ReLiSS / README.md
wanghekai's picture
Document inference, evaluation, weights and logs release scope
1a2ec73 verified
|
Raw History Blame Contribute Delete
1.96 kB
---
language:
- en
- zh
license: mit
library_name: pytorch
pipeline_tag: image-segmentation
tags:
- medical-imaging
- mri
- missing-modality
- brats
- isles
- wmh
---
# ReLiSS
Inference, evaluation, completed-run logs and fixed data splits:
[hekaiwang/ReLiSS](https://github.com/hekaiwang/ReLiSS).
Training code and the complete experiment pipeline are not included in this release.
| Dataset | Protocol | Checkpoints | Channel order |
|---|---|---|---|
| BraTS2021 | Five folds, 1,251 subjects | fold 0–4, best | T1, T1ce, T2, FLAIR |
| ISLES2022 | Five folds, 250 subjects | fold 0–4, final | FLAIR, ADC, DWI |
| WMH2017 | Official 60 train / 110 test | fold all, final | FLAIR, T1 |
This repository contains eleven training checkpoints, matching plans,
dataset metadata and splits. WMH uses the official train/test protocol; the
training split file does not imply five released WMH models.
`weights_manifest.json` and `SHA256SUMS` record checkpoint sizes and SHA-256.
The checkpoint tensors and training state are preserved. The trainer
folder name is `nnUNetTrainerReLiSS_300epochs`; the supplied inference
script directly constructs the matching network and loads its state dictionary.
## Download
From the installed code repository:
```bash
source scripts/env.sh
python scripts/download_weights.py --repo wanghekai/ReLiSS \
--revision COMMIT_HASH --output "$nnUNet_results"
```
Replace `COMMIT_HASH` with the immutable model revision in the code repository's
`docs/WEIGHTS.md`. The downloader fetches exactly eleven weights and verifies
sizes and hashes. Follow the code README for held-out inference and evaluation.
For cross-validation, use each subject's held-out fold. Missing channels are
zeroed after full-input preprocessing; the released protocol uses a shared crop.
Project code and model release are MIT licensed. Dataset and dependency terms
remain separate. Obtain MRI data and reference masks from their authorized
sources.