Passivity and Immersion approach and the Geometric Singular Perturbation theory which are applied to arrive at the formulation of a dynamical system that explains and models the acceleration phenomena. This perspective helps to gain insights into the various terms present and the sequence of steps used in Nesterovs accelerated algorithm for the smooth strongly convex and the convex case. The framework can also be extended to derive the acceleration achieved using the triple momentum method and provides justifications for the non-convergence to the optimal solution in the Heavy-Ball method.

  • 5 authors
·
Sep 22, 2025

Surface Charge--Potential Relation for Spherical Particles in Electrolyte Solutions

Predicting the relationship between surface charge density and electrostatic potential for spherical particles remains a fundamental challenge in colloid science. Because the governing non-linear Poisson--Boltzmann equation lacks a general exact analytical solution, researchers typically rely on numerical calculations or various semi-empirical approximations. In this paper, we overcome these limitations by developing a dual-asymptotic framework that provides explicit, closed-form expressions for this surface charge--potential relationship across the entire spectrum of particle curvature. For weakly curved systems, where the Debye length λ_D is much smaller than the particle radius R (λ_D/R ll 1), a formal mathematical derivation rigorously establishes the Ohshima--Healy--White formula as an exact regular perturbation expansion. Conversely, for highly curved spheres (R/λ_D ll 1), we employ singular perturbation analysis using the scaled particle radius as the small parameter. This approach provides a first-principles mathematical justification for the spherical Debye--Hückel theory, proving that its leading-order expansion remains asymptotically exact within the full non-linear Poisson--Boltzmann framework due to the geometric deactivation of non-linearity. Crucially, we map the exact limits of this geometric regulation, demonstrating how non-linear screening re-emerges as the particle radius increases, with the breakdown threshold governed by the interplay between curvature and surface charge density.

  • 2 authors
·
Oct 1

Singular Contour Dynamics and Paradifferential Reduction

We develop a direct paradifferential approach to nonlinear graph integral operators arising in contour dynamics. The main methodological result is an abstract structure-preserving paralinearization theorem, valid in arbitrary dimension, for a class of homogeneous kernels whose nonlinear dependence on the graph is expressed through normalized finite differences. The theorem covers both critical principal-value kernels and subcritical locally integrable kernels, gives explicit formulas for the principal symbols, and separates the finite-order symbolic contribution generated by the homogeneous singularity from order-zero far-field terms and arbitrarily smoothing remainders. A structural feature of the reduction is the cancellation of the intermediate symbolic order; at the critical endpoint the construction also preserves the exact skew-adjoint structure of the original singular integral. As a main application, we consider the three-dimensional two-phase free-boundary Euler equations with constant interfacial background vorticity. We first derive an autonomous contour-dynamics equation in canonical surface variables and then apply the abstract theorem directly to the singular integral operators generated by the Birkhoff--Rott formulation. This yields the complete paradifferential structure of the system without taking the Dirichlet--Neumann reduction as a starting point. After introducing an Alinhac good unknown and diagonalizing the resulting system, we obtain local well-posedness for small Sobolev perturbations in the stable Kelvin--Rayleigh--Taylor regime, uniformly on compact subsets of the stable parameter set.

  • 3 authors
·
Oct 1

A likelihood approach to nonparametric estimation of a singular distribution using deep generative models

We investigate statistical properties of a likelihood approach to nonparametric estimation of a singular distribution using deep generative models. More specifically, a deep generative model is used to model high-dimensional data that are assumed to concentrate around some low-dimensional structure. Estimating the distribution supported on this low-dimensional structure, such as a low-dimensional manifold, is challenging due to its singularity with respect to the Lebesgue measure in the ambient space. In the considered model, a usual likelihood approach can fail to estimate the target distribution consistently due to the singularity. We prove that a novel and effective solution exists by perturbing the data with an instance noise, which leads to consistent estimation of the underlying distribution with desirable convergence rates. We also characterize the class of distributions that can be efficiently estimated via deep generative models. This class is sufficiently general to contain various structured distributions such as product distributions, classically smooth distributions and distributions supported on a low-dimensional manifold. Our analysis provides some insights on how deep generative models can avoid the curse of dimensionality for nonparametric distribution estimation. We conduct a thorough simulation study and real data analysis to empirically demonstrate that the proposed data perturbation technique improves the estimation performance significantly.

  • 4 authors
·
May 9, 2021

Numerical Construction of Quasi-Periodic Solutions for Nonlinear PDEs: I. Bounded Perturbation

In this paper, we propose an alternating numerical scheme for constructing quasi-periodic solutions to a class of nonlinear partial differential equations (PDEs) with bounded perturbations, including the one-dimensional nonlinear Schrödinger (NLS) equations and nonlinear wave (NLW) equations under periodic and Dirichlet boundary conditions. A key observation concerning the resonant Q-equations allows us to establish directly a local diffeomorphism between the amplitudes and the drifted frequencies. This renders the proof considerably cleaner, since it avoids the Birkhoff normal form and the associated coordinate transformations required in classical KAM theory for PDEs.Unlike in the finite-dimensional setting, the lattice boxes must also include the spatial index, so that the multiscale induction has to be carried out in one additional dimension. This introduces two difficulties. First, the measure estimate for the excluded set of ``bad'' frequencies must account for the spatial index. For both the NLS and NLW equations, the linear frequencies and their differences are integers or close to integers; this allows the spatial dependence to be controlled through the modulus of the temporal index, so that the excluded measure remains under control. Second, a singular set may contain sites with the same temporal index but widely separated spatial indices, which obstructs the ``inversion implies localization'' process. For the one-dimensional NLS and NLW equations, however, such sites occur only in pairs with opposite spatial indices. They can therefore be separated by small boxes, after which the global inverse is obtained from the local inverses via the resolvent identity. Numerical experiments illustrate the scheme for nonlinear traveling and standing waves, exhibiting both the computed quasi-periodic solutions and the convergence of the iteration.

  • 2 authors
·
Oct 4

Emergent magnetic nonanalyticity in Dirac altermagnets

Symmetry has long provided the organizing principle for understanding how materials respond to external perturbations. Here we show that what is permitted by symmetry need not be what actually emerges from the underlying system, and this distinction becomes particularly consequential for symmetry-related gapless Dirac fermions such as in altermagnets. A perturbation that shifts the Dirac points drives a Lifshitz reconstruction and generates an intrinsically nonanalytic effective potential, giving rise to undiscovered singular responses. In Dirac altermagnets, this nonanalyticity acquires a magnetic manifestation through C-paired spin-polarized Dirac cones: breaking the pairing symmetry C lifts their degeneracy and converts the associated Lifshitz reconstruction into an itinerant magnetization. As a consequence, piezomagnetism, the induction of a net magnetization by a mechanical strain, becomes nonlinear and nonanalytic, with Mproptosgn(varepsilon)varepsilon^2, whereas the linear response is absent despite being allowed by symmetry. Accordingly, the leading response cannot be inferred from the conventional symmetry-based paradigm of material response built upon the cornerstones of Neumann's principle and analytic Landau expansion. First-principles calculations identify the monolayer Fe_2S as a candidate material realization for such singular magnetic responses. These results suggest quantum singularities as a new degree of freedom for engineering material responses.

