Add files using upload-large-folder tool

gdl_ct/128x128x64/gdl_0016_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
+x,32,0.25,0.53052
+x,64,0.5,0.54004
+x,95,0.75,0.55737
+y,32,0.25,0.54993
+y,64,0.5,0.54297
+y,95,0.75,0.66443
+z,16,0.25,0.56891
+z,32,0.5,0.63672
+z,47,0.75,0.52631

gdl_ct/128x128x64/gdl_0016_throat_dist.csv

@@ -0,0 +1,548 @@
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gdl_ct/128x128x64/gdl_0017.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
+  "shape": [
+    128,
+    128,
+    64
+  ],
+  "crop_shape_zyx": [
+    64,
+    128,
+    128
+  ],
+  "origin_zyx": [
+    17,
+    409,
+    525
+  ],
+  "bob_transpose": [
+    1,
+    2,
+    0
+  ],
+  "orientation": "slab (z, y, x) crop transposed (1, 2, 0) to bob porous3d default: flow axis x = last axis = GDL through-plane; x = 0 is slab z = origin",
+  "pre_opening_porosity": 0.62601,
+  "post_opening_porosity": 0.48335,
+  "closed_pore_voxels": 3546,
+  "post_fill_porosity": 0.47997,
+  "porosity_post": 0.47997,
+  "stats": {
+    "post_processing": {
+      "description": "ball(3) morphological opening of the pore space (closes throats with inscribed-sphere radius < 3 vox) + fill of face-disconnected dead pore pockets",
+      "opening_radius_vox": 3,
+      "closed_pore_voxels": 3546
+    },
+    "porosity": 0.47997,
+    "percolates_flow_axis": true,
+    "n_pores": 241,
+    "n_throats": 479,
+    "throat_inscribed_radius_vox": {
+      "n": 479,
+      "mean": 3.615,
+      "std": 1.575,
+      "min": 1.0,
+      "p10": 1.414,
+      "p25": 2.828,
+      "median": 3.606,
+      "p75": 4.583,
+      "p90": 5.477,
+      "max": 9.11
+    },
+    "pore_inscribed_radius_vox": {
+      "n": 241,
+      "mean": 4.419,
+      "std": 1.653,
+      "min": 1.732,
+      "p10": 2.828,
+      "p25": 3.162,
+      "median": 4.123,
+      "p75": 5.385,
+      "p90": 6.708,
+      "max": 9.381
+    },
+    "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry"
+  }
+}

gdl_ct/128x128x64/gdl_0017_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
+x,32,0.25,0.47644
+x,64,0.5,0.46863
+x,95,0.75,0.39807
+y,32,0.25,0.45825
+y,64,0.5,0.44934
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+z,16,0.25,0.56842
+z,32,0.5,0.49622
+z,47,0.75,0.28247

gdl_ct/128x128x64/gdl_0017_throat_dist.csv

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gdl_ct/128x128x64/gdl_0018.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
+  "shape": [
+    128,
+    128,
+    64
+  ],
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+  ],
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+  ],
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+  "pre_opening_porosity": 0.6738,
+  "post_opening_porosity": 0.56423,
+  "closed_pore_voxels": 246,
+  "post_fill_porosity": 0.564,
+  "porosity_post": 0.564,
+  "stats": {
+    "post_processing": {
+      "description": "ball(3) morphological opening of the pore space (closes throats with inscribed-sphere radius < 3 vox) + fill of face-disconnected dead pore pockets",
+      "opening_radius_vox": 3,
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+    },
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+    },
+    "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry"
+  }
+}

gdl_ct/128x128x64/gdl_0018_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
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gdl_ct/128x128x64/gdl_0018_throat_dist.csv

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gdl_ct/128x128x64/gdl_0019.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
+  "shape": [
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+  "pre_opening_porosity": 0.69975,
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+  "closed_pore_voxels": 359,
+  "post_fill_porosity": 0.59939,
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+  "stats": {
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+    "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry"
+  }
+}

gdl_ct/128x128x64/gdl_0019_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
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gdl_ct/128x128x64/gdl_0019_throat_dist.csv

