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carbon-a-database-explorer

32.8 MB

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History: 19 commits

lvwerra's picture

lvwerra HF Staff

Genome Atlas: expanding Sankey view with annotated / not-annotated bars

a0fc0a6 verified 2 days ago

data
Suggest assemblies with many indexed segments across all six divisions 4 days ago
tests
Genome Atlas: expanding Sankey view with annotated / not-annotated bars 2 days ago
.gitattributes

1.58 kB
Add GenBank assembly taxonomy tab and refreshable SQLite snapshot 9 days ago
.gitignore

39 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 9 days ago
FEATURE_BACKLOG.md

12.5 kB
Genome Atlas: expanding Sankey view with annotated / not-annotated bars 2 days ago
README.md

16.6 kB
Genome Atlas: expanding Sankey view with annotated / not-annotated bars 2 days ago
app.css

6.37 kB
Rename Data Bank to Database throughout the Space 2 days ago
app.py

15.8 kB
Rename Data Bank to Database throughout the Space 2 days ago
atlas.css

4.94 kB
Genome Atlas: expanding Sankey view with annotated / not-annotated bars 2 days ago
atlas.js

2.03 kB
Genome Atlas: expanding Sankey view with annotated / not-annotated bars 2 days ago
benchmark_remote.py

2.48 kB
Add SQLite accession index and bounded on-demand bucket retrieval 9 days ago
build_full_index.py

10.8 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
build_index.py

6.02 kB
Add SQLite accession index and bounded on-demand bucket retrieval 9 days ago
build_snapshot.py

3.07 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
catalog.py

6.91 kB
Combine strand decisions into one binary CDS track with background ties 9 days ago
catalog_snapshot.py

1.95 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
compact_index.py

4.59 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
coverage_from_index.py

2.04 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
list_annotation_objects.py

1.36 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
merge_full_index.py

4.77 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
prepare_sample.py

3.89 kB
Deploy initial accession explorer with a bounded GenBank annotation sample 9 days ago
refresh_coverage.py

9.32 kB
Color GenBank taxonomy by published annotation coverage 9 days ago
refresh_taxonomy.py

7.96 kB
Color GenBank taxonomy by published annotation coverage 9 days ago
remote_catalog.py

9.65 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
requirements-data.txt

44 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 9 days ago
requirements.txt

121 Bytes
Add adjustable binary CDS viewer and schema-validation backlog item 9 days ago
style.py

3.93 kB
Carry the genome atlas style through the annotation workspace 9 days ago
taxonomy.py

20.3 kB
Genome Atlas: expanding Sankey view with annotated / not-annotated bars 2 days ago