  • 6 authors
·
Oct 2

Interpreting effective homogeneous rheologies through a local differential map with application to the Moon

Layered viscoelastic interiors control the frequency dependence of planetary tidal dissipation, but repeated layered Love-number calculations are expensive in long-term orbital and spin integrations. Equivalent homogeneous rheologies provide a cheaper representation of the same response, but their effective parameters do not by themselves identify the interior layers they represent. We develop a local interpretation of such parameters by differentiating the layered-to-homogeneous construction about a fixed-geometry baseline, perturbing only selected layer rigidities and viscosities. We use the pole-residue representation of the degree-two Love number to construct a physical-to-effective transfer matrix. We then use its singular values, resolution matrix, and mode-dominance matrix to determine which physical perturbations are visible in the Love-number response and how they appear in effective-rheology coordinates. Applied to a five-layer lunar model, the full degree-two response is sensitive to seven of eight solid-layer rheological parameters. The single near-null direction is the inner-core rigidity, consistent with shielding by the fluid outer core and with the weak dependence of Love numbers on core elastic structure. Over the LLR frequency interval, fewer physical directions are visible. To first order, the elastic spring, isolated dashpot, and two Voigt elements reproduce the nine-pole response over this interval. Finite perturbations confirm the tangent prediction to within a few percent, with the validity radius limited by a nearly degenerate pair of long-timescale modes.

  • 1 authors
·
Sep 30

Low-Precision Rank Compensation for Matrices and Tensor Trains

Lower numerical precision reduces storage and memory traffic but raises the perturbation floor. We study rank compensation: reinvesting saved memory in a larger approximation rank. For matrices, the singular-value error identity yields a directly testable sufficient condition requiring the additional singular component to offset the perturbation from storing the rank-augmented approximation in lower precision. On ten SuiteSparse matrices, all 100 truncation-dominated configurations (50 FP32 and 50 FP16) are certified non-increases and strict accuracy wins, with mean error ratio 0.963 and storage ratios 58.8% and 29.4% relative to the FP64 baseline. FP16 failures occur only in tail-rank stress tests near the perturbation floor. At the largest resident matrix-application batch, compensated FP32 and FP16 achieve geometric-mean A100 speedups of 1.28times and 2.12times; neither accelerates the smallest batch. For Tensor-Train (TT) approximation, we give a conditional a posteriori extension based on the measured truncation gain and rounded-core perturbation. Across three-way and six-way synthetic tests, FP32 and FP16 achieve combined accuracy-memory wins in 10 of 20 and 14 of 20 trials. On public hyperspectral tensors and FROSTT top-active subtensors, the corresponding counts are 44 of 60 and 54 of 60; four FP16 Salinas-A tail-stress cases fail. No certified TT case exceeds the FP64 error beyond numerical tolerance. Reconstruction of six public tensors yields geometric-mean compensated speedups of 1.38times (FP32) and 1.94times (FP16). Timings cover resident downstream kernels, not factorization, transfers, or end-to-end acceleration.

  • 2 authors
·
Jul 13

$\text{G}^2$RPO: Granular GRPO for Precise Reward in Flow Models

The integration of online reinforcement learning (RL) into diffusion and flow models has recently emerged as a promising approach for aligning generative models with human preferences. Stochastic sampling via Stochastic Differential Equations (SDE) is employed during the denoising process to generate diverse denoising directions for RL exploration. While existing methods effectively explore potential high-value samples, they suffer from sub-optimal preference alignment due to sparse and narrow reward signals. To address these challenges, we propose a novel Granular-GRPO (G^2RPO ) framework that achieves precise and comprehensive reward assessments of sampling directions in reinforcement learning of flow models. Specifically, a Singular Stochastic Sampling strategy is introduced to support step-wise stochastic exploration while enforcing a high correlation between the reward and the injected noise, thereby facilitating a faithful reward for each SDE perturbation. Concurrently, to eliminate the bias inherent in fixed-granularity denoising, we introduce a Multi-Granularity Advantage Integration module that aggregates advantages computed at multiple diffusion scales, producing a more comprehensive and robust evaluation of the sampling directions. Experiments conducted on various reward models, including both in-domain and out-of-domain evaluations, demonstrate that our G^2RPO significantly outperforms existing flow-based GRPO baselines,highlighting its effectiveness and robustness.

Data-Efficient Augmentation for Training Neural Networks

Data augmentation is essential to achieve state-of-the-art performance in many deep learning applications. However, the most effective augmentation techniques become computationally prohibitive for even medium-sized datasets. To address this, we propose a rigorous technique to select subsets of data points that when augmented, closely capture the training dynamics of full data augmentation. We first show that data augmentation, modeled as additive perturbations, improves learning and generalization by relatively enlarging and perturbing the smaller singular values of the network Jacobian, while preserving its prominent directions. This prevents overfitting and enhances learning the harder to learn information. Then, we propose a framework to iteratively extract small subsets of training data that when augmented, closely capture the alignment of the fully augmented Jacobian with labels/residuals. We prove that stochastic gradient descent applied to the augmented subsets found by our approach has similar training dynamics to that of fully augmented data. Our experiments demonstrate that our method achieves 6.3x speedup on CIFAR10 and 2.2x speedup on SVHN, and outperforms the baselines by up to 10% across various subset sizes. Similarly, on TinyImageNet and ImageNet, our method beats the baselines by up to 8%, while achieving up to 3.3x speedup across various subset sizes. Finally, training on and augmenting 50% subsets using our method on a version of CIFAR10 corrupted with label noise even outperforms using the full dataset. Our code is available at: https://github.com/tianyu139/data-efficient-augmentation

  • 2 authors
·
Oct 15, 2022

Stark effect of hydrogenic ions as a test of the indefinite-metric formalism of the eight-component relativistic wave equation for spin-$\frac{1}{2}$ particles

The eight-component relativistic wave equation for spin-1{2} particles of Robson and Staudte (FV1{2}), a Feshbach--Villars linearization of the Feynman--Gell-Mann equation, reproduces the Dirac hydrogenic spectrum with a doubled solution space and an indefinite inner product. Its exact Stark shifts must equal the Dirac ones; whether its indefinite-metric perturbation theory delivers them is not guaranteed. We compute the first- and second-order Stark shifts of the n=1--3 levels of hydrogenic ions from H to U^{91+} in the Schrödinger, Dirac and FV1{2} theories, evaluating all spectral sums, continuum included, by the Dalgarno--Lewis method. The FV1{2} and Dirac shifts coincide level by level, to working precision at first order (closed-form roots) and to 45 significant figures at second order. Both ingredients are needed: without the explicit spin--field coupling the first-order roots become complex, and without the negative-norm states the (Zα)^2 coefficient is wrong. Norm sign and parity are locked in the doubled space: a potential lifting the 2s_{1/2}--2p_{1/2} degeneracy needs its own spin--gradient term, and shifts placed by hand on the κ-labeled states give a spurious imaginary linear Stark shift. The relativistic linear Stark effect is smaller by finite factors, but a second-moment sum rule shows the non-relativistic linear Stark strength is conserved, the missing part reappearing in singular (Zα)^{-2} second-order terms. For levels with a fine-structure partner, an exact intra-shell/regular split of the second-order shift gives the (Zα)^0 coefficients analytically and relates the π^2 terms of the (Zα)^2 coefficients to the singular ones. The Dirac weak/strong-field crossover for n=2 of hydrogen lies near 2.8~kV cm^{-1}, and the perturbative window set by the fine structure grows as Z^5.

  • 3 authors
·
Sep 30

Nonreciprocal black holes with primary hair in beyond Horndeski gravity: Exact solutions and stability

We develop a novel systematic method for constructing exact, static, and asymptotically flat black-hole solutions in shift-symmetric and Z_2-symmetric beyond Horndeski theories. In contrast to previous studies, our approach does not rely on the restrictive reciprocal condition g_{tt}g_{rr}=-1, allowing for more general geometries characterized by two independent metric functions. The resulting solution space contains two qualitatively distinct types of hair originating from different branches of the theory. One branch is characterized by khronometric hair, while the other by genuine scalar hair. In both, the scalar profile defines a nontrivial preferred foliation, but the shift-symmetry Noether current and the associated propagating degree of freedom are trivial for the former and nonvanishing for the latter. Focusing mainly on the second branch, we derive several distinct families of exact black-hole solutions. In general, these solutions are singular and exhibit primary scalar hair associated with an independent scalar charge. Nevertheless, we demonstrate that they can be regularized to yield regular black-hole or solitonic configurations, for which the scalar hair becomes secondary. We further investigate the stability properties of these solutions under linear perturbations by analyzing the axial sector and the monopole (ell=0) mode of the even-parity sector. For representative solutions with scalar hair, the perturbative analysis provides evidence for linear stability under the modes considered.