@@ -0,0 +1,567 @@
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gdl_ct/128x128x64/gdl_0020.json

@@ -0,0 +1,66 @@
+{
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+  }
+}

gdl_ct/128x128x64/gdl_0020_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
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gdl_ct/128x128x64/gdl_0020_throat_dist.csv

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gdl_ct/128x128x64/gdl_0021.json

@@ -0,0 +1,66 @@
+{
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+  "voxel_size_um": 2.05,
+  "shape": [
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+  "stats": {
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+  }
+}

gdl_ct/128x128x64/gdl_0021_slices.csv

@@ -0,0 +1,10 @@
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gdl_ct/128x128x64/gdl_0021_throat_dist.csv

@@ -0,0 +1,804 @@
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gdl_ct/128x128x64/gdl_0022.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
+  "shape": [
+    128,
+    128,
+    64
+  ],
+  "crop_shape_zyx": [
+    64,
+    128,
+    128
+  ],
+  "origin_zyx": [
+    79,
+    416,
+    85
+  ],
+  "bob_transpose": [
+    1,
+    2,
+    0
+  ],
+  "orientation": "slab (z, y, x) crop transposed (1, 2, 0) to bob porous3d default: flow axis x = last axis = GDL through-plane; x = 0 is slab z = origin",
+  "pre_opening_porosity": 0.65366,
+  "post_opening_porosity": 0.54164,
+  "closed_pore_voxels": 2844,
+  "post_fill_porosity": 0.53892,
+  "porosity_post": 0.53892,
+  "stats": {
+    "post_processing": {
+      "description": "ball(3) morphological opening of the pore space (closes throats with inscribed-sphere radius < 3 vox) + fill of face-disconnected dead pore pockets",
+      "opening_radius_vox": 3,
+      "closed_pore_voxels": 2844
+    },
+    "porosity": 0.53892,
+    "percolates_flow_axis": true,
+    "n_pores": 286,
+    "n_throats": 558,
+    "throat_inscribed_radius_vox": {
+      "n": 558,
+      "mean": 3.752,
+      "std": 1.457,
+      "min": 1.0,
+      "p10": 1.732,
+      "p25": 3.0,
+      "median": 3.742,
+      "p75": 4.583,
+      "p90": 5.745,
+      "max": 8.944
+    },
+    "pore_inscribed_radius_vox": {
+      "n": 286,
+      "mean": 4.341,
+      "std": 1.573,
+      "min": 1.414,
+      "p10": 2.236,
+      "p25": 3.162,
+      "median": 4.123,
+      "p75": 5.099,
+      "p90": 6.403,
+      "max": 9.0
+    },
+    "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry"
+  }
+}

gdl_ct/128x128x64/gdl_0022_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
+x,32,0.25,0.45996
+x,64,0.5,0.4856
+x,95,0.75,0.5376
+y,32,0.25,0.54993
+y,64,0.5,0.49976
+y,95,0.75,0.53064
+z,16,0.25,0.56689
+z,32,0.5,0.56952
+z,47,0.75,0.46185

gdl_ct/128x128x64/gdl_0022_throat_dist.csv

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gdl_ct/128x128x64/gdl_0023.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
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+  }
+}

gdl_ct/128x128x64/gdl_0023_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
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gdl_ct/128x128x64/gdl_0023_throat_dist.csv

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gdl_ct/128x128x64/gdl_0024.json

@@ -0,0 +1,66 @@
+{
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+  }
+}

gdl_ct/128x128x64/gdl_0024_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
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gdl_ct/128x128x64/gdl_0024_throat_dist.csv

