metadata
license: mit
library_name: pyaging
tags:
- pyaging
- aging-clock
- biology
- chromatin-accessibility
ocampoatac2
Alternate packaged implementation loaded from the authors' GitHub final_coefs.tsv; it represents the same uncorrected final ATAC-clock target, not a deployable cell-composition-corrected clock.
| Predicts | chronological age |
| Species | Homo sapiens |
| Tissue | peripheral blood mononuclear cells |
| Data type | chromatin accessibility |
| Model type | elastic net regression |
| Year | 2023 |
Use with pyaging
import pyaging as pya
pya.pred.predict_age(adata, ["ocampoatac2"])
Browse every clock in the pyaging Clock Catalogue.
Citation
Morandini, F. et al. ATAC-clock: An aging clock based on chromatin accessibility. GeroScience 46, 635-650 (2024).