Download records/source_goal/pairing_semantics_audit.json from Boom5426/VCDesign: direct link, hf CLI and curl.
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5.55 kB
| { | |
| "frozen_cache": { | |
| "identity_axis_sha256": "c6765f386d066ec731442316c88395acee2ab6fbef009a5a2fd59696b738b6fd", | |
| "path": "inputs/responses_ab.npy", | |
| "sha256": "bb48bae7f864c66b242a77cef064ff967b418d22bb11416630548f6a6d094a94", | |
| "shape": [ | |
| 2, | |
| 9205, | |
| 8248 | |
| ] | |
| }, | |
| "gate_decision": "PASS: `view_specific_batch_weighted` reproduces every sampled FIT/SELECT delta element at atol=1e-05, rtol=1e-05. Gate 2 may materialize quarantined endpoint assets using this exact recipe, then must validate the invariant on all identities before release.", | |
| "pairing_statement": "Each endpoint candidate has a deterministic perturbation pseudobulk goal in each A/B batch-disjoint view. The source candidate is a deterministic weighted mixture of batch-specific control pseudobulks; this audit tests whether its weights are pooled across views or restricted to the endpoint view.", | |
| "raw": { | |
| "aggregation": "per-cell library-size 10000 then log1p; mean pseudobulk", | |
| "gene_order_exact_match": true, | |
| "path": "PUBLIC_SOURCE/ReplogleWeissman2022_K562_gwps.h5ad", | |
| "sha256": "d3269d9c863d96555eba768b42ab330cc1b57493cd33b4ac8fe7fbab8278f104", | |
| "shape": [ | |
| 1989578, | |
| 8248 | |
| ] | |
| }, | |
| "sample": { | |
| "count": 64, | |
| "identities": [ | |
| "OSBPL8", | |
| "SSX4", | |
| "ZNF576", | |
| "NFE2L1", | |
| "NRIP1", | |
| "SEC16A", | |
| "CSNK1A1", | |
| "CRADD", | |
| "SYVN1", | |
| "SPATA2L", | |
| "DNAJC30", | |
| "UPRT", | |
| "TLE3", | |
| "ARGFX", | |
| "IFT80", | |
| "ZSCAN23", | |
| "MLF2", | |
| "LARP4", | |
| "HIST1H2BL", | |
| "GEMIN7", | |
| "TKT", | |
| "ERVW-1", | |
| "C14orf178", | |
| "ZNF384", | |
| "NOTUM", | |
| "GAA", | |
| "BTBD10", | |
| "COX16", | |
| "MAP1LC3B", | |
| "ATF6", | |
| "PPP2R3B", | |
| "EBAG9", | |
| "SRP72", | |
| "EIF2B5", | |
| "L3HYPDH", | |
| "OTP", | |
| "OTX2", | |
| "ENTR1", | |
| "DCPS", | |
| "TICRR", | |
| "TAX1BP3", | |
| "COCH", | |
| "ZFPL1", | |
| "GNA13", | |
| "ZNF442", | |
| "VENTX", | |
| "ZBTB40", | |
| "STX6", | |
| "SMG6", | |
| "MTMR4", | |
| "RELA", | |
| "BBC3", | |
| "MOK", | |
| "CTPS2", | |
| "PSMC1", | |
| "ZNF48", | |
| "ATP1A1", | |
| "RAP2B", | |
| "DARS", | |
| "PIN4", | |
| "MIF", | |
| "ARL6IP1", | |
| "TASOR2", | |
| "CWC15" | |
| ], | |
| "roles": [ | |
| "G_fit", | |
| "G_select" | |
| ], | |
| "selection": "SHA-256 deterministic identity order with salt SOURCE_GOAL_ASSET_RESOLUTION_V1|20260916" | |
| }, | |
| "sampled_cache_recipe_comparison": { | |
| "all_batch_weighted": { | |
| "A": { | |
| "all_close": false, | |
| "fraction_close": 0.002911690712900097, | |
| "max_abs_error": 0.07813365560047059, | |
| "mean_abs_error": 0.0030257416010429335 | |
| }, | |
| "B": { | |
| "all_close": false, | |
| "fraction_close": 0.002907901915615907, | |
| "max_abs_error": 0.09024386034321341, | |
| "mean_abs_error": 0.003004935907370192 | |
| } | |
| }, | |
| "view_specific_batch_weighted": { | |
| "A": { | |
| "all_close": true, | |
| "fraction_close": 1.0, | |
| "max_abs_error": 1.4648724722121642e-06, | |
| "mean_abs_error": 9.106084045687916e-09 | |
| }, | |
| "B": { | |
| "all_close": true, | |
| "fraction_close": 1.0, | |
| "max_abs_error": 1.4948276128023963e-06, | |
| "mean_abs_error": 8.249161447296022e-09 | |
| } | |
| } | |
| }, | |
| "schema": "SOURCE_GOAL_ASSET_RESOLUTION_V1_GATE_1", | |
| "source_diversity": { | |
| "all_batch_weighted_shared_across_views": { | |
| "control_mean_matrix_rank": 267, | |
| "coordinate_variance_mean": 1.4186932821180593e-05, | |
| "distinct_control_mixture_profile_fraction": 1.0, | |
| "distinct_control_mixture_profiles": 9205, | |
| "distinct_source_expression_profile_fraction": 1.0, | |
| "distinct_source_expression_profiles_float32": 9205, | |
| "max_perturbations_per_control_mixture": 1, | |
| "queries": 9205, | |
| "sample_pair_count": 10000, | |
| "sample_pair_max_l2_distance": 1.3801618177203594, | |
| "sample_pair_mean_l2_distance": 0.4570262069036828, | |
| "sample_pair_median_l2_distance": 0.42392650150797745, | |
| "source_profile_identity_proven": true | |
| }, | |
| "view_A_batch_weighted": { | |
| "control_mean_matrix_rank": 267, | |
| "coordinate_variance_mean": 2.707875577707947e-05, | |
| "distinct_control_mixture_profile_fraction": 1.0, | |
| "distinct_control_mixture_profiles": 9205, | |
| "distinct_source_expression_profile_fraction": 1.0, | |
| "distinct_source_expression_profiles_float32": 9205, | |
| "max_perturbations_per_control_mixture": 1, | |
| "queries": 9205, | |
| "sample_pair_count": 10000, | |
| "sample_pair_max_l2_distance": 2.3858092804354647, | |
| "sample_pair_mean_l2_distance": 0.6300420630208424, | |
| "sample_pair_median_l2_distance": 0.5824798516784221, | |
| "source_profile_identity_proven": true | |
| }, | |
| "view_B_batch_weighted": { | |
| "control_mean_matrix_rank": 267, | |
| "coordinate_variance_mean": 2.9616065717047468e-05, | |
| "distinct_control_mixture_profile_fraction": 1.0, | |
| "distinct_control_mixture_profiles": 9205, | |
| "distinct_source_expression_profile_fraction": 1.0, | |
| "distinct_source_expression_profiles_float32": 9205, | |
| "max_perturbations_per_control_mixture": 1, | |
| "queries": 9205, | |
| "sample_pair_count": 9998, | |
| "sample_pair_max_l2_distance": 2.2753692170298243, | |
| "sample_pair_mean_l2_distance": 0.6546830657966001, | |
| "sample_pair_median_l2_distance": 0.6043989240791572, | |
| "source_profile_identity_proven": true | |
| } | |
| }, | |
| "status": "GATE_1_PASS_PAIRING_SEMANTICS_RESOLVED", | |
| "tolerance": { | |
| "atol": 1e-05, | |
| "rtol": 1e-05 | |
| } | |
| } | |