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gdl_ct/128x128x64/gdl_0025.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
+  "shape": [
+    128,
+    128,
+    64
+  ],
+  "crop_shape_zyx": [
+    64,
+    128,
+    128
+  ],
+  "origin_zyx": [
+    41,
+    371,
+    255
+  ],
+  "bob_transpose": [
+    1,
+    2,
+    0
+  ],
+  "orientation": "slab (z, y, x) crop transposed (1, 2, 0) to bob porous3d default: flow axis x = last axis = GDL through-plane; x = 0 is slab z = origin",
+  "pre_opening_porosity": 0.65879,
+  "post_opening_porosity": 0.54425,
+  "closed_pore_voxels": 333,
+  "post_fill_porosity": 0.54394,
+  "porosity_post": 0.54394,
+  "stats": {
+    "post_processing": {
+      "description": "ball(3) morphological opening of the pore space (closes throats with inscribed-sphere radius < 3 vox) + fill of face-disconnected dead pore pockets",
+      "opening_radius_vox": 3,
+      "closed_pore_voxels": 333
+    },
+    "porosity": 0.54394,
+    "percolates_flow_axis": true,
+    "n_pores": 294,
+    "n_throats": 584,
+    "throat_inscribed_radius_vox": {
+      "n": 584,
+      "mean": 3.616,
+      "std": 1.487,
+      "min": 1.0,
+      "p10": 1.414,
+      "p25": 2.828,
+      "median": 3.464,
+      "p75": 4.583,
+      "p90": 5.477,
+      "max": 8.185
+    },
+    "pore_inscribed_radius_vox": {
+      "n": 294,
+      "mean": 4.416,
+      "std": 1.571,
+      "min": 1.414,
+      "p10": 2.563,
+      "p25": 3.162,
+      "median": 4.123,
+      "p75": 5.385,
+      "p90": 6.403,
+      "max": 10.392
+    },
+    "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry"
+  }
+}

gdl_ct/128x128x64/gdl_0025_slices.csv

@@ -0,0 +1,10 @@
+slice_axis,slice_index,depth_fraction,slice_porosity
+x,32,0.25,0.48279
+x,64,0.5,0.47424
+x,95,0.75,0.60095
+y,32,0.25,0.57544
+y,64,0.5,0.58691
+y,95,0.75,0.50574
+z,16,0.25,0.61462
+z,32,0.5,0.51227
+z,47,0.75,0.53705

gdl_ct/128x128x64/gdl_0025_throat_dist.csv

@@ -0,0 +1,585 @@
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gdl_ct/128x128x64/gdl_0026.json

@@ -0,0 +1,66 @@
+{
+  "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy",
+  "voxel_size_um": 2.05,
+  "shape": [
+    128,
+    128,
+    64
+  ],
+  "crop_shape_zyx": [
+    64,
+    128,
+    128
+  ],
+  "origin_zyx": [
+    49,
+    753,
+    1057
+  ],
+  "bob_transpose": [
+    1,
+    2,
+    0
+  ],
+  "orientation": "slab (z, y, x) crop transposed (1, 2, 0) to bob porous3d default: flow axis x = last axis = GDL through-plane; x = 0 is slab z = origin",
+  "pre_opening_porosity": 0.71232,
+  "post_opening_porosity": 0.62444,
+  "closed_pore_voxels": 0,
+  "post_fill_porosity": 0.62444,
+  "porosity_post": 0.62444,
+  "stats": {
+    "post_processing": {
+      "description": "ball(3) morphological opening of the pore space (closes throats with inscribed-sphere radius < 3 vox) + fill of face-disconnected dead pore pockets",
+      "opening_radius_vox": 3,
+      "closed_pore_voxels": 0
+    },
+    "porosity": 0.62444,
+    "percolates_flow_axis": true,
+    "n_pores": 273,
+    "n_throats": 643,
+    "throat_inscribed_radius_vox": {
+      "n": 643,
+      "mean": 3.854,
+      "std": 1.727,
+      "min": 1.0,
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+      "median": 3.742,
+      "p75": 5.0,
+      "p90": 6.0,
+      "max": 11.0
+    },
+    "pore_inscribed_radius_vox": {
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+      "mean": 4.484,
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+      "max": 11.0
+    },
+    "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry"
+  }
+}