  • 3 authors
·
Oct 7

SNIC bifurcation and its Application to MEMS

This project focuses on a method to extract a frequency comb in mechanical means, for general interest and numerous practical applications in MEMS. The method of execution is the implementation of a beam that is exhibiting non-linear dynamics that is perturbed and analyzed for its transverse vibrations. The perturbation is an external harmonic driver with a chosen small amplitude and frequency (which is slightly detuned from the beam eigenfrequency), that when engaged with the unperturbed beam oscillations, causes it reach a state of "injection pulling" - an effect that occurs when one harmonic oscillator is coupled with a second one and causes it to oscillate in a frequency near its own. This causes the beam to reach SNIC bifurcation, rendering a frequency comb as desired. Theoretical analysis showed that the problem can be modelled using a non-linear equation of the beam, that translates to a form of the non-linear Duffing equation. While a solution to the dynamics function of the beam is hard to obtain in practice due to mathematical difficulties, a slow evolution model is suggested that is composed of functions of a amplitude and phase. Using several additional mathematical assumptions, the amplitude is seen to be related to the phase, while the phase equation solution is seen to be of the form of Adler's equation. These assumptions ultimately reduce the entire behaviour of the beam to a relatively simple solution to the Adler equation, which has a known analytical solution. Computerized numerical simulations are run on it to check the results and compare them to the theory and desired outcome. The results agreed with the theory and produce the expected frequency comb, showing the assumptions to be valid in extracting the comb.

  • 1 authors
·
Aug 24, 2025

Hierarchical Melnikov Realization: Logarithmic Factor Improvement to Hilbert Number Lower Bounds

The second part of Hilbert's 16th problem is one of the most fundamental open problems in the qualitative theory of ordinary differential equations and dynamical systems. A central unresolved question is whether the Hilbert number H(d) is finite for arbitrary polynomial degree d. (A very recent manuscript from OpenAI asserts the finiteness of H(d); see the remark at the end of this paper.) In the absence of a general upper bound theory, most existing work constructs explicit perturbed polynomial systems to obtain improved lower bounds for H(d), while rigorous upper bound estimates remain largely unavailable. This paper focuses on improving the quantitative lower bound for polynomial systems through a systematic Hierarchical Melnikov Realization framework. We construct perturbed dynamics based on an anisotropic Chebyshev Hamiltonian, where hierarchically selected perturbation coefficients generate simple zeros of the first-order Melnikov function simultaneously across multiple disjoint period annuli. Two distinct 3-adic filtrations supply the necessary logarithmic correction factors, and a Borel--Gauss analysis establishes the required local rank condition under sufficiently strong anisotropy. As the main result of this work, we prove that H(d)=Ωbigl(d^2ln^2 dbigr), which improves the previously known lower bound by a factor of ln d. The full construction of limit cycles and the resulting dynamical bounds are formally certified using Lean 4 formal verification.

  • 2 authors
·
Oct 7

Perturbation Analysis of Neural Collapse

Training deep neural networks for classification often includes minimizing the training loss beyond the zero training error point. In this phase of training, a "neural collapse" behavior has been observed: the variability of features (outputs of the penultimate layer) of within-class samples decreases and the mean features of different classes approach a certain tight frame structure. Recent works analyze this behavior via idealized unconstrained features models where all the minimizers exhibit exact collapse. However, with practical networks and datasets, the features typically do not reach exact collapse, e.g., because deep layers cannot arbitrarily modify intermediate features that are far from being collapsed. In this paper, we propose a richer model that can capture this phenomenon by forcing the features to stay in the vicinity of a predefined features matrix (e.g., intermediate features). We explore the model in the small vicinity case via perturbation analysis and establish results that cannot be obtained by the previously studied models. For example, we prove reduction in the within-class variability of the optimized features compared to the predefined input features (via analyzing gradient flow on the "central-path" with minimal assumptions), analyze the minimizers in the near-collapse regime, and provide insights on the effect of regularization hyperparameters on the closeness to collapse. We support our theory with experiments in practical deep learning settings.

  • 3 authors
·
Oct 29, 2022

PerturbDiff: Functional Diffusion for Single-Cell Perturbation Modeling

Building Virtual Cells that can accurately simulate cellular responses to perturbations is a long-standing goal in systems biology. A fundamental challenge is that high-throughput single-cell sequencing is destructive: the same cell cannot be observed both before and after a perturbation. Thus, perturbation prediction requires mapping unpaired control and perturbed populations. Existing models address this by learning maps between distributions, but typically assume a single fixed response distribution when conditioned on observed cellular context (e.g., cell type) and the perturbation type. In reality, responses vary systematically due to unobservable latent factors such as microenvironmental fluctuations and complex batch effects, forming a manifold of possible distributions for the same observed conditions. To account for this variability, we introduce PerturbDiff, which shifts modeling from individual cells to entire distributions. By embedding distributions as points in a Hilbert space, we define a diffusion-based generative process operating directly over probability distributions. This allows PerturbDiff to capture population-level response shifts across hidden factors. Benchmarks on established datasets show that PerturbDiff achieves state-of-the-art performance in single-cell response prediction and generalizes substantially better to unseen perturbations. See our project page (https://katarinayuan.github.io/PerturbDiff-ProjectPage/), where code and data will be made publicly available (https://github.com/DeepGraphLearning/PerturbDiff).

  • 6 authors
·
Feb 22

Deep Learning solutions to singular ordinary differential equations: from special functions to spherical accretion

Singular regular points often arise in differential equations describing physical phenomena such as fluid dynamics, electromagnetism, and gravitation. Traditional numerical techniques often fail or become unstable near these points, requiring the use of semi-analytical tools, such as series expansions and perturbative methods, in combination with numerical algorithms; or to invoke more sophisticated methods. In this work, we take an alternative route and leverage the power of machine learning to exploit Physics Informed Neural Networks (PINNs) as a modern approach to solving ordinary differential equations with singular points. PINNs utilize deep learning architectures to approximate solutions by embedding the differential equations into the loss function of the neural network. We discuss the advantages of PINNs in handling singularities, particularly their ability to bypass traditional grid-based methods and provide smooth approximations across irregular regions. Techniques for enhancing the accuracy of PINNs near singular points, such as adaptive loss weighting, are used in order to achieve high efficiency in the training of the network. We exemplify our results by studying four differential equations of interest in mathematics and gravitation -- the Legendre equation, the hypergeometric equation, the solution for black hole space-times in theories of Lorentz violating gravity, and the spherical accretion of a perfect fluid in a Schwarzschild geometry.

