| library_name: pyaging | |
| tags: | |
| - pyaging | |
| - aging-clock | |
| - biology | |
| - dna-methylation | |
| # bocklandt | |
| Package-facing one-CpG identity score: pyaging returns raw cg09809672 methylation with coefficient 1 and zero intercept. The published saliva age regression instead uses EDARADD and NPTX2, including an EDARADD-squared basis term; that published age model is not implemented. | |
| Model weights retain the original authors' terms; the pyaging software license does not relicense them. | |
| | | | | |
| |---|---| | |
| | **Predicts** | EDARADD methylation | | |
| | **Species** | Homo sapiens | | |
| | **Tissue** | saliva | | |
| | **Data type** | DNA methylation | | |
| | **Model type** | single-CpG score | | |
| | **Year** | 2011 | | |
| ## Use with pyaging | |
| ```python | |
| import pyaging as pya | |
| pya.pred.predict_age(adata, ["bocklandt"]) | |
| ``` | |
| Browse every clock in the [pyaging Clock Catalogue](https://pyaging.readthedocs.io). | |
| ## Citation | |
| Bocklandt, S., Lin, W., Sehl, M.E. et al. Epigenetic predictor of age. PLoS ONE 6, e14821 (2011). | |
| https://doi.org/10.1371/journal.pone.0014821 | |