sentence-transformers How to use yoyo458/BioBERT_GOUniProt_FineTuned with sentence-transformers:
from sentence_transformers import SentenceTransformer
model = SentenceTransformer("yoyo458/BioBERT_GOUniProt_FineTuned")
sentences = [
"metalloendopeptidase activity",
"Cysteine protease. May have an important role in corneal physiology. .",
"Metalloprotease (PubMed:16585064, PubMed:39672391). Was previously shown to degrade COMP (PubMed:16585064). However, a later study found no activity against COMP (PubMed:39672391). .",
"Degrades casein, gelatins of types I, III, IV, and V, and fibronectin. Activates procollagenase. ."
]
embeddings = model.encode(sentences)
similarities = model.similarity(embeddings, embeddings)
print(similarities.shape)
# [4, 4] 