  • 3 authors
·
Sep 30, 2024

Excitation of non-modal perturbations in hypersonic boundary layers by free stream forcing. Part III: effects of wall temperature and nose bluntness

This paper constitutes Part III of a series investigating the excitation of non-modal perturbations in hypersonic blunt-nose boundary layers. Based on the numerical shock-fitting harmonic linearised Navier-Stokes (SF-HLNS) approach presented in Part I (Zhao & Dong, J. Fluid Mech. 2025, vol. 1013: A44) and the asymptotic analysis developed in Part II (Dong et al., J. Fluid Mech., under review), the present work focuses specifically on the influence of nose bluntness (Reynolds number R) and wall temperature T_w on receptivity efficiency through seven detailed case studies. Analysed via the three-step asymptotic model, the downstream perturbation amplitude is governed by two distinct factors: the stagnation vorticity perturbation, determined through shock-perturbation interaction and the slow-down convection mechanism, and the parabolic evolution of non-modal perturbations driven by the lift-up mechanism. Increasing R strongly amplifies the stagnation vorticity response, with only mild enhancement of the lift-up effect. In contrast, decreasing T_w strengthens the stagnation vorticity perturbation, but slightly weakens the lift-up effect; the net result is an overall intensification of the downstream perturbation amplitude with decreasing T_w. Furthermore, explicit scaling laws for receptivity efficiency with respect to R and T_w are established. This study completes the theoretical foundation for non-modal receptivity in hypersonic blunt boundary layers, and serves as a key step toward a physics-based transition prediction framework.

  • 4 authors
·
Oct 2

Parabolic-elliptic and indirect-direct simplifications in chemotaxis systems driven by indirect signalling

Singular limits for the following indirect signalling chemotaxis system align* \left\{ array{lllllll} \partial_t n = \Delta n - \nabla \cdot (n \nabla c ) & in \Omega\times(0,\infty) , \varepsilon \partial_t c = \Delta c - c + w & in \Omega\times(0,\infty), \varepsilon \partial_t w = \tau \Delta w - w + n & in \Omega\times (0,\infty), \partial_\nu n = \partial_\nu c = \partial_\nu w = 0, &on \partial\Omega\times (0,\infty) %(n,c,w)_{t=0} = (n_0,c_0,w_0) & on \Omega, array \right. align* are investigated. More precisely, we study parabolic-elliptic simplification, or PES, varepsilonto 0^+ with fixed tau>0 up to the critical dimension N=4, and indirect-direct simplification, or IDS, (varepsilon,tau)to (0^+,0^+) up to the critical dimension N=2. These are relevant in biological situations where the signalling process is on a much faster time scale compared to the species diffusion and all interactions. Showing singular limits in critical dimensions is challenging. To deal with the PES, we carefully combine the entropy function, an Adam-type inequality, the regularisation of slow evolution, and an energy equation method to obtain strong convergence in representative spaces. For the IDS, a bootstrap argument concerning the L^p-energy function is devised, which allows us to obtain suitable uniform bounds for the singular limits. Moreover, in both scenarios, we also present the convergence rates, where the effect of the initial layer and the convergence to the critical manifold are also revealed.

  • 4 authors
·
Aug 2, 2025

Endpoint-Stable Interval Inverse Inequalities for Multiscale Kernels with Positive Exponential Spectra

Inverse inequalities are essential for controlling derivative growth and ensuring stable sampling in kernel approximation. Existing whole-space and single-scale estimates provide an established analytical basis, but their extension to multiscale analytic spaces on finite intervals requires uniform control of boundary effects and cross-scale cancellation. This paper establishes unweighted interval \(L^2\) inverse inequalities for spaces generated by primitives of kernels with positive exponential spectra. By retaining exterior diagonal energy and controlling off-diagonal interactions through one-sided estimates with endpoint-distance weights, we derive uniform coefficient bounds for normalized high derivatives. A synthesis-operator perturbation argument extends these bounds to positive spectral mixtures, while adjacent-derivative comparison and interval interpolation yield an inverse bound of order \(h_*^{-1}\), where \(h_*\) is the smallest scale. Under geometric scale separation and within-scale centre separation, the constant is independent of the number of scales and centres and their distances from the endpoints, allowing endpoint centres and coincident centres across scales. The coefficient lower bound approaches the optimal limit \(1/2\). Two-centre constructions establish the sharpness of the scale exponent for every fixed kernel in the class and, for a single exponential spectrum, a sharp deficit of order \(q^{-1/2}\) from \(1/2\) for the best uniform coefficient lower bound, where \(q\) is the derivative order. Numerical illustrations for Cauchy and logistic kernels demonstrate coefficient stability in several multiscale configurations. These results extend interval inverse estimates to multiscale analytic kernel spaces with endpoint centres and provide quantitative conditions for deterministic sampling stability.

  • 2 authors
·
Oct 5

The pseudospectrum for gravitational perturbations in Kerr spacetimes

We study the pseudospectrum of the Kerr black hole for gravitational perturbations with spin weight s=2, the case of greatest interest in gravitational-wave astronomy. In the hyperboloidal framework with two-dimensional Chebyshev collocation, we formulate the quasinormal mode problem as a non-self-adjoint eigenvalue problem. For sneq0 the fields Ψ^{(s)} and Ψ^{(-s)} are independent, so the conserved current method yields no single-field energy norm. We overcome this with the Teukolsky--Starobinsky identities, which relate Ψ^{(-2)} to a fourth-order operator on Ψ^{(2)} and yield an H^2 energy norm after symmetrization. With the H^1 norm known for s=0, this suggests the pattern H^{|s|}, verified for s=0 and s=2. All results use an ω-independent two-field hierarchy. We find that the pseudospectrum tightens by 1.1 to 3.5 decades at each step of L^2to H^1to H^2, yet stays large in every norm. The s=+2 and s=-2 operators are isospectral but not isopseudospectral: at twelve of fourteen probes the ψ_0 resolvent exceeds the ψ_4 one by 0.19 to 0.82 decades in the H^2 norm, while at the two probes furthest along the QNM line the ordering reverses by 0.18 to 0.19 decades. The gravitational pseudospectrum exceeds the scalar one by 0.5 to 5.2 decades in the window minimum and by 5.9 decades in L^2 at ωM=0.47-0.17,i, while along the damping direction the s=2 resolvent is non-monotonic and the s=0 resolvent smooth. QNM spectral instability is therefore a universal feature of Kerr, and is stronger for gravitational perturbations.

  • 3 authors
·
Oct 2

Learning Perturbation-Specific Representations through Conditional Energy Prior for Cellular Response Prediction

AI-based cellular perturbation prediction is essential to accelerate drug discovery and therapeutic identification. However, perturbation-specific signals are generally obscured by cellular complexity, making it difficult for existing methods to correctly capture perturbation effects. To address this problem, we propose PerturbEnergy, which introduces a conditional energy-based prior over perturbation representations. It assigns lower energy (higher probability) to representations compatible with the given perturbation and higher energy to others, thereby explicitly tilting the latent space toward perturbation-preferred regions. Besides, PerturbEnergy can be integrated into autoencoder architectures as we find its Evidence Lower Bound (ELBO) is equivalent to the ELBO of the complete autoencoder. We further prove that optimizing PerturbEnergy increases the lower bound on the conditional mutual information between representation and perturbation. Extensive experiments on four benchmark datasets demonstrate the effectiveness of our PerturbEnergy: it improves perturbation recognition especially in latent space with improvement of up to 83.2\%; It also achieves state-of-the-art performance for predicting top-50/100/200 differentially expressed gene(DEG) response and remaining competitive on highly variable gene(HVG) prediction. The code is provided: https://github.com/BlueWhaleLab/PerturbEnergy

  • 2 authors
·
Oct 12

scDFM: Distributional Flow Matching Model for Robust Single-Cell Perturbation Prediction

A central goal in systems biology and drug discovery is to predict the transcriptional response of cells to perturbations. This task is challenging due to the noisy and sparse nature of single-cell measurements, as well as the fact that perturbations often induce population-level shifts rather than changes in individual cells. Existing deep learning methods typically assume cell-level correspondences, limiting their ability to capture such global effects. We present scDFM, a generative framework based on conditional flow matching that models the full distribution of perturbed cells conditioned on control states. By incorporating a maximum mean discrepancy (MMD) objective, our method aligns perturbed and control populations beyond cell-level correspondences. To further improve robustness to sparsity and noise, we introduce the Perturbation-Aware Differential Transformer (PAD-Transformer), a backbone architecture that leverages gene interaction graphs and differential attention to capture context-specific expression changes. Across multiple genetic and drug perturbation benchmarks, scDFM consistently outperforms prior methods, demonstrating strong generalization in both unseen and combinatorial settings. In the combinatorial setting, it reduces mean squared error by 19.6% relative to the strongest baseline. These results highlight the importance of distribution-level generative modeling for robust in silico perturbation prediction. The code is available at https://github.com/AI4Science-WestlakeU/scDFM

