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carbon-a-database-explorer

41.4 MB

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2 contributors

History: 30 commits

lvwerra's picture

lvwerra HF Staff

Show the distribution of probabilities per column, not their mean

18f776e verified 2 days ago

data
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 3 days ago
tests
Show the distribution of probabilities per column, not their mean 2 days ago
.gitattributes

1.58 kB
Add GenBank assembly taxonomy tab and refreshable SQLite snapshot 10 days ago
.gitignore

39 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 10 days ago
FEATURE_BACKLOG.md

13 kB
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 3 days ago
README.md

20 kB
Drop the breadcrumb, the collapse button, and two shortcuts (#9) 3 days ago
app.css

7.48 kB
Stop preselecting a search match, and make the Database jump look like a jump (#8) 3 days ago
app.py

18.5 kB
Show the distribution of probabilities per column, not their mean 2 days ago
atlas.css

5.61 kB
Drop the breadcrumb, the collapse button, and two shortcuts (#9) 3 days ago
atlas.js

3.05 kB
Lift captions over the ribbons, light the inflowing flux, move counts to the tooltip (#5) 3 days ago
benchmark_remote.py

2.48 kB
Add SQLite accession index and bounded on-demand bucket retrieval 10 days ago
build_full_index.py

10.8 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
build_index.py

6.02 kB
Add SQLite accession index and bounded on-demand bucket retrieval 10 days ago
build_snapshot.py

3.07 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
catalog.py

8.53 kB
Show the distribution of probabilities per column, not their mean 2 days ago
catalog_snapshot.py

1.95 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
compact_index.py

4.59 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
coverage_from_index.py

2.04 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
list_annotation_objects.py

1.36 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
merge_full_index.py

4.77 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
prepare_sample.py

3.89 kB
Deploy initial accession explorer with a bounded GenBank annotation sample 10 days ago
refresh_assemblies.py

4.45 kB
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 3 days ago
refresh_common_names.py

13.6 kB
Turn the Sankey down the page and add lineage shortcuts (#4) 3 days ago
refresh_coverage.py

9.32 kB
Color GenBank taxonomy by published annotation coverage 10 days ago
refresh_icons.py

11.6 kB
Lift captions over the ribbons, light the inflowing flux, move counts to the tooltip (#5) 3 days ago
refresh_taxonomy.py

7.96 kB
Color GenBank taxonomy by published annotation coverage 10 days ago
remote_catalog.py

9.65 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 5 days ago
requirements-data.txt

44 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 10 days ago
requirements.txt

121 Bytes
Add adjustable binary CDS viewer and schema-validation backlog item 10 days ago
style.py

3.93 kB
Carry the genome atlas style through the annotation workspace 10 days ago
taxonomy.py

33.5 kB
Keep the match list and the chart in step (#10) 3 days ago