metadata
library_name: pyaging
tags:
- pyaging
- aging-clock
- biology
- dna-methylation
stubbs
Mouse multi-tissue RRBS age predictor: 17,992 common input loci are normalized and reduced to 329 nonzero clock sites, then quadratically calibrated.
Model weights retain the original authors' terms; the pyaging software license does not relicense them.
| Predicts | chronological age |
| Species | Mus musculus |
| Tissue | multi-tissue, liver, lung, heart, brain cortex, skeletal muscle, cerebellum, spleen |
| Data type | DNA methylation |
| Model type | quadratically calibrated elastic net regression |
| Year | 2017 |
Use with pyaging
import pyaging as pya
pya.pred.predict_age(adata, ["stubbs"])
Browse every clock in the pyaging Clock Catalogue.
Citation
Stubbs, T. M., et al. “Multi-tissue DNA methylation age predictor in mouse.” Genome Biology 18: 68 (2017).