  • 4 authors
·
Feb 5

Weather Jiu-Jitsu: Exploring the Feasibility of Control Paradigms in Weather Foundation Models

Weather Jiu-Jitsu is a control paradigm for extreme climatological events, inspired by chaos theory. As a proposition, small, precise, targeted, and cost-inexpensive perturbations can redirect trajectories of a large dynamical system. This strategy has been demonstrated analytically in the Lorenz-63 system, where a naturally chaotic trajectory switching between two attractors can be confined to a single attractor, indefinitely, via arbitrarily small perturbations. This paper examines the feasibility of Microsoft's Aurora -- a 1.3 billion parameter global atmospheric model -- as a test bed for this strategy. This paper explores three questions: (1) Is Aurora a reliable enough simulation environment to serve as a meaningful testbed? (2) Are the perturbations required to redirect its trajectories small enough to be physically plausible? (3) Does Aurora's learned latent space (the parametric estimators on climatological attributes) yield any apparent, structured, and/or perhaps interpretable features that can convey a geo/atmospheric response to initial conditions? We find evidence consistent with all three: Aurora's modeled trajectories respond to perturbations beyond measurement drift, the perturbation magnitudes required are small relative to the model's own forecast uncertainty, and its latent representations exhibit directional structure that responds to Jiu-Jitsu-type interventions, even though that structure does not separate extreme from normal states outright. These results should be read as feasibility diagnostics rather than a demonstration of control: we do not implement or test an actual steering intervention on Aurora, and several of our findings, particularly around the model's latent-space geometry, are exploratory.

  • 3 authors
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Sep 29

Finite-Precision Symmetric Krylov Methods: Exact Rounding Examples, Block Paige Identities,and a Variable-Block Lanczos Model

Short-recurrence Krylov methods that are equivalent in exact arithmetic often diverge in floating-point arithmetic. To illustrate this, we provide an exactly representable two-cycle for steepest descent with a recursively updated residual. A complementary convergence theorem gives a sufficient condition under which the stored residual decreases geometrically. We then show that a second positive definite family yields different outcomes for a Hestenes--Stiefel Conjugate Gradient (CG) implementation and a direct Lanczos--Galerkin approach. CG finds the exact solution after four updates, whereas the two-step projected system becomes inconsistent. Under stated perturbation and transfer hypotheses, a common spectral enclosure gives comparable convergence bounds. For a dense, left-to-right evaluation order, we prove a sufficient precision bound for a prescribed backward error within n updates for an ntimes n matrix, together with a computable stopping test and specified exponent-range assumptions. We use polynomial estimates and numerical experiments to examine the trade-off between working precision and the number of CG iterations needed to achieve a prescribed backward error. We also compare results on inexact matrix-vector products and preconditioning with the frameworks of Paige and Greenbaum. For block Lanczos, we analyze Householder orthogonalization and singular-value truncation as the block size changes. Under componentwise and normwise error bounds, the computed coefficients satisfy a controlled local recurrence and an exact block Lanczos relation for a nearby symmetric problem in a larger space. A block form of Paige's identity bounds the overlap with a Ritz vector along its residual coordinate direction. An inter-block recurrence describes the evolution of overlap, and a Gram-matrix argument gives a count of additional nearby Ritz values.

  • 1 authors
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Sep 7

Convex-Hull-Neighborhood Smooth Dual Generalization: Controlling Local Correction Propagation in Offline RL

Offline reinforcement learning (offline RL) can benefit from nearby out-of-distribution (OOD) actions, but estimation errors at these actions may be amplified by bootstrapping. Existing regularization and local-generalization methods control either the admissible OOD region or the influence of generalized targets, often through separate mechanisms. We propose Convex Hull Neighborhood Smooth Dual Generalization (CSDG), which expresses the Bellman backup as an in-sample value target plus a CHN-local correction. This formulation makes the generalized contribution explicit and separates it from the in-sample reference path. The correction is obtained by smoothing in-sample-oriented and OOD-oriented candidates sampled at different perturbation radii. A mixture coefficient lambda scales its contribution to each backup, while the recursive discount remains gamma. Under boundedness and fixed perturbation kernels, we derive an exact one-step correction identity, a time-varying iterate bound, and a fixed-point bound that depends only on the branch discrepancy at the fixed point. We further characterize the implicit policies induced by the idealized operators and give a conditional non-degradation criterion. The practical algorithm approximates these quantities using asymmetric bounded noise and expectile regression, without exact support classification or an additional pessimistic OOD penalty. Experiments on Gym-MuJoCo and AntMaze show strong aggregate performance and stable value estimation. Code is available at: https://github.com/YOUNG-fnxm/CSDG

  • 6 authors
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Aug 3

Resonance expansions and local-energy decay estimates for Dirac operators

We study resonance expansions and localised long-time dynamics for three-dimensional semiclassical Dirac operators. For smooth Hermitian matrix-valued perturbations which are analytic outside a compact set, we first obtain exponential cut-off resolvent bounds away from the resonance set and polynomial bounds in thin resonance-free rectangles adjacent to the real axis. Combining these estimates with a local Oc(h^{-3}) upper bound on the number of resonances, a pigeonhole selection of admissible contours, almost-analytic functional calculus, and a Cauchy--Green deformation, we derive resonance expansions for spectrally localised propagators. Positive-energy resonances contribute for large positive times, whereas negative-energy resonances contribute for large negative times. We then specialise to mass-type perturbations mbfβV(x) in a nontrapping energy window. Using the logarithmic resonance-free region established in our earlier work together with a quantitative FBI-transform/escape-function argument, we obtain a polynomial bound for the continued cut-off resolvent and deduce rapid local-energy decay. We subsequently refine this polynomial estimate by a finite-time propagation argument in the undistorted region. Introducing the maximal positive-sheet connection time T_χ associated with the spatial cutoff, we prove a geometric continued-resolvent estimate and, for every fixed M below the resonance-free depth constant, derive the explicit local-energy decay threshold T_N>T_χ+(N+1)/M. The same analysis gives a rigorous microlocal obstruction to a uniform [hlog(1/h)]^{-1} bound for the full distorted resolvent and identifies a finite-flight-time amplification mechanism for the sandwiched continued resolvent at logarithmic depth.

  • 2 authors
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Sep 30

A Comprehensive Perturbative Formalism for Phase Mixing in Perturbed Disks. II. Phase Spirals in an Inhomogeneous Disk Galaxy with a Non-responsive Dark Matter Halo

We develop a linear perturbative formalism to compute the response of an inhomogeneous stellar disk embedded in a non-responsive dark matter halo to perturbations like bars, spiral arms and satellite galaxy encounters. Without self-gravity to reinforce it, the response of a Fourier mode phase mixes away due to an intrinsic spread in the vertical (Omega_z), radial (Omega_r) and azimuthal (Omega_phi) frequencies, giving rise to local phase-space spirals. Collisional diffusion due to scattering of stars by structures like giant molecular clouds causes super-exponential damping of the phase-spiral amplitude. The z-v_z phase-spiral is 1-armed (2-armed) for vertically anti-symmetric (symmetric) bending (breathing) modes. Only transient perturbations with timescales (tau_{P}) comparable to the vertical oscillation period (tau_z sim 1/Omega_z) trigger z-v_z phase-spirals. Each (n,l,m) mode of the response to impulsive (tau_{P}<tau=1/(nOmega_z+lOmega_r+mOmega_phi)) perturbations is power law (sim tau_{P}/tau) suppressed, but that to adiabatic (tau_{P}>tau) perturbations is exponentially weak (sim left[-left(tau_{mathrm{P}/tauright)^alpharight]}) except resonant (tauto infty) modes. Slower (tau_{P}>tau_z) perturbations, e.g., distant encounters with satellite galaxies, induce stronger bending modes. If the Gaia phase-spiral was triggered by a satellite, Sagittarius is the leading contender as it dominates the Solar neighborhood response of the Milky Way disk to satellite encounters. However, survival against collisional damping necessitates that the impact occurred within sim 0.6-0.7 Gyr ago. We discuss how the detailed galactic potential dictates the phase-spiral shape: phase mixing occurs slower and phase-spirals are less wound in the outer disk and in presence of an ambient halo.

