checkpoint_KKG / README.md
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Dataset card: fix the ablation step
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metadata
license: other
license_name: original-source-licences
pretty_name: KGGuard+W checkpoints and reproduction artifacts
tags:
  - knowledge-graph
  - error-detection
  - fact-checking
  - reproducibility
language:
  - en
size_categories:
  - 1K<n<10K

KGGuard+W: checkpoints and reproduction artifacts

This repository holds every artifact needed to reproduce the results of KGGuard+W, a method that detects erroneous facts in knowledge graphs. It covers DBpedia Accuracy and FactBench. Code: GitHub coderkhongodo/KGG (see its README).

KGGuard+W does not train a neural network of its own. Seven label-free evidence sources are calibrated into log-likelihood ratios around a hierarchical predicate prior, then combined by a cross-fitted, monotone boosted GAM:

  • C: SHACL constraints
  • S: structural anomaly (Isolation Forest)
  • S_sup: relation-conditional structural support
  • M: sentence similarity
  • T: text mention
  • N: NLI on entity descriptions
  • W: NLI on retrieved web passages

The learned state, i.e. the "checkpoint", is the fitted fusion model. Missing evidence contributes exactly 0, and per-source contributions are exact.

Contents

Path What
checkpoints/<dataset>/<run>/kgguard_plus_w_seed<s>.joblib final fusion model (KGGuard+W) per dataset × run × seed; .json = readable description
checkpoints/<dataset>/<run>/kgguard_plus_kg_only_seed<s>.joblib the same model without web evidence (KGGuard+)
checkpoints/verified_metrics.csv test metrics of every checkpoint; they equal the reported ones (refit check ≤ 1e-9)
outputs/<dataset>/<run>/scores/ every cached evidence and baseline score, including LLM zero-shot, FactCheck (DKA, GIV-F, RAG, consensus), TransE, ComplEx, CAGED, PaTyBRED, SDValidate
data/raw, data/interim, data/interim_ms raw and processed facts, frozen splits, context graphs; interim_ms = the 5 fresh splits
data/cache SPARQL / HTTP responses, encoder embeddings, NLI and LLM / FactCheck answers, retrieved web passages
reference/<dataset>/<run>/ reported results (E1–E7) used for comparison; reference/summaries/: multi-split, robustness, label efficiency, paper tables
explanations/<dataset>/<run>/ alert lists with per-source explanations, test predictions
MANIFEST.json sha256 of every file, library versions, code commit

Runs:

  • v7 is the design split, with seeds 13, 42 and 2027.
  • ms7_s101 … ms7_s505 are five fresh grouped splits, each with seed 13.

Reproduce

git clone https://github.com/coderkhongodo/KGG.git && cd KGG
pip install -e ".[dev,hf]"
PYTHONPATH=src python scripts/reproduce_from_hf.py --local-dir hf_checkpoint --full-e1 --ablation

The script:

  1. downloads this repository and verifies every file against MANIFEST.json;
  2. reloads every checkpoint, scores the test facts and compares AP, AUROC, F1 and BAcc with the reported values;
  3. refits every model from the downloaded scores and compares again;
  4. with --full-e1, re-runs the full main comparison (all baselines, 3 seeds, bootstrap);
  5. with --ablation, re-runs the ablation of the proposed method (15 variants, design split and 5 fresh splits).

No network access, LLM or GPU is needed.

Verified on a fresh clone with an anonymous download, on CPU (32 threads):

Check Result
sha256 of all 3,860 files 0 mismatches
32 checkpoints, inference AP / AUROC / F1 / BAcc identical (0 difference)
32 checkpoints, retrained from the downloaded scores identical
full E1 (29 methods x 3 seeds x 2 datasets) identical
ablation (240 rows) identical

Checkpoints are pickles (joblib). Load them only if you trust the source, preferably with the same scikit-learn version:

  • Python 3.12
  • scikit-learn 1.9.1
  • numpy 2.5.4
  • pandas 3.1.1

Main results (test AP, mean of 3 seeds)

DBpedia Accuracy FactBench
best published baseline 0.257 (LLM zero-shot) 0.834 (FactCheck-RAG)
CAGED (CIKM'22) 0.142 0.533
KGGuard+W 0.470 0.928

Data sources and licences

Redistributed for reproducibility, under the licences of the original sources:

  • DBpedia Accuracy (Marchesin, Silvello, Alonso, HCOMP 2024) and DBpedia context data: CC BY-SA.
  • FactBench (DeFacto, AKSW).
  • Web passages retrieved from the FactCheck corpus (SIGIR'25 / EDBT'26).

Please cite the original datasets when you use them.