vEM / README.md

Reorganise into per-dataset folders: move the j0126 affinity model to j0126/

e7c9dac verified 29 days ago

957 Bytes

license: mit
tags:
  - connectomics
  - electron-microscopy
  - 3d-segmentation
  - affinity-prediction
  - pytorch-connectomics
  - mednext

pytc/vEM — volume EM models

Checkpoints for PyTorch Connectomics, one folder per dataset. Each folder has its own README with the training recipe, the inference constraints that matter, and the measured results.

Folder	Dataset	Task	Files
`j0126/`	j0126 zebra finch, 9 × 9 × 20 nm	3-channel voxel affinity	`affinity_scratch_48x96x96.ckpt` (247 MB) · `.onnx` (247 MB, opset 17)

hf download pytc/vEM j0126/affinity_scratch_48x96x96.ckpt --local-dir ckpt/

Renamed from pytc/j0126 on 2026-09-08 and reorganised into per-dataset folders. The old repo URL redirects, but a link that pinned affinity_scratch_48x96x96.ckpt at the repo root needs the j0126/ prefix added.