  • 3 authors
·
Feb 28, 2023

Geometric effects on the persistence of patch structures for 2D Euler equations in simply-connected bounded domains

We first prove a rigidity result for uniformly rotating vortex patch solutions to Euler equations in bounded simply-connected planar domains. Namely, if a bounded simply-connected domain with real-analytic boundary contains a nontrivial vortex patch that remains strictly inside the domain while undergoing a uniform rigid rotation, then the ambient domain must be a disc centered at the rotation center. The proof combines the rotating-frame formulation with harmonic unique continuation and the generalized Schwarz's reflection principle across analytic boundary arcs. These tools imply that, unless the outer domain is rotationally invariant, the velocity must vanish in an open region surrounding the patch, contradicting the nonzero circulation generated by the patch. In the same spirit, we show that only circular domains possess a circular point vortex orbit. As a second result, we construct quasi-periodic vortex patch solutions to the Euler equations in domains that are small perturbations of the unit disc D. The amplitudes of the solutions are linked to the size of the domain deformation, allowing the classical Rankine vortices bcdotD, bin(0,1), to be regarded as equilibrium states. Our analysis is perturbative with respect to the construction developed in the undeformed case, and the resulting quasi-periodic solutions exist for most values of the inner radius b. This provides the first construction of quasi-periodic vortex patch solutions to the Euler equations in non-radial domains. Moreover, combined with the rigidity result established above, this shows that, in the periodic case, these solutions cannot arise from a purely rigid rotation.

  • 1 authors
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Oct 5

Steady-State Phase Transition States and Large-Time Asymptotics for the Cauchy Problem of Compressible Navier-Stokes Equations with van der Waals Equation of State

We study the Cauchy problem for the one-dimensional isothermal compressible Navier--Stokes system with the van der Waals equation of state, and analyze the well-posedness and asymptotic stability of steady-state phase-transition solutions at subcritical temperatures. Working in Lagrangian coordinates, we use variational techniques to construct piecewise smooth steady-state solutions corresponding to two-phase equilibrium states under finite-mass perturbations. Introducing artificial-viscosity regularization, we first establish existence of the global minimizer of the regularized variational problem, unique within each fixed symmetry class; passing to the vanishing artificial-viscosity limit then yields a physically admissible steady-state solution with two phase interfaces. For initial perturbations that are small with respect to energy, piecewise-gradient, total-variation, and integral norms but may exhibit large pointwise jumps across phase boundaries, we derive uniform a priori bounds for weak solutions near the two-phase equilibrium profile. We further prove that these global weak solutions converge to the steady-state two-phase equilibrium in L^infty(R) as ttoinfty, thereby characterizing their large-time asymptotic behavior. Physically, finite mass perturbations break the uniqueness of the uniform steady state and generate infinitely many piecewise constant two-phase equilibria satisfying the Maxwell equal-area rule. Artificial viscosity acts as a selection principle that singles out the physically relevant two-interface steady-state configuration, and this two-phase equilibrium is asymptotically stable under small integral perturbations that allow large-amplitude discontinuities at phase interfaces.

  • 4 authors
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Oct 4

Equal Path Cost, Unequal Output Effects: Understanding Perturbation Propagation in Diffusion Models

Diffusion models have achieved remarkable success in generative modeling, with their sampling procedures routinely modified to control generation and improve efficiency. These modifications introduce perturbations along the sampling trajectory, raising a central question: how do such perturbations affect generated output? To address this question, we develop a theoretical framework to investigate perturbation propagation, combining dynamical analysis of the sampling process with an information-theoretic characterization of output responses. Within this framework, we quantify perturbation strength using the Kullback--Leibler (KL) divergence between perturbed and reference trajectory distributions, termed as path cost, which is shown to bound, but do not determine, changes in the output distribution. Building on this analysis, we derive a response identity that connects the propagation and accumulation of local perturbations with the information captured by a selected feature mean, explaining why changes in the output distribution can remain undetected by its first-order response. We test our theoretical analysis through controlled interventions at equal path cost in pretrained diffusion models, revealing distinct patterns of output sensitivity across sampling stages and spatial frequencies. To assess whether our framework can diagnose perturbations arising from practical approximations, we apply it to cache-based acceleration and show that our propagation analysis reliably identifies sampling intervals where caching causes larger image errors.

  • 4 authors
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Oct 7

Probing the Black Hole Singularity with a Quantum String

In this paper, we investigate the quantum behaviour near the classical singularity of a black hole. We describe the black-hole interior by the Kantowski-Sachs metric, with a string propagating in this region. This approach is motivated by the fact that, near the classical singularity, spacetime curvature reaches Planck or string scales, necessitating a description in terms of string-theoretic degrees of freedom. The string dynamics is formulated via the Polyakov action, and the combined system is canonically quantized to derive the corresponding Wheeler-DeWitt equation. Although the equation is separable in the radial and azimuthal string sectors, the remaining geometric and string degrees of freedom are nontrivially coupled. To address this, we employ a perturbative approach and obtain the wave function up to first order. At the zeroth-order, the angular part is described by the general Heun function, while the geometric part is expressed in terms of the Bessel function. The first-order wave function is governed by a source term containing the zeroth-order solution, and we obtain its explicit expression in terms of the complementary function and the particular integral. We confirm regularity of the wave function at both zeroth and first order, at the singularity as well as at the horizon. Regularity at the horizon imposes a discretization condition on one eigenvalue, while another eigenvalue is quantized due to the azimuthal periodicity of the wave function. Importantly, both zeroth- and first-order solutions satisfy the DeWitt boundary condition, implying resolution of the black hole singularity within this quantum framework.

  • 2 authors
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Oct 6

An Exactly Solvable Ekman Layer with a Fractional-Order Stress Closure

The classical theory of the wind-driven surface layer of a rotating ocean closes the momentum balance with a local flux-gradient law, in which the turbulent stress at a given depth is proportional to the shear at that depth. It predicts a surface current deflected forty-five degrees from the wind, which exceeds most direct measurements. This study asks what follows when locality is relaxed. Beginning from the exact integral relation between turbulent stress and mean shear, and requiring the memory kernel to carry no preferred vertical scale, we obtain a power-law kernel and therefore a stress law of fractional order. The resulting equation cannot be posed on the velocity, because the fractional derivative of a bounded profile vanishes at the surface, so the wind stress cannot be applied, while the alternative definition of the derivative leaves the surface current unbounded. Posed on the stress instead, the problem is solvable in closed form in Mittag-Leffler functions at every order between zero and one. The surface deflection then depends on the closure order alone and is smaller than forty-five degrees throughout, whereas the depth-integrated transport stays exactly normal to the wind, because that constraint follows from the momentum balance and not from the closure. The far field decays as a power law rather than exponentially, and its amplitude vanishes in the local limit, so that limit is singular. Under a suddenly applied stress the surface transient decays algebraically. Three independent algorithms agree closely, and no observational or model data are used.

  • 6 authors
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Sep 18

On the Second-Order Positive Burgers' Equation: Integrability, Lax Pair, Darboux Transformations, and Lie Symmetry Reduction

This paper derives the second-order positive Burgers' equation from the standard Burgers' hierarchy to explore its complete integrability and exact analytical solutions. We construct this higher-order nonlinear evolution equation by systematically applying the recursion operator to the classical Burgers' equation. Expanding on this structural framework, we then derive the explicit third-order equation and use Complete Bell Polynomials to generalize the n-th order hierarchy. Through the Cole-Hopf transformation, the second-order nonlinear equation rigorously maps to the linear third-order dispersion equation. We establish complete integrability by explicitly formulating the scalar Lax pair (zero-curvature representation), which allows us to directly derive the associated differential and algebraic Darboux transformations. To systematically classify explicit stationary, time-dependent traveling wave, and self-similar profiles, we apply several techniques to the linear domain: separation of variables, the Hirota perturbation method, traveling wave reduction via the Complete Discrimination System for Polynomial Method (CDSPM), and Lie similarity reduction. Crucially, our analysis demonstrates the exact finite truncation of the Hirota perturbation series. We conclude by outlining how this equation impacts the theoretical understanding of fluid dynamics, nonlinear transport phenomena, and higher-order wave propagation.

  • 2 authors
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Aug 12

Spectral-Aware Analytic Class-Incremental Learning for Long-Tailed Distributions

Analytic Continual Learning (ACL) offers a computationally efficient alternative to gradient-based approaches. Recent ACL methods are based on Recursive Least Squares (RLS) and have achieved the state-of-the-art results compared to other alternatives. However, they falter significantly in Class-Incremental Learning scenarios characterized by Long-Tailed distributions. While the ill-conditioning of the autocorrelation (Gram) matrix is a known limitation of RLS, we demonstrate that class imbalance exacerbates this issue into a distinct spectral pathology: "tail" classes suffer from severe spectral collapse, rendering their subspaces numerically indistinguishable from noise. Standard Ridge Regression (L_2) fails to address this effectively as it applies isotropic regularization - a uniform penalty that is insufficient to stabilize the tail without over-shrinking the head. To address this, we propose Geometry-Spectral Rectification (GSR), a theoretically grounded framework that treats long-tailed learning as a spectral regularization problem. Unlike standard isotropic regularization (Ridge) which uniformly penalizes all eigenvalues, GSR acts as an anisotropic spectral filter, selectively inflating the collapsed eigenvalues of tail classes. We construct a structured, data-dependent spectral perturbation matrix Δ that selectively inflates collapsed tail eigen-directions of the Gram matrix. Theoretical analysis proves that GSR guarantees an improved stable rank for the Gram matrix, ensuring numerical stability. Extensive experiments show that GSR establishes a new state-of-the-art for analytic CIL, offering a superior trade-off between computational efficiency and robust generalization in long-tailed settings.

  • 7 authors
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Jul 23

JAWS: Enhancing Long-term Rollout of Neural Operators via Spatially-Adaptive Jacobian Regularization

Data-driven surrogate models improve the efficiency of simulating continuous dynamical systems, yet their autoregressive rollouts are often limited by instability and spectral blow-up. While global regularization techniques can enforce contractive dynamics, they uniformly damp high-frequency features, introducing a contraction-dissipation dilemma. Furthermore, long-horizon trajectory optimization methods that explicitly correct drift are bottlenecked by memory constraints. In this work, we propose Jacobian-Adaptive Weighting for Stability (JAWS), a probabilistic regularization strategy designed to mitigate these limitations. By framing operator learning as Maximum A Posteriori (MAP) estimation with spatially heteroscedastic uncertainty, JAWS dynamically modulates the regularization strength based on local physical complexity. This allows the model to enforce contraction in smooth regions to suppress noise, while relaxing constraints near singular features to preserve gradients, effectively realizing a behavior similar to numerical shock-capturing schemes. Experiments demonstrate that this spatially-adaptive prior serves as an effective spectral pre-conditioner, which reduces the base operator's burden of handling high-frequency instabilities. This reduction enables memory-efficient, short-horizon trajectory optimization to match or exceed the long-term accuracy of long-horizon baselines. Evaluated on the 1D viscous Burgers' equation, our hybrid approach improves long-term stability, shock fidelity, and out-of-distribution generalization while reducing training computational costs.

  • 2 authors
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Mar 4

DRIFT: Disentangled Responsive-Invariant Flow Transport for Single-Cell Perturbation Prediction

Predicting cellular responses to perturbations is a central problem in cellular biology, with broad applications in systems biology and drug discovery. This task is challenging because cellular responses can be complex and cell-state dependent, intrinsic cell-to-cell variability can be confounded with perturbation effects, and destructive single-cell RNA sequencing precludes paired measurements of the same cell before and after treatment. Flow matching transports control cells to perturbed states flexibly, but acting on the full cell state can confound perturbation effects with pre-existing cell-to-cell variability. Disentangled approaches separate responsive from invariant components, but model perturbations through prescribed mechanisms, such as latent shifts or graph edits, limiting their flexibility. We address both limitations in a unified framework. A variational encoder disentangles each cell into an invariant block, capturing state unaffected by the perturbation, and a responsive block, capturing state it changes, through conditional priors and an information-theoretic invariance constraint. Conditional flow matching transports only the responsive block, conditioned on the perturbation and invariant state, yielding a flexible, data-driven model of perturbation effects without confounding pre-existing variability. Across several benchmarks, our method outperforms the strongest published method in settings involving combinatorial and unseen perturbation prediction.

  • 3 authors
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Sep 27

Robustifying State-space Models for Long Sequences via Approximate Diagonalization

State-space models (SSMs) have recently emerged as a framework for learning long-range sequence tasks. An example is the structured state-space sequence (S4) layer, which uses the diagonal-plus-low-rank structure of the HiPPO initialization framework. However, the complicated structure of the S4 layer poses challenges; and, in an effort to address these challenges, models such as S4D and S5 have considered a purely diagonal structure. This choice simplifies the implementation, improves computational efficiency, and allows channel communication. However, diagonalizing the HiPPO framework is itself an ill-posed problem. In this paper, we propose a general solution for this and related ill-posed diagonalization problems in machine learning. We introduce a generic, backward-stable "perturb-then-diagonalize" (PTD) methodology, which is based on the pseudospectral theory of non-normal operators, and which may be interpreted as the approximate diagonalization of the non-normal matrices defining SSMs. Based on this, we introduce the S4-PTD and S5-PTD models. Through theoretical analysis of the transfer functions of different initialization schemes, we demonstrate that the S4-PTD/S5-PTD initialization strongly converges to the HiPPO framework, while the S4D/S5 initialization only achieves weak convergences. As a result, our new models show resilience to Fourier-mode noise-perturbed inputs, a crucial property not achieved by the S4D/S5 models. In addition to improved robustness, our S5-PTD model averages 87.6% accuracy on the Long-Range Arena benchmark, demonstrating that the PTD methodology helps to improve the accuracy of deep learning models.

  • 5 authors
·
Oct 2, 2023

Global strong solutions to the 1D full compressible Navier--Stokes equations with temperature-dependent coefficients and vacuum

We study the initial--boundary value problem for the one-dimensional full compressible Navier--Stokes system whose viscosity and heat conductivity are given by μ(θ)=μθ^α and κ(θ)=κθ^β, respectively. The initial density is nonnegative and is allowed to vanish. For α>2 and β>2α+4, we prove the existence of a global strong solution for arbitrarily large compatible H^2 data, provided that the prescribed boundary temperature is sufficiently high relative to their size. No velocity or temperature perturbation is required to shrink as the boundary temperature tends to infinity. A shifted initial-layer weight and an exact symmetrization of the two material-derivative equations separate the fast thermal mode from the momentum mode. The resulting estimates are uniform with respect to the positive lower bound used in the approximation and therefore survive the limit to genuine vacuum. The proof further combines a relative-entropy identity centered at the conserved mean density, the physical effective viscous flux, a Zlotnik-type estimate along particle trajectories, and finite-time transport estimates for the density derivatives. The density remains uniformly bounded and the temperature stays uniformly comparable with the prescribed boundary temperature. After the initial layer we establish vacuum-compatible exponential relaxation: the density converges to its conserved mean in every finite L^p, the velocity and temperature perturbation decay in H^1, and the weighted material-derivative energy decays at rate cbarθ^{1-α}.

  • 3 authors
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Oct 3

Dominant Shuffle: A Simple Yet Powerful Data Augmentation for Time-series Prediction

Recent studies have suggested frequency-domain Data augmentation (DA) is effec tive for time series prediction. Existing frequency-domain augmentations disturb the original data with various full-spectrum noises, leading to excess domain gap between augmented and original data. Although impressive performance has been achieved in certain cases, frequency-domain DA has yet to be generalized to time series prediction datasets. In this paper, we found that frequency-domain augmentations can be significantly improved by two modifications that limit the perturbations. First, we found that limiting the perturbation to only dominant frequencies significantly outperforms full-spectrum perturbations. Dominant fre quencies represent the main periodicity and trends of the signal and are more important than other frequencies. Second, we found that simply shuffling the dominant frequency components is superior over sophisticated designed random perturbations. Shuffle rearranges the original components (magnitudes and phases) and limits the external noise. With these two modifications, we proposed dominant shuffle, a simple yet effective data augmentation for time series prediction. Our method is very simple yet powerful and can be implemented with just a few lines of code. Extensive experiments with eight datasets and six popular time series models demonstrate that our method consistently improves the baseline performance under various settings and significantly outperforms other DA methods. Code can be accessed at https://kaizhao.net/time-series.

  • 4 authors
·
May 25, 2024

On the transmission of floating-point perturbations in flow-dependent filter-width formulations in Large-Eddy Simulation

Heterogeneous high--performance computing architectures expose numerical algorithms to perturbations arising from the non--associativity of floating--point arithmetic. In Large--Eddy Simulation (LES), similar numerical effects may become relevant when they affect the filter--width entering the subgrid scale (SGS) model. This work investigates this mechanism for the least--squares (LSQ) based filter--width formulation, focusing on how floating--point effects are generated, transmitted, and coupled with the resolved flow. We show that, for fixed resolved kinematics, the LSQ filter--width is logarithmically non-expansive but not strictly contractive with respect to perturbations of the mesh metrics. Consequently, small disturbances may be transmitted with little attenuation through strongly directional filter-width responses. To mitigate this sensitivity, we introduce a scalar max--min compression of the directional mesh scales together with a bounded modulation based on the resolved velocity gradient. The resulting formulation reroutes floating--point perturbations through the filter-width operator, improving robustness while preserving the flow--dependent character of the original LSQ construction. The framework is assessed on heterogeneous CPU and GPU architectures for flow past a circular cylinder at Re=3900 and the Taylor--Green vortex at Re=1600. In the former, nearly one--to--one transmission of relative metric disturbances can become relevant when the transmitted perturbations interact with shear-layer transition. By contrast, on orthogonal Taylor--Green vortex grids, the accumulation pathway is structurally absent and no comparable macroscopic response develops. These results suggest floating--point sensitivity matters for LES filter--width formulations in heterogeneous computing environments.

  • 4 authors
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Sep 30

PerturbBridge: Direct Phenotypic Supervision for Cellular Perturbation Generation

Virtual cell models should capture phenotypes induced by specific perturbations. However, image-based models are typically trained and evaluated to match real-image distributions, which alone does not explicitly prioritize perturbation-specific biological responses. Recent approaches add biological signals through reinforcement-learning post-training or inference-time steering, raising a central question: where should biological response information enter the generative pipeline? We introduce PerturbBridge, a stochastic data-to-data bridge model that directly supervises perturbation-specific phenotypes in predicted perturbed images during training. PerturbBridge jointly optimizes bridge regression and differentiable biological response losses, with biological gradients passing through a frozen image encoder. We further introduce perturbation-response evaluations based on downstream classification and retrieval. Across three microscopy benchmarks for perturbation profiling and subcellular imaging, PerturbBridge surpasses CellFlux in biological fidelity, image quality, and sampling efficiency. On BBBC021, mechanism-of-action classification improves by 5.66 and 7.5 percentage points with morphological and learned visual features, respectively. On JUMP and AllenCell, retrieval Hit@10 and Hit@1 improve by 1.77 and 7.15 percentage points, respectively. On BBBC021 and JUMP, PerturbBridge achieves lower FID with 80% fewer model evaluations than CellFlux. Overall, these results show that directly supervising perturbation responses during training improves phenotypic fidelity while enabling efficient cellular image generation. Code is available at https://github.com/yyc1215lll-creator/PerturbBridge.

  • 6 authors
·
Oct 11

An efficient Asymptotic-Preserving scheme for the Boltzmann mixture with disparate mass

In this paper, we develop and implement an efficient asymptotic-preserving (AP) scheme to solve the gas mixture of Boltzmann equations under the disparate mass scaling relevant to the so-called "epochal relaxation" phenomenon. The disparity in molecular masses, ranging across several orders of magnitude, leads to significant challenges in both the evaluation of collision operators and the designing of time-stepping schemes to capture the multi-scale nature of the dynamics. A direct implementation of the spectral method faces prohibitive computational costs as the mass ratio increases due to the need to resolve vastly different thermal velocities. Unlike [I. M. Gamba, S. Jin, and L. Liu, Commun. Math. Sci., 17 (2019), pp. 1257-1289], we propose an alternative approach based on proper truncation of asymptotic expansions of the collision operators, which significantly reduces the computational complexity and works well for small varepsilon. By incorporating the separation of three time scales in the model's relaxation process [P. Degond and B. Lucquin-Desreux, Math. Models Methods Appl. Sci., 6 (1996), pp. 405-436], we design an AP scheme that captures the specific dynamics of the disparate mass model while maintaining computational efficiency. Numerical experiments demonstrate the effectiveness of the proposed scheme in handling large mass ratios of heavy and light species, as well as capturing the epochal relaxation phenomenon.

  • 3 authors
·
Nov 20, 2024

Analysis of Linear Mode Connectivity via Permutation-Based Weight Matching

Recently, Ainsworth et al. showed that using weight matching (WM) to minimize the L_2 distance in a permutation search of model parameters effectively identifies permutations that satisfy linear mode connectivity (LMC), in which the loss along a linear path between two independently trained models with different seeds remains nearly constant. This paper provides a theoretical analysis of LMC using WM, which is crucial for understanding stochastic gradient descent's effectiveness and its application in areas like model merging. We first experimentally and theoretically show that permutations found by WM do not significantly reduce the L_2 distance between two models and the occurrence of LMC is not merely due to distance reduction by WM in itself. We then provide theoretical insights showing that permutations can change the directions of the singular vectors, but not the singular values, of the weight matrices in each layer. This finding shows that permutations found by WM mainly align the directions of singular vectors associated with large singular values across models. This alignment brings the singular vectors with large singular values, which determine the model functionality, closer between pre-merged and post-merged models, so that the post-merged model retains functionality similar to the pre-merged models, making it easy to satisfy LMC. Finally, we analyze the difference between WM and straight-through estimator (STE), a dataset-dependent permutation search method, and show that WM outperforms STE, especially when merging three or more models.

  • 3 authors
·
Feb 6, 2024